mRNA_L-elsbetiae_contig17660.4988.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: D8LDR6_ECTSI (1,3-beta-glucan-binding protein, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR6_ECTSI) HSP 1 Score: 230 bits (586), Expect = 3.320e-72 Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 1 Query: 1 ASGGAINILQSRNEMSRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGGLIDD 363 ASGGAINIL++RNEMSR HGQL+FGG+YPDV+ LDLSEGGHCYSDLH+DLSEDYHVYALEWE S RWY+DG+L+CDR WYSRPGPGEED+PFPAPFDT FYLIMNVAVGG FTGGLID+ Sbjct: 270 ASGGAINILEARNEMSRVHGQLAFGGAYPDVEKLDLSEGGHCYSDLHDDLSEDYHVYALEWETDSFRWYLDGVLYCDRHYWYSRPGPGEEDYPFPAPFDTSFYLIMNVAVGGDFTGGLIDE 390
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A6H5L3A1_9PHAE (GH16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A1_9PHAE) HSP 1 Score: 231 bits (590), Expect = 2.540e-69 Identity = 102/121 (84.30%), Postives = 113/121 (93.39%), Query Frame = 1 Query: 1 ASGGAINILQSRNEMSRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGGLIDD 363 ASGGAINIL++RNEMSRAHGQL+FGG+YPDV+ LDLSEGGHCYSDLH+DLSEDYHVYALEWE S RWY+DG+L+CDR WYSRPGPGEED+PFPAPFDT FYLIMNVAVGG FTGGLID+ Sbjct: 265 ASGGAINILEARNEMSRAHGQLAFGGAYPDVEKLDLSEGGHCYSDLHDDLSEDYHVYALEWETDSFRWYLDGVLYCDRHYWYSRPGPGEEDYPFPAPFDTSFYLIMNVAVGGDFTGGLIDE 385
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A7Y2U344_9GAMM (Glycoside hydrolase family 16 protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2U344_9GAMM) HSP 1 Score: 96.3 bits (238), Expect = 2.090e-21 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 1 ASGGAINILQSRN----EMSRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTG 348 A+ G I+++++ N + HG L +GG +P+ S G + D + D+HVYