mRNA_L-elsbetiae_contig1767.4990.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1767.4990.1
Unique NamemRNA_L-elsbetiae_contig1767.4990.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 986 bits (2548), Expect = 0.000e+0
Identity = 620/1034 (59.96%), Postives = 689/1034 (66.63%), Query Frame = 1
Query:  289 MYLRPDSVFGVFVRRLRAALDGSSFSRLSAIYEEVVRYSDS-----LRGDASMTYALLCSW---SFRRGEQPHHRDHRYRYRNGLAPLHPSFPWLRQSSTSAAPHASIRHRPPPRGADDAQAA-GARACRSALGFRFGKCHIVETTAPRNKNKRVDFLSNSVREGSEEKMDHGIVDGGGPGGREEERLFPREVSAWQLQWRLQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------RNRASPTRVWECLAAVASGDLRGLLESEAA--SAGAGLLDXXXXXXXG-----------------------------------GGGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQVHGD----LATASNVELASACVMNAVLRGKSFPGLPESLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIKGER---EGENGECACVFEVALSVALRQHEEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRGCCPLNRGAEAFVEAHLQRVRLLRAQGR---------WSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAEVSLEDDPRPPAARTSGSSENGGAVD-ETGDDGRGGAGAEIGAGGMALRGGALKQAVLHLNRAIAMLKRCHDFAGLRECFYLRARVCEKIVSEGGESLDQAKATAERDASARDFLAVSKAGVWALLSPSPGLKIGPAEVQRYIEASMSAIPW 3159
            MYLRP+SVFGVF+RRL+ A DG+SFSRLSAIYEE+VR++ +     L G+A      +  W      RGEQ        R              +R +  S A   +     P RG+D A         R   G   G  H         +N    FL             H  V G              E+SAWQLQWRLQRKVLRLE+GLSSQ+PFEEIE EVQAALG+RSDVPKAHFLRL+NCMHHREL+GSLDSLHRYFDYAVRRGGPSMS+AEGFLD+AKGA GGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHP+AGDVLRRCASQAADLQLHQLMNS  LLLA                   XXXXXXXXX               XXXXXX              R RASPTRVWECLA +ASGDLRGLLESE    +AGAGLL        G                                   GGGRPAVELRGGTGGEVAA LSCQRLLVEAGAFERFGYSDMA ACARSVLQV        ATAS+VELASAC++NA LRGK  PGLP                                      G  GE    +GE  E  CV+ VALS+ALRQH+EFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLR CCPL++GAE+F+EAHLQ+VRLLRAQGR         W+EAV++AS+L KLSDTRGLAPQYARLLLELSRA LGAEPASPVGALPHALRCLAVCESY+LDAIHASAMTHLAEVHLRMGS+RRARILL+ACLGQLLA+APVQSQGEAWLAMA+C++AEVSL    +   A      E G  ++      G GG  A   A   A R   L++AVL+L+RAIA LKRCHDFAGLREC YL+ARVC ++VS   E+ D+ +AT ER+AS+RDFLA+SKA   AL  PSPGLKIGPAEV+RY+ ASM ++PW
Sbjct:    1 MYLRPNSVFGVFIRRLKTACDGASFSRLSAIYEELVRFTGAGVGGPLEGEAHCESQHI-HWREEELARGEQL-----TVRLEXXXXXXXXXIAEVRATLDSPAMDLASPCESPRRGSDSAGGGFPGEGARIRHGGGLGMSH---------RNPVTSFLR------------HRGVTG--------------EISAWQLQWRLQRKVLRLENGLSSQVPFEEIESEVQAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRGGPSMSNAEGFLDIAKGAQGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPKAGDVLRRCASQAADLQLHQLMNSTTLLLAQEAAVAKHGNATYGTTSSGXXXXXXXXXGDATSLSATTPGVEGXXXXXXXXXXXXXXXXXGGGRRRASPTRVWECLATMASGDLRGLLESEGGGDAAGAGLLAVPGGAGGGRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRPAVELRGGTGGEVAAWLSCQRLLVEAGAFERFGYSDMAAACARSVLQVGAADVVVAATASSVELASACMINATLRGKRLPGLPPP-----------------------------SVFCGSAGTPGEERRGDGEEDEQGCVYAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRACCPLSQGAESFIEAHLQKVRLLRAQGRQVIPQPPVRWAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAEVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGGGQSSTAVPGAGXEGGVTIEGRXXGQGTGGGPAAPAATRRARREEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSAHEEASDKYRATVERNASSRDFLAISKAVARALACPSPGLKIGPAEVRRYMSASMESVPW 964          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 767 bits (1980), Expect = 5.790e-261
Identity = 498/994 (50.10%), Postives = 564/994 (56.74%), Query Frame = 1
Query:  289 MYLRPDSVFGVFVRRLRAALDGSSFSRLSAIYEEVVRYSDSLRGDASMTYALLCSWSFRRGEQPHHRDHRYRYRNGLAPLHPS--FPWLRQSSTSAAPHASIRHRPPPRGADDAQAA----GARACRSALGFRFGKCHIVETTAPRNKNKRVDFLSNSVREGSE---EKMDHGIVDGGGPGGREEERLFPREVSAWQLQWRLQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRASPTRVWECLAAVASGDLRGLLESEAASAGAGLLDXXXXXXXGGGGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQVHGDLATASNVELASACVMNAVLRGKSFPGLPESLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIKGER---EGENGECACVFEVALSVALRQHEEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRGCCPLNRGAEAFVEAHLQRVRLLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAEVSLEDDPRPPAARTSGSSENGGAVDETGDDGRGGAGAEI-------------------------GAGGMALRGGALKQAVLHLNRAIAMLKRCHDFAGLRECFYLRARVCEKIVSEGGESLDQAKATAERDASARDFLAVSKAGVWALLSPSPGLKIGPAEVQRYIEASMSAIPW 3159
            MYLRP+SVFGVF+RRL+ A DG+SFS LSA YEE+VR++ +  G      A   S   RR E                          +R +  S A   S     P RG+D A       GAR  R   G   G  + + T+  R++ +R+D    S+ E SE   E                   LFPRE+SAWQLQWRLQRKVLRLE+GLSSQ+PFEEIE EVQAALG+RSDVPKAHFLRL+NCMHHREL+GSLDSLHRYFDYAVRRGGPSMS+AEGFLDLAKGA GGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLH                                                                                                                                                             QRLLVEAGAFERFGYSDMA ACARSVLQ+HGD+ATAS+VELASAC++NA LRGK+ PGLP                                      G  GE    +GE  E  CVF VALS+ALRQH+EFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEG                                  W+EAV++AS+L KLSDTRGLAPQYARLLLELSRA LGAEPASPVGALPHALRCLAVCESY+LDAIHASAMTHLA+VHLRMGS+RRARILL+ACLGQLLA+APVQSQGEAWLAMA+C++AEVSL            G  +   AV E G  G GG   E                           A G   RG  L++AVL+L+RAIA LKRCHDFAGLREC YL+ARVC ++VSE  E+ D+ +AT ER+AS+R+FLAVSKA   AL  PSPGLKIGPAEV+RY+ AS+ ++PW
Sbjct:    1 MYLRPNSVFGVFIRRLKTACDGASFSLLSATYEELVRFTGAGVGGPLEEEAACGSQHIRRREXXXXXXXXXXXXXXXXXXXXXXFIAEVRATLDSPAMDLSSPSESPRRGSDSAGGGFPGEGAR-IRYGGGSGMGHRNAI-TSLLRHRAERIDLPGGSLEEKSEQGGEAFHSXXXXXXXXXXXXXGGLFPREISAWQLQWRLQRKVLRLENGLSSQVPFEEIESEVQAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRGGPSMSNAEGFLDLAKGAQGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLH-------------------------------------------------------------------------------------------------------------------------------------------------------------QRLLVEAGAFERFGYSDMAAACARSVLQIHGDIATASSVELASACIINATLRGKTLPGLPPP-----------------------------PVFGGSAGTPGEERKGDGEEDEQGCVFAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEG----------------------------------WAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAQVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSL-----------GGGGQTSTAVPEAG--GEGGVTIEXXXXXXXXXXRXXXXXPAAPAALSGPAATGRVRRGEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSEHEEASDKYRATVERNASSREFLAVSKAVARALACPSPGLKIGPAEVRRYMSASVESVPW 759          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: W7U440_9STRA (Anaphase-promoting complex subunit 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U440_9STRA)

HSP 1 Score: 216 bits (551), Expect = 6.250e-54
Identity = 234/788 (29.70%), Postives = 329/788 (41.75%), Query Frame = 1
Query:  850 QLQWRLQRKVLRLED--GLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RNRASPTRVWECLAAVASGDLRGLL---------------ESEAASAGAGLLDXXXXXXXGGGGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQ-----------VHGDLA--TASNVELASACVMNAV--LRGKSFPGLPESLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----------------------GIKGEREGENGECA---------CVFEVALSVALRQHEEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLR-------GCCPLNRGAEAFVEAHLQRVRLLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAEVSLEDDPRPPAARTSGSSENGGAVDETGDDGRGGAGAEIGAGGMALRGGALKQAVLHLNRAIAMLKRCHDFAGLRECFYLRARVCEKI 2973
            Q Q  LQR++L LE   G  S   +E++E E++A L    ++P+  FLR +N   HRE+ G+LD+LHRYFDYA+RRGGP+ +               S R+  Q+AAL LA LH   GH +LA  A+GE +R AQQ+ D AC+A A+GWL Q+L   G P+A ++L RC ++A D +L  L +S  L LA                                                             + P  VW  L      +  GL                +   A+  A L             R A  L      E    L+ +R  V A A+E+ G+ +M +  AR +L              GDL   T S  E+  A V  A+  L+G+   GL E+                                   G                       G +G R G N  CA          ++E+AL+   R  +EF      +    + +L HE  V  G++R A   G+ LR       G   + +G EAFVE  LQ    L   GR S  VE++  L  L     L   + R L++L RA L   P  P  ALP  LR L + E   +D++HASA   LA++HLR+G   +AR LL+A L  LL ++PVQ QGEAW+ +A C      L+D P P  A TS S+ +     +T            G GG  LRG  L    + L RA +  +R      L+E +YL+AR+ + +
Sbjct:  204 QAQKYLQRRILDLEQEGGRDS---YEDVEEEIEALLQQHPELPRGQFLRYLNSSRHREVAGALDALHRYFDYAIRRGGPNATGKTS-----------SSRNIVQYAALNLAALHLRLGHTDLAFAAIGETVRAAQQNSDHACMAFALGWLSQLLTLTGDPQAEEILFRCLTRAGDQKLRYLESSTALSLAAAEARGGSRLHAGEPLAGLSPPPRPVPSATCVESAYRRTGPSGGTTTGFWGGGRLAVGLEGSRPRAVWNLLRRSVVAETAGLAPPLGIAAPPQTTGPPQPVIATLAASLTSALAS-------RDAFPLTW----EEGLQLANRRCAVTAAAWEQLGHREMTLLQARKLLYCASNGYGAEAGAEGDLGGGTGSKQEVCLARVKLALGALKGRGGDGL-EAAEGGSVEGDFGSEEEVGGAGLGTRGAREPASSLGQGAEKSEGRGGFRPRPLTQMAFAHPGRRGTRPGGN-ICAHKRRGERQLSLYEIALTQLARAQDEFAGSSGAMLPIAMTLLEHEAAVQSGKWRRAYEAGLRLRSLSALPNGPAAVVQGKEAFVEGQLQWTFALLESGRVSACVEASQRLADLCGQLSLPLHHIRCLIQLGRAHLRGCPVDPSSALPSVLRSLTLSERLDVDSLHASATLLLAQIHLRLGFPIKARALLRAALPILLEHSPVQEQGEAWITLAHC-----GLQDLP-PFEAMTSPSATSLHTPKDT----------VKGPGG--LRGAYLDLLDI-LERAASAFERSQGLRSLQEVYYLQARLHDAL 945          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)

HSP 1 Score: 191 bits (484), Expect = 1.870e-45
Identity = 199/655 (30.38%), Postives = 278/655 (42.44%), Query Frame = 1
Query:  838 VSAWQLQWRLQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGP-SMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQ--------GHPRAG---------DVLRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRASPTR------VWECLAAVASGDLRGLLESEAASAGAGLLDXXXXXXXGGGGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQVHGDLATASNVELASACVMNAVLRGKSFPGLPESLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIKGEREGENGECACVFEVALSVALRQHEEFPHPVSNVWAAGVMV-----LLHEWMVNRGEFRAAEGLGMSLRGCCPLNR--GAEAFVEAHLQRVRLLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAE 2709
            ++A QL+  L+R++L +   + +    EE E E+        ++P+A FLR ++C+HHREL G+LD+LHRYFDYA  RGGP S +DA+            S R   Q+AAL LA +H  FGH  LA++A+ EA+RVAQQ  D ACV  A+ WL  V   +        G P  G         D LRR A +A +L L  L  +A  L                                                     R  P          + LA  A    RGLL  EA  AG G               P           V A  + +R  V  G +  FG+  M+   +R++L              A A    A  R     G   + P                                      ER+ + G       VA +VALR+ E      SN  ++ + +     L  EW ++RG  + AE L  +L G  P+    G EA VEA     RLL  + RW  AV++ +EL +    +GL  Q A  L+  +  RL A P SPV AL  ALRCLA+CE ++LD +HA A   L  V++ +GS  +AR L++  L +LL ++ VQ QG+AW A+A+ E+ E
Sbjct:  241 LTARQLELYLERRILSVSADVGTST-LEETERELAFLEALEPELPRASFLRYLSCVHHRELLGALDALHRYFDYARARGGPRSPNDAK------------SARGVAQYAALNLAAVHVRFGHHGLAAIAIDEAVRVAQQRHDHACVTFALSWLKHVDEQEREADADRHGPPLPGEDDGGGANVDALRRAAGRAKELGLGDL-EAASTLAFTVDCVRHGMPSDELQLSPSTPAYQPSDLHVSALAAWELLGRATKALEVPGERDGPAAHHLAMTPQQRLARDAEQRRRGLL-GEAEGAGLGKDAAITERRTVATDAPRT---------VVAQAAAKRHAVAGGVWTHFGFRRMSNLASRALLAT------------ACATARRAAERQARRAGSRGARPADGDACGGLVPHAIRESAAADLAFAALYGDFRPR----ERDRDGGGA----RVAYAVALRRLERLGAHASNRVSSNIAIRAEYLLKFEWALHRGANKRAEALASALLGVSPVQADLGPEAHVEAVRASARLLARRERWERAVKTMNELERYCGRKGLWAQQAECLMLGAHWRLDACPQSPVPALSPALRCLALCEKFALDHLHAEAAFALGRVNVYLGSVAKARSLIQGALPKLLGHSHVQLQGDAWYALAETELRE 851          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A7S4E887_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E887_9STRA)

HSP 1 Score: 146 bits (369), Expect = 6.130e-32
Identity = 183/670 (27.31%), Postives = 264/670 (39.40%), Query Frame = 1
Query:  865 LQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQV--------LAAQGHPRAGDV--------LRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRASPTRVWECLAAVASGDLRGLLESEAASAGAGLLDXXXXXXXGGGGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQVH-------------------GDLAT---------ASNVELASACVMNAVLRGKSFPGLPESL--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIKGER--EGENGECACVFEVALSVALRQHEEFPHP---VSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRGCCPLNRGAEAFVEAHLQRVR----LLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAE 2709
            L+R++L       S +  EE E E         D+P++ +LR +  ++ RE  G+LD LHRYFDYA  RGGP   + E      KGA G       Q+AAL LA LH  FGH  LAS AL EA+RVAQQ  D ACV  A+GWL  V            G P  G+         L+RCA +A  L L +L ++A+L  A                                                 R+    + + +          +  LE E      G  D             +      T G +     C+R +V+A       +        +++LQ                     GDL            + V++A  C+      G     L E L  P                                   I+  +  E EN        VA  +AL++ EE   P    SN+      +L  EW V+R   R A  L  +L G  P  R ++  VE H++ +R    L  A+  +  AV+ A++L ++   RGL    A+LL + S+  L   P  PV A+  ALR LA+CE ++LDA+HA A   LA V L +G+  +AR   + C  ++L  + V  QG+ W A+A+CE+ E
Sbjct:  200 LERRILAAASVCGS-VTLEETELECSKIEALEPDLPRSSYLRFVASLYGREYLGALDHLHRYFDYAGSRGGPVSPNDE------KGARG-----VVQYAALNLACLHARFGHARLASCALDEAVRVAQQRHDHACVTFALGWLRYVDIREAEYEAETYGPPLPGESTHTVDALSLQRCAKRAKQLGLRELESAALLCFARDALDYARTDECYEQEVLTRAYTPSKASRATLAAWKLAEDAAMFEAPGPRDGPDTSMLMQTP--------QQRLERERKERREGQQDPQGLPKDCEIKDRSTVATNPTEGSIFR-ARCRRFMVQAAINGHNQFKRAQALEGKALLQAEERYLQGQRRRRGLDENDSSGDLPEDRAPCVPRELACVDIAFECLFGDFDAGDMTHELGEGLKPPSDVPPSEHLPADPDGSLRAASEAATAKALGLDLEDIEVPKREEHENHIGPPGLNVAYDIALKKLEENRCPNKGASNIVERAQYLLRFEWAVHRHALRRAAALHEALLGVSP--RQSDYDVECHVEALRCDLRLSVARDDYERAVKGAAKLERICGNRGLWALQAKLLCDRSKWLLDGCPQEPVPAMNPALRALALCEQWALDALHAEATLRLALVQLGLGNIPKARDAFQQCQLKILEQSHVDVQGDLWYALAQCELEE 846          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A2R5GT38_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT38_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.090e-29
Identity = 236/995 (23.72%), Postives = 355/995 (35.68%), Query Frame = 1
Query:  181 VRSPDDLVDLAANLTLLLTRPEGKDDTLAAHGRDRPMYLRPDSVFGVFVRRLRAALDGSSFSRLSAIYEEVVRYSDSLRGDASMTYALLCSWSFRRGEQPHHRDHRYRYRNGLAPLHPSFPWLRQSSTSAAPHASIRHRPPPRGADDAQAAGARACRSALGFRFGKCHIVETTAPRNKNKRVDFLSNSVREGSEEKMDHGIVDGGGPGGREEERLFPREVSAWQLQWRLQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKG----------------APGGSGRHTP--QHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAILLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRASPTRVWECLAAVASGDLRGLLESEAASAGAGLLDXXXXXXXGG---GGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQVHGDLATASNVELASACVMNAVLRGKSFPGLPESLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIKG---EREGENGECACVFEVALSVALRQHEEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRGCCPLNR----------GAEAFVEAHLQRVRLLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRARLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSRRARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAEVSLEDDPRPPAARTSGSSENGGAVDETGDDGRGGAGAEIGAGGMALRGGALKQAVLHLNRAIAMLKRCHDFAGLRECFYLRARVCEKIVS-EGGESLDQAKATAERDASARDFLAVSK 3060
            + SPD L D+  +L  +L  P     T   +   RP ++ P  VFG+F+RR+  + +  SF  LS ++ E+  Y+   R  +S    L        G  P  + +  + +                +  A+  A            D    G  A  +              TAP  +                          GGP    +   F   VS  QLQ+ L      +E  +   +P +++E EV   L    D+P+AHF+R +NC+ HRE QG++DSLH YFDY +R GGP+ S                           A    GR  P  Q+A L LA LH++FGH   A LA+ E +RVAQQ+GD  CV  A+ WL+++ ++ G      +LRRC S+A +L L  +   + L+ A                                                     +   VW  L        RG  E  +AS+    L+       GG   GG   +  + G  G  AAG S            R   S    A   S+       + A  +   +  V +A         L   L                                  GG++    E           F  AL + ++  + F +  +N     ++ LL +    RG+   A     +L    P  +          G +    A +  +  LR QGR +EA      L+       L      + L+L++  L  + AS V ALP+ LRCLA  E     ++  SA   LA   L+MG  +RA  LL+  L  +  +   +  G+  L +AKC +AE       + PAAR                                 R   L +++  L  A    +R    + L+E FYL ARV + + S  G    D  +  AERD  A  FLA+ +
Sbjct:  126 IDSPDALFDMLESLREVLLPPSAVSTTSDVNLSGRPTHIEPGGVFGIFLRRVLLSCN-RSFEALSRLFHEIGLYT---RASSSGEGVL--------GLTPRAKPYSLKRKMTFDEAEEDIDLTNMGNDGASAPAG----------QDLNTPGVSAASTGAPSE-------RKTAPSGR--------------------------GGP----DASTFRSFVSRRQLQYHLHMMAEEIESRVGV-VPPQQVESEVAEMLRVTPDLPRAHFVRYLNCLLHREYQGAVDSLHTYFDYCMRSGGPTSSXXXXXXXXXXXXXXXXXXXXXXXXXVHASAALGRRRPMMQYAVLNLAALHYQFGHRHEAMLAIQETVRVAQQNGDHVCVVFALTWLYRLASSAGGQETAQLLRRCLSRARELGLDHVQGLSHLVTAQYRLQAPLAIPTAMPAPVQGFHAIRGL-----------------------GAVAARPVWHALQ-------RG--EDASASSIGTYLEATTTAMRGGAGPGGPRGMRFQQGNAGANAAGSSELMHTNVPDPASRAAMSQAIKAVNASLATPSVHFSNAMTIAGRAQLVKSAAWEAYGHFSL-SWLASLSHLNYYAGRHGTDASDTCLALCRLAILQAEYGGLENLCPEPPTRVNTGPDAFVKALLLLVQAKQTFKYAPNNFIVLTMVYLLLKRATARGDAVDARMYAAALFSLTPSRQSVSGIGGNYFGEDMPARAQILWIDTLRTQGRLTEAHALIHLLMSQGSDMSLHALREAMDLDLAQIFLQ-DGASAVAALPYTLRCLARTERNGQTSLFHSAAIKLAATQLQMGHVQRALQLLQRALPHVTVHGKFEMVGDLHLLLAKCHLAEAR-----KLPAAR---------------------------------RRPLLARSLRALLEATKAHERACYTSELQEDFYLLARVHDALGSLPGCAGADAQRHHAERDRIAARFLALRR 988          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A7S2D4P3_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4P3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.500e-27
Identity = 74/168 (44.05%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  883 RLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQL 1386
            RLE  +  ++ F+E++G +Q  +     +PKA++LR +NC HHR+  G++D+LHRYF+YA R GGP  S A   L  A G  G S     Q+  L LA LH++ G  E A+LAL E +R+A Q  D   +A A+ WLH+V+A   HP+A  VL RCA++ A L LH L
Sbjct:    1 RLERNIG-RISFDEMDGRIQELINLDPTLPKAYWLRCLNCAHHRDHHGAVDALHRYFNYAARWGGPEGSAA---LAEAIGERGNSPM-VAQYGVLNLAVLHWQSGFFESAALALDETVRIAHQHKDHLAIALALSWLHRVMATVHHPQAMGVLERCANRCAALGLHNL 163          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A7S3ZW71_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW71_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.350e-20
Identity = 80/199 (40.20%), Postives = 103/199 (51.76%), Query Frame = 1
Query:  865 LQRKVLRLEDGLSSQLPFEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQV--------LAAQGHPRAGDV--------LRRCASQAADLQLHQLMNSAILLLA 1413
            L+R++L       S +  EE E E         D+P++ +LR +  ++ RE  G+LD LHRYFDYA  RGGP   + E      KGA G       Q+AAL LA LH  FGH  LAS AL EA+RVAQQ  D ACV  A+GWL  V            G P  G+         L+RCA +A  L L +L ++A+L  A
Sbjct:  200 LERRILAAASVCGS-VTLEETELECSKIEALEPDLPRSSYLRFVASLYGREYLGALDHLHRYFDYAGSRGGPVSPNDE------KGARG-----VVQYAALNLACLHARFGHARLASCALDEAVRVAQQRHDHACVTFALGWLRYVDIREAEYEAETYGPPLPGESTHTVDALSLQRCAKRAKQLGLRELESAALLCFA 386          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A448ZHL4_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHL4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.600e-20
Identity = 67/166 (40.36%), Postives = 95/166 (57.23%), Query Frame = 1
Query:  916 FEEIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEGFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAILLLA 1413
            FE +E  ++  L    ++P AHFLR  NC+ H E  G+L++LH YFD+++ +   + + A G          G  R   Q +A+ LA  H  FG+  LA LA  EA+RVAQQS D ACVA A+GWL++    QG     ++LRRC+ +A+  QL  L+  A L LA
Sbjct:  304 FERMEVXIRKMLAIDPELPVAHFLRYXNCLRHGERVGALEALHEYFDHSMVQHTQNRNSASG---------DGFSRDILQFSAILLAMTHSSFGNSNLALLATEEAVRVAQQSKDAACVAFALGWLYEHRG-QGIAERTELLRRCSRRASGTQLRPLVAGAQLTLA 459          
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Match: A0A1E7FF07_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FF07_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.410e-16
Identity = 68/180 (37.78%), Postives = 94/180 (52.22%), Query Frame = 1
Query:  922 EIEGEVQAALGARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAE--------------GFLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQSGDKACVAQAMGWLHQVLAAQGHPRAG--DVLRRCASQAADLQLHQLMNSAILLLA 1413
            ++E  ++  L    ++P AHFLR +NC+ H E  G+LD+LH YFD+++ +   S S A                             +   Q +A+ LA  H  FG   LA LA  EA+RVAQQS D ACVA A+GWL++     GH  A   ++LRRCAS+A+  QL  L+  A L LA
Sbjct:  199 QMEVYIRNMLKNNPELPAAHFLRYLNCLRHGERVGALDALHEYFDHSMVQHTNSRSAASIDNSSXXXXXXXXXXXXXXXXXXXXXXSKDILQFSAILLAMTHSSFGDSNLALLATEEAVRVAQQSKDAACVAFALGWLYEH---HGHGTAERRELLRRCASRASQGQLRPLVAGAQLTLA 375          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1767.4990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKY0_9PHAE0.000e+059.96Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
D7FTQ0_ECTSI5.790e-26150.10Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
W7U440_9STRA6.250e-5429.70Anaphase-promoting complex subunit 5 n=2 Tax=Monod... [more]
F0Y6Q2_AURAN1.870e-4530.38Anaphase-promoting complex subunit 5 n=1 Tax=Aureo... [more]
A0A7S4E887_9STRA6.130e-3227.31Anaphase-promoting complex subunit 5 n=1 Tax=Pelag... [more]
A0A2R5GT38_9STRA5.090e-2923.72Anaphase-promoting complex subunit 5 n=1 Tax=Honda... [more]
A0A7S2D4P3_9STRA7.500e-2744.05Anaphase-promoting complex subunit 5 (Fragment) n=... [more]
A0A7S3ZW71_9STRA1.350e-2040.20Anaphase-promoting complex subunit 5 n=1 Tax=Pelag... [more]
A0A448ZHL4_9STRA8.600e-2040.36Anaphase-promoting complex subunit 5 n=1 Tax=Pseud... [more]
A0A1E7FF07_9STRA2.410e-1637.78Anaphase-promoting complex subunit 5 (Fragment) n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1767contigL-elsbetiae_contig1767:2179..11739 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score787.3
Seed ortholog evalue8.5e-225
Seed eggNOG ortholog2880.D7FTQ0
Preferred nameAPC5
KEGG koko:K03352
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04657,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04657,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000152,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016567,GO:0019538,GO:0019941,GO:0030071,GO:0030163,GO:0031145,GO:0031331,GO:0031461,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070647,GO:0071704,GO:0090068,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905818,GO:1905820,GO:1990234,GO:2001252
EggNOG free text desc.protein K11-linked ubiquitination
EggNOG OGsKOG4322@1,KOG4322@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko04121
Exons14
Model size3712
Cds size3114
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1767.4990.1prot_L-elsbetiae_contig1767.4990.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1767 2230..11192 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815736.0998068-UTR-L-elsbetiae_contig1767:2178..22291622815736.0998068-UTR-L-elsbetiae_contig1767:2178..2229Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1767 2179..2229 +
1691683069.367407-UTR-L-elsbetiae_contig1767:2178..22291691683069.367407-UTR-L-elsbetiae_contig1767:2178..2229Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1767 2179..2229 +
1622815736.2985492-UTR-L-elsbetiae_contig1767:11192..117391622815736.2985492-UTR-L-elsbetiae_contig1767:11192..11739Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1767 11193..11739 +
1691683069.5084019-UTR-L-elsbetiae_contig1767:11192..117391691683069.5084019-UTR-L-elsbetiae_contig1767:11192..11739Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1767 11193..11739 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815736.111405-CDS-L-elsbetiae_contig1767:2229..24621622815736.111405-CDS-L-elsbetiae_contig1767:2229..2462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 2230..2462 +
1691683069.3802793-CDS-L-elsbetiae_contig1767:2229..24621691683069.3802793-CDS-L-elsbetiae_contig1767:2229..2462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 2230..2462 +
1622815736.123629-CDS-L-elsbetiae_contig1767:3098..32641622815736.123629-CDS-L-elsbetiae_contig1767:3098..3264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3099..3264 +
1691683069.3882563-CDS-L-elsbetiae_contig1767:3098..32641691683069.3882563-CDS-L-elsbetiae_contig1767:3098..3264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3099..3264 +
1622815736.1389172-CDS-L-elsbetiae_contig1767:3437..35921622815736.1389172-CDS-L-elsbetiae_contig1767:3437..3592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3438..3592 +
1691683069.4004536-CDS-L-elsbetiae_contig1767:3437..35921691683069.4004536-CDS-L-elsbetiae_contig1767:3437..3592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3438..3592 +
1622815736.1521435-CDS-L-elsbetiae_contig1767:3955..40991622815736.1521435-CDS-L-elsbetiae_contig1767:3955..4099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3956..4099 +
1691683069.4108117-CDS-L-elsbetiae_contig1767:3955..40991691683069.4108117-CDS-L-elsbetiae_contig1767:3955..4099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 3956..4099 +
1622815736.167529-CDS-L-elsbetiae_contig1767:4206..43991622815736.167529-CDS-L-elsbetiae_contig1767:4206..4399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 4207..4399 +
1691683069.4188578-CDS-L-elsbetiae_contig1767:4206..43991691683069.4188578-CDS-L-elsbetiae_contig1767:4206..4399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 4207..4399 +
1622815736.1835656-CDS-L-elsbetiae_contig1767:4932..50621622815736.1835656-CDS-L-elsbetiae_contig1767:4932..5062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 4933..5062 +
1691683069.426865-CDS-L-elsbetiae_contig1767:4932..50621691683069.426865-CDS-L-elsbetiae_contig1767:4932..5062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 4933..5062 +
1622815736.1938796-CDS-L-elsbetiae_contig1767:5931..60491622815736.1938796-CDS-L-elsbetiae_contig1767:5931..6049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 5932..6049 +
1691683069.434863-CDS-L-elsbetiae_contig1767:5931..60491691683069.434863-CDS-L-elsbetiae_contig1767:5931..6049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 5932..6049 +
1622815736.206417-CDS-L-elsbetiae_contig1767:6652..68081622815736.206417-CDS-L-elsbetiae_contig1767:6652..6808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 6653..6808 +
1691683069.4428694-CDS-L-elsbetiae_contig1767:6652..68081691683069.4428694-CDS-L-elsbetiae_contig1767:6652..6808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 6653..6808 +
1622815736.2215703-CDS-L-elsbetiae_contig1767:7245..77501622815736.2215703-CDS-L-elsbetiae_contig1767:7245..7750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 7246..7750 +
1691683069.4523554-CDS-L-elsbetiae_contig1767:7245..77501691683069.4523554-CDS-L-elsbetiae_contig1767:7245..7750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 7246..7750 +
1622815736.2344143-CDS-L-elsbetiae_contig1767:8119..85141622815736.2344143-CDS-L-elsbetiae_contig1767:8119..8514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 8120..8514 +
1691683069.4621983-CDS-L-elsbetiae_contig1767:8119..85141691683069.4621983-CDS-L-elsbetiae_contig1767:8119..8514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 8120..8514 +
1622815736.2452567-CDS-L-elsbetiae_contig1767:9122..92241622815736.2452567-CDS-L-elsbetiae_contig1767:9122..9224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 9123..9224 +
1691683069.470724-CDS-L-elsbetiae_contig1767:9122..92241691683069.470724-CDS-L-elsbetiae_contig1767:9122..9224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 9123..9224 +
1622815736.2563658-CDS-L-elsbetiae_contig1767:9792..100181622815736.2563658-CDS-L-elsbetiae_contig1767:9792..10018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 9793..10018 +
1691683069.4807885-CDS-L-elsbetiae_contig1767:9792..100181691683069.4807885-CDS-L-elsbetiae_contig1767:9792..10018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 9793..10018 +
1622815736.2697616-CDS-L-elsbetiae_contig1767:10393..107711622815736.2697616-CDS-L-elsbetiae_contig1767:10393..10771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 10394..10771 +
1691683069.4903255-CDS-L-elsbetiae_contig1767:10393..107711691683069.4903255-CDS-L-elsbetiae_contig1767:10393..10771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 10394..10771 +
1622815736.2830663-CDS-L-elsbetiae_contig1767:10979..111921622815736.2830663-CDS-L-elsbetiae_contig1767:10979..11192Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 10980..11192 +
1691683069.4999745-CDS-L-elsbetiae_contig1767:10979..111921691683069.4999745-CDS-L-elsbetiae_contig1767:10979..11192Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1767 10980..11192 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1767.4990.1

>prot_L-elsbetiae_contig1767.4990.1 ID=prot_L-elsbetiae_contig1767.4990.1|Name=mRNA_L-elsbetiae_contig1767.4990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1038bp
MYPVTPAASVHGADTLQDEITAAFSQSPFGRSVADRVGRRLLLVRSPDDL
VDLAANLTLLLTRPEGKDDTLAAHGRDRPMYLRPDSVFGVFVRRLRAALD
GSSFSRLSAIYEEVVRYSDSLRGDASMTYALLCSWSFRRGEQPHHRDHRY
RYRNGLAPLHPSFPWLRQSSTSAAPHASIRHRPPPRGADDAQAAGARACR
SALGFRFGKCHIVETTAPRNKNKRVDFLSNSVREGSEEKMDHGIVDGGGP
GGREEERLFPREVSAWQLQWRLQRKVLRLEDGLSSQLPFEEIEGEVQAAL
GARSDVPKAHFLRLMNCMHHRELQGSLDSLHRYFDYAVRRGGPSMSDAEG
FLDLAKGAPGGSGRHTPQHAALALARLHFEFGHLELASLALGEAIRVAQQ
SGDKACVAQAMGWLHQVLAAQGHPRAGDVLRRCASQAADLQLHQLMNSAI
LLLAKEAAAAKHGNPTHGSSGSSSSNNNNGGDGSNGSSSSASVAASSMGG
GGRRNRASPTRVWECLAAVASGDLRGLLESEAASAGAGLLDSMAASGAGG
GGRPAVELRGGTGGEVAAGLSCQRLLVEAGAFERFGYSDMAVACARSVLQ
VHGDLATASNVELASACVMNAVLRGKSFPGLPESLPPPPPPPPPPPPHQS
RGSGDGAAEDAAAAEEEKKGGIKGEREGENGECACVFEVALSVALRQHEE
FPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRGCCPLNRGAEAF
VEAHLQRVRLLRAQGRWSEAVESASELVKLSDTRGLAPQYARLLLELSRA
RLGAEPASPVGALPHALRCLAVCESYSLDAIHASAMTHLAEVHLRMGSSR
RARILLKACLGQLLANAPVQSQGEAWLAMAKCEMAEVSLEDDPRPPAART
SGSSENGGAVDETGDDGRGGAGAEIGAGGMALRGGALKQAVLHLNRAIAM
LKRCHDFAGLRECFYLRARVCEKIVSEGGESLDQAKATAERDASARDFLA
VSKAGVWALLSPSPGLKIGPAEVQRYIEASMSAIPWG*
back to top

mRNA from alignment at L-elsbetiae_contig1767:2179..11739+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1767.4990.1 ID=mRNA_L-elsbetiae_contig1767.4990.1|Name=mRNA_L-elsbetiae_contig1767.4990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9561bp|location=Sequence derived from alignment at L-elsbetiae_contig1767:2179..11739+ (Laminarionema elsbetiae ELsaHSoW15)
CCCCCTCCTCCTTGCCTCCTCCTCCTCCTCCTCTCGACTAACCCATGGAG CATGTATCCCGTAACTCCTGCTGCGTCCGTCCATGGTGCAGATACGCTTC AGGACGAGATCACAGCGGCGTTTTCCCAGAGCCCGTTCGGGCGGAGCGTG GCGGACAGGGTCGGCCGGCGGCTGTTGCTCGTGCGGTCCCCCGATGACCT GGTCGATCTCGCGGCCAACCTCACCCTCCTGCTGACGAGGCCGGAAGGAA AGGATGACACGCTGGCCGCGCACGGGCGAGACAGGTCGGATGGGATGAGA TGGGAACGATAGAACAGAGGGGAGATTGGTCTTGGCGCAGACACAGGCAG GAGCGCGCCGGGCTGGCGGTTCGTACTCGGCAGGTTCAACAGGATAGAGC GAGCTTACGACAGAGAGATACAACACATCTCTAAGACAACAGCTTGGTAG GCTGGATCTGGTTTTGGAGAAGAGGGGGGGGGGGGGGGGGGCCCCCCCCC CTCCCCTCCCTCCCCCACCACAAAAAAAAGAACAAAAAACCCCCGACGAA CACTTTCACGAAGAAAGAAGGGGTGGGGGGGGGTGGGGTGGGGGGGGGGG AGGGGGGGGGGGGGGGGGTCTCTCCCTCTCTCTCTCTCTCACGCACACAA AAAAAAAGGTCCAATACCGACGGTAGAAAGCTTTCAGAAAGAGGCCTTTT AAATACCACTTATTTTCCCTGAAATCCTGAAGCATTTTTTTTTTTAAAGG TGGCTGAAAAGAGGAAAGTACCTATCATTCCATGTGTTCTCGTTTCAAGA GCGAGACTCCGGTGTGCAGTCCGCTCCGCCGGCACACACCACACACGACA AGGAGAAAATTGTGCCCGTGTATCATAAAACTGACACCAGAGTTATGCTG CTGCTGCTTGCCGAGAACAGGCCCATGTACCTGCGACCCGACAGCGTCTT CGGGGTGTTCGTGCGACGTCTCAGGGCAGCCTTGGATGGCTCGAGCTTCA GCCGCCTGTCTGCCATCTACGAGGAGGTCGTGCGCTACTCGGACAGCCTG AGAGGTGACGCGTCGATGACTTACGCCTTGCTTTGTGTGGCTTTCGCCGA CAGCTAGCCTGGTCTACTGCTGTAAATACTCCCATCGTTTTTTTTCTTGG CGGCACCGGCTGTTGCCGCGGCTGCCGCCGGACCCCCCCCCAGGTGCCCT CCACGGGAGAATCAACTGGTCAACCAACCCACCTGCTGAACAACCCGCCC CTGGTTTAGTCTTGGTCTTTTCGCCGAGGAGAGCAACCGCATCATCGTGA CCATCGTTACCGTTACCGAAACGGACTGGCTCCCCTTCATCCCTCGTTTC CTTGGCTCAGACAATCTTCAACAAGCGCTGCCCCCCATGCCTCTATACGG CACCGCCCGCCGCCGTGTCACGTTGTCACCACCCCCCCAATACAACGAAT AATACGCGGCACGGCCAACTCTAGAAGTCGAATCATCCTCCGGTGTCAGC CTCGACGCAAGCTTGGGGGATGACGTCATGATGGACCTGGGGTCGCCGCC CACCGGAGGGGCGGGGATAGGCGGAGGAGGAGGGGCAGGAGGAGGAGGCG GGCATATTGATGCCTTTCTGCGGCAGCAAGGTCAGGGGGGGAATGAGATA CTCCCAAGTTTGTCACGTTTTTGTATCGTTTGCGGAATGTGCAGCACACC GACGGCGTTTGTAGGAAGAATATGCGCCCAATGTGAACCATAAAGCGCGA ACGGTTTGGGGGCGTGTGGAGCATAAGGCGGGGTGCGGATGATGCCCAGG CCGCCGGGGCGAGAGCTTGCCGAAGTGCACTGGGGTTCAGGTTTGGCAAA TGTCACATCGTCGAAACCACAGCACCCCGCAACAAAAACAAACGTGTGGA TTTTTTGTCAAACAGCGTGCGGTAGGCGGCAGGCACACCATGCCACACCT CGTGGGCAGAATTTCGTGTTTGACCGTCGTCGTCATTTCCTGCATTCGTT TGTTTTCAGGATCGGCGGCTGGCGGAAGAGAGGGCTCCGAGGAGAAGATG GATCACGGGATTGTCGATGGCGGGGGGCCGGGGGGGCGGGAGGAGGAGCG CCTGTTCCCCCGGGAGGTGTCGGCGTGGCAGCTGCAGTGGCGCCTGCAGA GGAAAGTTCTGCGGCTGGAGGACGGCCTTAGCAGCCAGCTCCCGTTCGAG GAGATTGAGGGCGAGGTGCAGGTAAGACGAGAATACTGGCGTGAGTGACC GTGGGGCCTACCTGCACCGAAAAAAACTTAGGAATCAACCGGACGCGGCT GGTGGGTCCAAAAACCCGGGATCGTTCTTCTATTAAGGTCGGACCAAAAC GGGCGGCGGGTCAGCCCGAAAAATCCGGGATAATTATTTAAAAGGTCGGG CCAAAAAAAGGGCGAAGCCCACCGAATGGACCAGAACAGCGCTGAACCGG GCCTTGTGTAAACCAAATTTGAAAACCGGACTTCACGAACCAAGCCAGCC GGATGAACCAAACGACACATAACGCGATGGACATCACCTACATACATACC AGATTCAGAACGATTTTCCGACGTCCTTTGACTGCATGAATTACGCCGGA TGAGTGCGAGGTTGTGCGGGGTGGGGGGGGGGGGGGGGGGGGGGCAACGA CCCACCCACCGCCTCGCTCATCTTGATTGGCTCTTTTCTTTGGCCCTCTC GCCCATGCACCCACGCGCTTCGGCCGTTTCTCCCTTAACCTTGCCGCGTT TTAGGCCGCCCTCGGGGCGCGTTCCGACGTGCCGAAGGCGCACTTCCTGA GGCTCATGAACTGCATGCACCACCGCGAGCTGCAGGGCTCGCTCGACAGC CTCCACCGGTACTTCGACTACGCGGTCCGAAGGGGTGAGAGGAACAGGGA CAGGCAGACAGTCAGACAAGCAGGGAGGCAAAGAGACGGAGAGAGAAAAA GCGAGCAAGTTTGGTTGGTTGATTGGCGTATGCGACACCCCGCGCCGGCG AGGAGCGTCTGGTATTTAGGGGCACAGTGACAGCGACGTGCAAGATGCGA CAGCTGAGTGGAGGCTCGCGCTGATCGGGCGCTCGAGTGCTTGGCCAGCA GCAGCAGCAGTCTCGGCAACGAGCTGCGGTGTTGCCGATTCTTGCATCAC CACCACACCGCCGACCTGAAAACGAAGCATCACCACCACACCGTGATGTT AGAATGAGAATGAAAATAAGAATGAATATCTCGGTCGCCGGCGAGGGTTA GGTCCGACTGACATCGAAGGATCGAGAGAGCAAAAATGAAAAATTGCATG CAATCCGCTACATATAATGATGGACAAGAGGAGAAACAGTTCGGGGGCGG AAAAATCCTTCTTCCCTTTCCGGAGAGCTGCAGGCATCGACATGGACATC AACATCGACATCGGGTGTGAAGCGAGACCCGACTTAAAGAGGCCCAGGAA GTTGCACCAACGAGTCGCAGCCCGGAGCCGTGCGATACGATACCCACCTA CACCGCCGGTTCGGGGTTCCTTGAGAGCGCTTGGCCACGTTCCTGTATTC ATTATCCCCGTTGGGCGGCGCTTTGTACAAGGGCCGCCCATTTTGTTTTT GTTTAGTTCACGGAGGGCTGGACAGGGTTTTAGCGGGTGTATGGTGACTC ACTTCATTGTGTGTGTGCGCTGTTTAATTAATTTTTTCGGCATTTGCGGG ACTAAACCGTGCGTTTGTGTGCATGCATCTCTGTTTTATGTATTTGCTTT CAGGCGGGCCGAGCATGTCAGACGCAGAAGGCTTCCTCGACCTGGCCAAG GGGGCGCCGGGAGGGAGCGGTCGGCACACCCCGCAGCACGCGGCGCTAGC TCTGGCAAGGCTCCATTTCGAGTGAGTTGGTCTTGGCCTTGGGCGTGTGC GGGTCGTCGTGCTGGCTGTGGTTAGGGATCGTTGAGGCGTTTTAGCGCAT GCTGCGTGGGGATAAATGCGGAAGGCGGTCTTTCGATTCGAGACCTGCTG TGTACCCTGCTGCCGTCGAGAAATCTGCTTGATGCCAGCACTTTTTACCA CGACAATGCCTCTTTTCTTCTGCCGGGCGCCGGCCCATGTCGCCGCCGTC ACTGTTGATTTTGATTTTTTTCCCCCATCTTGTAGGGGCGACTGCGCCAA ATCAGGCGCCATTGCTACCCTGCGCGGAGCATCAAGAGCGTCTGTTAGAC GCTGTCACCAACATCCGACATCCGCACGAGTGTCCCAGAACAGACGCCGC TTGGTATCCTTTGTGTTTCAACGTCGCTGGTTGTGGGTGGCGGCGTAGGG CTACGCTAAATCGATGTGACGCGGGTTGTATACGTAGCAGGACGGTCAGC AGAGCAGCTGGACAAATTGGTGGACATGCGCACCGCAGTTTTCGTTTTTT GTCGCCGCCACCGTGTCCGTGTCGCACCGCCATTTGTCACTTATCGTGTC ATTCGCCGATCGTGATCTTGTCAGATTCGGACACCTTGAGCTCGCGTCGC TGGCGCTCGGGGAGGCGATCAGAGTGGCGCAGCAGAGCGGCGACAAGGCT TGCGTTGCGCAGGCGATGGGGTGGCTGCACCAGGTGCTGGCCGCACAGGG GCATCCGAGGGCTGGCGATGTGCTGAGAAGGTAGGAAAGGATGGAGCGAC AACACGGCAGTATCCTGCCTGCCAGCGAGGGTTGTTTTACGTTTGAGCAC ACCTCCTCTTCCTCATTTTTCGTTTTTTGGTGTTCTTCGTCCATGGCGTA CAGGCCGGGTTCTCGCAGGCCGGGTTGTCGCAGGGAGCAGGGGGCGGACG TTAGGCACGTGCGTCGGGCGTTTTGGCAGCAAGTGCCGGGCTGGCCAATG ATCCGTTTGGCACATTTGTTGTGTACATACATACAAGCTGGCACGGATTG TGCGCGTGGTTATTTTCGGTCGCCGACGCGTTTTGGTGGGTGGTAGCTGC AGAGGATGCTGGCCCTGATACAGCTTCTTTTGGGTTGGTTATTTGGTTCT TCGCCGCTAGTCTCGCTCGTACCCGCTCCAACGCTGCCGATGCCGCCGCC GCCGCCGCAACCTTCAGGTGTGCTTCCCAGGCGGCCGATCTTCAGCTGCA CCAGCTGATGAACTCGGCAATCCTGCTCCTCGCAAAGGAGGCAGCGGCGG CGAAGCACGGGAATCCCACCCACGGCAGCAGCGGCAGCAGCAGCAGCAAC AACAACAACGGTGGCGATGGCAGCAACGGCAGCAGCAGCAGCGCCTCCGT GGCGGCATCGTCGATGGGGGGAGGGGGGCGGCGAAATCGAGCGTCCCCGA CCCGGGTGTGGGAGTGTCTCGCTGCGGTCGCTTCCGGCGACTTACGGGGC CTCCTCGAGAGCGAGGCGGCGAGCGCAGGCGCCGGGCTGCTGGACAGCAT GGCAGCGTCTGGGGCCGGGGGCGGCGGCCGGCCGGCGGTGGAGCTGAGAG GGGGCACGGGGGGCGAGGTCGCGGCGGGACTGTCCTGCCAGCGGCTGTTG GTGGAGGCCGGGGCCTTCGAGAGGTTCGGGTACTCGGACATGGCGGTGGC TTGCGCCCGCTCGGTCTTGCAGGCGAGCTGTTGGTATCGGCCATGGTTAT AAATAGTTTTTACGGGGTACATAATTAGCGGTGTTTCTGTCGAGATCCAA TGCACGGCCGAGCGGCAGCACTTGTGTTTTCGTTTTTCGGGCCGTTCGTG CCGGGCGCATGCTTCGTTGGTGTGGTTCGGCCTCGCGTAGTGAATTTTTT GTGTCCACTCGAGTCTTCTAAGGTCTACCATCTGCAAACTCGTCCGCGAG TATAGCATAATCGTTATTGTAGGAGCTTTCACGTACTCTCTCAAGTCTAT ACTTGGAAGCCTTTTTAAGATTTCGACCCTCAACGGCCCCGTCTTTCGCC GCCCTCCACGAACGCCCCACGGCCGGCCACACTGCCGATAGGTACACGGC GACCTCGCCACAGCATCGAACGTCGAGCTAGCCTCCGCCTGCGTCATGAA CGCCGTTCTTCGAGGGAAGAGCTTCCCCGGCCTTCCGGAGTCCCTCCCTC CTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCACCAGTCTCGGGGCAGC GGGGATGGTGCGGCGGAGGACGCAGCAGCAGCGGAGGAGGAGAAGAAAGG GGGGATTAAGGGCGAGAGGGAGGGGGAGAACGGGGAGTGTGCGTGTGTGT TCGAGGTGGCGCTGTCGGTGGCGCTGCGGCAGCACGAGGAGTTCCCGCAC CCGGTGTCGAATGTGTGGGCCGCGGGCGTGATGGTGCTGCTCCACGAGTG GATGGTCAACCGAGGGGAGTTTCGTGCCGCTGAAGGGTAAGAAGTAGCAA GACTAGTCTGAGGCAGAGACGACCATGCGACGCTTAAATTGAATTCTAAG TAGATGGTAGCATACGAACTCTTGGTGGTAGTTTTGTATGCGTGGGTGAG AGTGGAGAACAGAGGCCGTACAAGTGGATGTTGTACCACGGGGAATTTAT TCACTGAGAGGTACGGGATCCTGGTATTGTGTGAGAGGGGGAGTCCGCGC GGGGCAGCATCGCAAAAGAAGGATCCGACACGAAGGCAAGGTTTGAGTAC GCAGATCATGCACTCCTGTAAGGCAAACGGTGTTTCCACAGATCGATCGG TCCAGCGCTAACGAGAGAGGCACACGCGAAGGAGTTATTGTGTTTTGGTG GTTGACCACTCGTTTGAGGCGCCCCGTGCGAATGTATGATCGCACCACAT GGTTCGGAAACCCGAGATGTATACACTACCATAGCCTGTGCCCCTTGTCT ATGTCTTCGTTGTTCACACCCGGGAGAGAGAGAACACAAAGCCGTGTTGT CTTCGCAACGATGAACTCGCTCCCATCGGCATCGTTTCTCGTGTTCGTGT GGCCGTCTTTTGTTTCGTCTGCTCCCTTGTTGTTTCCTTGGAAGGCTGGG CATGAGCCTCCGGGGCTGTTGTCCCCTGAACCGAGGAGCAGAGGCGTTTG TCGAGGCGCACCTGCAGAGGGTTCGGCTTCTCAGGGCACAGGGCAGGTAA GTGTGTAGGTGTTTAAAGCATCGCCGAGCGTCTTTTGTTCCTTCGCTGGC GACGCCGGCTGAGAATTCAGGCTTTGTGGTCCATCTCGAAGTTGCCACCC CGGGATGTCCCCGTTCGGTGTCCGTAAACACTCAGGAGTGCTTTTGGCCC GCGAAAAGTCTTGAACGATTTGCCGTTTTTGGCTGCGCGGGACTCTCTTG AACGGGGTATCCATGGCTGCCGCTTTTCTAGCGCGGGTCCATCGCATGCC CTGGGCTACTTGCGCGGGCGAAATCTGTTCGCCAGGCTCACAATAACCCA CCCACGGTATCGCGGTCGCCCTCTCGAGACTCTTGCAATGAAGCGCAAGT TTTTTCGGATCCGAGAAAACGGCGGATTTGCCTTGTGCTAAGATTGCCAC CACAAGACGAAGTGTTCCCACCCGTCTAATAAACAGCAAAACTGTACTAG GTGTACATAGAATTCCAATCCAAGACACGAGACAAAGAACTACCAAGTCC CTCTTCCCTCTTGAGCACCCCTCCCCCCCTCCCTCCCTCGCCGTGTTGTG CCACATTACTTCAGGTGGAGTGAAGCCGTGGAGTCGGCCTCCGAGCTGGT CAAGCTCAGCGACACTCGAGGCCTCGCGCCGCAGTACGCGCGTCTCTTGC TGGAGCTATCTCGAGCGCGGCTGGGGGCGGAGCCGGCGTCTCCGGTGGGA GCGCTGCCGCACGCGCTGCGGTGCCTGGCGGTGTGCGAGAGCTACTCGCT CGACGCGATCCACGCCTCGGCGATGACTCACCTCGCGGAGGTAGGTAGGG TGCGGACGGCACGGTGGGGTTGGCGGCAACGTTGCGATGTTTTGGCTCTA GTGCTGTAGACTATGTAGACACGCTGTTGCAGCAATTTTTGGGTCCTGCG CGTCTCTGTTCAAAGCGAGCCGCGGCCATGATATGTATGTAGGACAGATG CGATCGAGCGGGTTTGTTCGAAACGACTTCTGACTGCCCTATGAACTCAC GGGGTGTGCGTCTCCCTACTCACTCAGTGTAGTTACAGTAGTGGTAGTGC CCTGCTCAGTCGTCTGGGCTTTTGCTCAGTGGTCCTCCACGTGAGCGAGC GGTACACGCCACAACTTGTAACCCGATCCGGGATATATATCTCCGACCTC CGCGCGCCTGGACAGGTGCACCTCCGAATGGGCTCGAGCCGACGGGCGCG CATCCTTCTCAAGGCCTGCCTTGGACAGCTCCTGGCCAACGCCCCCGTGC AGTCCCAGGGAGAAGCCTGGCTGGCGATGGCAAAGTGCGAGATGGCGGAA GTTTCCCTGGAAGATGATCCACGTCCGCCCGCCGCAAGAACGAGCGGTTC TAGTGAGAACGGGGGCGCGGTTGACGAAACCGGGGATGACGGGCGGGGGG GGGCGGGGGCGGAGATAGGGGCAGGGGGGATGGCGCTGCGAGGGGGAGCC CTGAAACAGGCAGTGCTTCATCTGAACCGAGCGATCGCGATGCTGAAGCG TTGCCACGACTTCGCTGGGCTGCGGGAGTGCTTCTATCTGAGGGTGGGTT CGTTTCCTCGCGGGGCGGGGGGACCGTGTCTGTATATTCGTATGCAGGAC GGTACATACATAAGAGTTAGAGTTCCTGAGCCACCACGCATGAGCGCTGT GCTGGCGCGTTTTGGAGTTTTTTTGTTGGCCGCCCACAACCCCCCCCACC GTTGCCCCCCCCGTCTCGCTCTCTCCGCCCGTGGTGCGCGAAACGTTTCA GGCCCGCGTGTGCGAGAAAATCGTGTCCGAGGGCGGCGAAAGCTTGGACC AGGCCAAGGCTACCGCAGAGCGTGACGCCTCGGCCAGAGATTTTTTGGCG GTTTCAAAAGCCGGGGTCTGGGCTCTGCTGTCCCCATCCCCGGGCCTGAA GATCGGGCCCGCGGAAGTTCAGCGGTACATTGAGGCTTCTATGTCTGCGA TCCCGTGGGGGTAACACTTCCGGCGATTGGAAAGGGAAAATAATTGGATC TTGTCGGAGGCGGAACGATATAGTGTCGGGTGGTGTCCGATGTGTCGCTT TGTAAAGCCAGCCAGTCAGGCTCCGCGCTTGAATCGGGTGTGTTACCTTG GATGCAGATGCAGAGAAATGCAGAGAAGTAGACGTGACAGAGTGGGCCGT TGCTTGCAGATCTTGCTGGGTGTGCGGTATCGCAGGTGTGGTGGTGTGGG CGTATGATATGCTGCGAAGCACGCCAAAGGATGGCTGCAGCAGCGAAATG GGTGGAAGGGTCATGGTGTCTCTCGAGGGGAGAGGAAGCTCCAGTGATAC CCGGCAAGCACTGTATTTGCGTCCGGGGTGGGGTGGTTCCTTGGGCGCTT GGGATTTGCGGCCGACTCAATTTAACGATACTGGATTCAAGATTAAACCA AACCCGCTGCATAATGGAAACTGATACGGAGTAGCACAAAGCGACGTCTT CAGGAGTACTTAGCGCAGCCACTAGGGTCTGGACAGTTAAATTTTTCCAC CACGTGTGACC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1767:2179..11739+

>mRNA_L-elsbetiae_contig1767.4990.1 ID=mRNA_L-elsbetiae_contig1767.4990.1|Name=mRNA_L-elsbetiae_contig1767.4990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6228bp|location=Sequence derived from alignment at L-elsbetiae_contig1767:2179..11739+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATCCCGTAACTCCTGCTGCGTCCGTCCATGGTGCAGATACGCTTCA
GGACGAGATCACAGCGGCGTTTTCCCAGAGCCCGTTCGGGCGGAGCGTGG
CGGACAGGGTCGGCCGGCGGCTGTTGCTCGTGCGGTCCCCCGATGACCTG
GTCGATCTCGCGGCCAACCTCACCCTCCTGCTGACGAGGCCGGAAGGAAA
GGATGACACGCTGGCCGCGCACGGGCGAGACAGATGTATCCCGTAACTCC
TGCTGCGTCCGTCCATGGTGCAGATACGCTTCAGGACGAGATCACAGCGG
CGTTTTCCCAGAGCCCGTTCGGGCGGAGCGTGGCGGACAGGGTCGGCCGG
CGGCTGTTGCTCGTGCGGTCCCCCGATGACCTGGTCGATCTCGCGGCCAA
CCTCACCCTCCTGCTGACGAGGCCGGAAGGAAAGGATGACACGCTGGCCG
CGCACGGGCGAGACAGGCCCATGTACCTGCGACCCGACAGCGTCTTCGGG
GTGTTCGTGCGACGTCTCAGGGCAGCCTTGGATGGCTCGAGCTTCAGCCG
CCTGTCTGCCATCTACGAGGAGGTCGTGCGCTACTCGGACAGCCTGAGAG
GTGACGCGTCGATGACTTACGCCTTGCTTTGTGCCCATGTACCTGCGACC
CGACAGCGTCTTCGGGGTGTTCGTGCGACGTCTCAGGGCAGCCTTGGATG
GCTCGAGCTTCAGCCGCCTGTCTGCCATCTACGAGGAGGTCGTGCGCTAC
TCGGACAGCCTGAGAGGTGACGCGTCGATGACTTACGCCTTGCTTTGTTC
TTGGTCTTTTCGCCGAGGAGAGCAACCGCATCATCGTGACCATCGTTACC
GTTACCGAAACGGACTGGCTCCCCTTCATCCCTCGTTTCCTTGGCTCAGA
CAATCTTCAACAAGCGCTGCCCCCCATGCCTCTATACGGCACCGCCCGCC
GCCTCTTGGTCTTTTCGCCGAGGAGAGCAACCGCATCATCGTGACCATCG
TTACCGTTACCGAAACGGACTGGCTCCCCTTCATCCCTCGTTTCCTTGGC
TCAGACAATCTTCAACAAGCGCTGCCCCCCATGCCTCTATACGGCACCGC
CCGCCGCCGCGGGGTGCGGATGATGCCCAGGCCGCCGGGGCGAGAGCTTG
CCGAAGTGCACTGGGGTTCAGGTTTGGCAAATGTCACATCGTCGAAACCA
CAGCACCCCGCAACAAAAACAAACGTGTGGATTTTTTGTCAAACAGCGTG
CGGCGGGGTGCGGATGATGCCCAGGCCGCCGGGGCGAGAGCTTGCCGAAG
TGCACTGGGGTTCAGGTTTGGCAAATGTCACATCGTCGAAACCACAGCAC
CCCGCAACAAAAACAAACGTGTGGATTTTTTGTCAAACAGCGTGCGAGAG
GGCTCCGAGGAGAAGATGGATCACGGGATTGTCGATGGCGGGGGGCCGGG
GGGGCGGGAGGAGGAGCGCCTGTTCCCCCGGGAGGTGTCGGCGTGGCAGC
TGCAGTGGCGCCTGCAGAGGAAAGTTCTGCGGCTGGAGGACGGCCTTAGC
AGCCAGCTCCCGTTCGAGGAGATTGAGGGCGAGGTGCAGAGAGGGCTCCG
AGGAGAAGATGGATCACGGGATTGTCGATGGCGGGGGGCCGGGGGGGCGG
GAGGAGGAGCGCCTGTTCCCCCGGGAGGTGTCGGCGTGGCAGCTGCAGTG
GCGCCTGCAGAGGAAAGTTCTGCGGCTGGAGGACGGCCTTAGCAGCCAGC
TCCCGTTCGAGGAGATTGAGGGCGAGGTGCAGGCCGCCCTCGGGGCGCGT
TCCGACGTGCCGAAGGCGCACTTCCTGAGGCTCATGAACTGCATGCACCA
CCGCGAGCTGCAGGGCTCGCTCGACAGCCTCCACCGGTACTTCGACTACG
CGGTCCGAAGGGGCCGCCCTCGGGGCGCGTTCCGACGTGCCGAAGGCGCA
CTTCCTGAGGCTCATGAACTGCATGCACCACCGCGAGCTGCAGGGCTCGC
TCGACAGCCTCCACCGGTACTTCGACTACGCGGTCCGAAGGGGCGGGCCG
AGCATGTCAGACGCAGAAGGCTTCCTCGACCTGGCCAAGGGGGCGCCGGG
AGGGAGCGGTCGGCACACCCCGCAGCACGCGGCGCTAGCTCTGGCAAGGC
TCCATTTCGAGCGGGCCGAGCATGTCAGACGCAGAAGGCTTCCTCGACCT
GGCCAAGGGGGCGCCGGGAGGGAGCGGTCGGCACACCCCGCAGCACGCGG
CGCTAGCTCTGGCAAGGCTCCATTTCGAATTCGGACACCTTGAGCTCGCG
TCGCTGGCGCTCGGGGAGGCGATCAGAGTGGCGCAGCAGAGCGGCGACAA
GGCTTGCGTTGCGCAGGCGATGGGGTGGCTGCACCAGGTGCTGGCCGCAC
AGGGGCATCCGAGGGCTGGCGATGTGCTGAGAAGATTCGGACACCTTGAG
CTCGCGTCGCTGGCGCTCGGGGAGGCGATCAGAGTGGCGCAGCAGAGCGG
CGACAAGGCTTGCGTTGCGCAGGCGATGGGGTGGCTGCACCAGGTGCTGG
CCGCACAGGGGCATCCGAGGGCTGGCGATGTGCTGAGAAGGTGTGCTTCC
CAGGCGGCCGATCTTCAGCTGCACCAGCTGATGAACTCGGCAATCCTGCT
CCTCGCAAAGGAGGCAGCGGCGGCGAAGCACGGGAATCCCACCCACGGCA
GCAGCGGCAGCAGCAGCAGCAACAACAACAACGGTGGCGATGGCAGCAAC
GGCAGCAGCAGCAGCGCCTCCGTGGCGGCATCGTCGATGGGGGGAGGGGG
GCGGCGAAATCGAGCGTCCCCGACCCGGGTGTGGGAGTGTCTCGCTGCGG
TCGCTTCCGGCGACTTACGGGGCCTCCTCGAGAGCGAGGCGGCGAGCGCA
GGCGCCGGGCTGCTGGACAGCATGGCAGCGTCTGGGGCCGGGGGCGGCGG
CCGGCCGGCGGTGGAGCTGAGAGGGGGCACGGGGGGCGAGGTCGCGGCGG
GACTGTCCTGCCAGCGGCTGTTGGTGGAGGCCGGGGCCTTCGAGAGGTTC
GGGTACTCGGACATGGCGGTGGCTTGCGCCCGCTCGGTCTTGCAGGTGTG
CTTCCCAGGCGGCCGATCTTCAGCTGCACCAGCTGATGAACTCGGCAATC
CTGCTCCTCGCAAAGGAGGCAGCGGCGGCGAAGCACGGGAATCCCACCCA
CGGCAGCAGCGGCAGCAGCAGCAGCAACAACAACAACGGTGGCGATGGCA
GCAACGGCAGCAGCAGCAGCGCCTCCGTGGCGGCATCGTCGATGGGGGGA
GGGGGGCGGCGAAATCGAGCGTCCCCGACCCGGGTGTGGGAGTGTCTCGC
TGCGGTCGCTTCCGGCGACTTACGGGGCCTCCTCGAGAGCGAGGCGGCGA
GCGCAGGCGCCGGGCTGCTGGACAGCATGGCAGCGTCTGGGGCCGGGGGC
GGCGGCCGGCCGGCGGTGGAGCTGAGAGGGGGCACGGGGGGCGAGGTCGC
GGCGGGACTGTCCTGCCAGCGGCTGTTGGTGGAGGCCGGGGCCTTCGAGA
GGTTCGGGTACTCGGACATGGCGGTGGCTTGCGCCCGCTCGGTCTTGCAG
GTACACGGCGACCTCGCCACAGCATCGAACGTCGAGCTAGCCTCCGCCTG
CGTCATGAACGCCGTTCTTCGAGGGAAGAGCTTCCCCGGCCTTCCGGAGT
CCCTCCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCACCAGTCT
CGGGGCAGCGGGGATGGTGCGGCGGAGGACGCAGCAGCAGCGGAGGAGGA
GAAGAAAGGGGGGATTAAGGGCGAGAGGGAGGGGGAGAACGGGGAGTGTG
CGTGTGTGTTCGAGGTGGCGCTGTCGGTGGCGCTGCGGCAGCACGAGGAG
TTCCCGCACCCGGTGTCGAATGTGTGGGCCGCGGGCGTGATGGTGCTGCT
CCACGAGTGGATGGTCAACCGAGGGGAGTTTCGTGCCGCTGAAGGGTACA
CGGCGACCTCGCCACAGCATCGAACGTCGAGCTAGCCTCCGCCTGCGTCA
TGAACGCCGTTCTTCGAGGGAAGAGCTTCCCCGGCCTTCCGGAGTCCCTC
CCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCACCAGTCTCGGGG
CAGCGGGGATGGTGCGGCGGAGGACGCAGCAGCAGCGGAGGAGGAGAAGA
AAGGGGGGATTAAGGGCGAGAGGGAGGGGGAGAACGGGGAGTGTGCGTGT
GTGTTCGAGGTGGCGCTGTCGGTGGCGCTGCGGCAGCACGAGGAGTTCCC
GCACCCGGTGTCGAATGTGTGGGCCGCGGGCGTGATGGTGCTGCTCCACG
AGTGGATGGTCAACCGAGGGGAGTTTCGTGCCGCTGAAGGGCTGGGCATG
AGCCTCCGGGGCTGTTGTCCCCTGAACCGAGGAGCAGAGGCGTTTGTCGA
GGCGCACCTGCAGAGGGTTCGGCTTCTCAGGGCACAGGGCAGGCTGGGCA
TGAGCCTCCGGGGCTGTTGTCCCCTGAACCGAGGAGCAGAGGCGTTTGTC
GAGGCGCACCTGCAGAGGGTTCGGCTTCTCAGGGCACAGGGCAGGTGGAG
TGAAGCCGTGGAGTCGGCCTCCGAGCTGGTCAAGCTCAGCGACACTCGAG
GCCTCGCGCCGCAGTACGCGCGTCTCTTGCTGGAGCTATCTCGAGCGCGG
CTGGGGGCGGAGCCGGCGTCTCCGGTGGGAGCGCTGCCGCACGCGCTGCG
GTGCCTGGCGGTGTGCGAGAGCTACTCGCTCGACGCGATCCACGCCTCGG
CGATGACTCACCTCGCGGAGGTGGAGTGAAGCCGTGGAGTCGGCCTCCGA
GCTGGTCAAGCTCAGCGACACTCGAGGCCTCGCGCCGCAGTACGCGCGTC
TCTTGCTGGAGCTATCTCGAGCGCGGCTGGGGGCGGAGCCGGCGTCTCCG
GTGGGAGCGCTGCCGCACGCGCTGCGGTGCCTGGCGGTGTGCGAGAGCTA
CTCGCTCGACGCGATCCACGCCTCGGCGATGACTCACCTCGCGGAGGTGC
ACCTCCGAATGGGCTCGAGCCGACGGGCGCGCATCCTTCTCAAGGCCTGC
CTTGGACAGCTCCTGGCCAACGCCCCCGTGCAGTCCCAGGGAGAAGCCTG
GCTGGCGATGGCAAAGTGCGAGATGGCGGAAGTTTCCCTGGAAGATGATC
CACGTCCGCCCGCCGCAAGAACGAGCGGTTCTAGTGAGAACGGGGGCGCG
GTTGACGAAACCGGGGATGACGGGCGGGGGGGGGCGGGGGCGGAGATAGG
GGCAGGGGGGATGGCGCTGCGAGGGGGAGCCCTGAAACAGGCAGTGCTTC
ATCTGAACCGAGCGATCGCGATGCTGAAGCGTTGCCACGACTTCGCTGGG
CTGCGGGAGTGCTTCTATCTGAGGGTGCACCTCCGAATGGGCTCGAGCCG
ACGGGCGCGCATCCTTCTCAAGGCCTGCCTTGGACAGCTCCTGGCCAACG
CCCCCGTGCAGTCCCAGGGAGAAGCCTGGCTGGCGATGGCAAAGTGCGAG
ATGGCGGAAGTTTCCCTGGAAGATGATCCACGTCCGCCCGCCGCAAGAAC
GAGCGGTTCTAGTGAGAACGGGGGCGCGGTTGACGAAACCGGGGATGACG
GGCGGGGGGGGGCGGGGGCGGAGATAGGGGCAGGGGGGATGGCGCTGCGA
GGGGGAGCCCTGAAACAGGCAGTGCTTCATCTGAACCGAGCGATCGCGAT
GCTGAAGCGTTGCCACGACTTCGCTGGGCTGCGGGAGTGCTTCTATCTGA
GGGCCCGCGTGTGCGAGAAAATCGTGTCCGAGGGCGGCGAAAGCTTGGAC
CAGGCCAAGGCTACCGCAGAGCGTGACGCCTCGGCCAGAGATTTTTTGGC
GGTTTCAAAAGCCGGGGTCTGGGCTCTGCTGTCCCCATCCCCGGGCCTGA
AGATCGGGCCCGCGGAAGTTCAGCGGTACATTGAGGCTTCTATGTCTGCG
ATCCCGTGGGGGTAAGCCCGCGTGTGCGAGAAAATCGTGTCCGAGGGCGG
CGAAAGCTTGGACCAGGCCAAGGCTACCGCAGAGCGTGACGCCTCGGCCA
GAGATTTTTTGGCGGTTTCAAAAGCCGGGGTCTGGGCTCTGCTGTCCCCA
TCCCCGGGCCTGAAGATCGGGCCCGCGGAAGTTCAGCGGTACATTGAGGC
TTCTATGTCTGCGATCCCGTGGGGGTAA
back to top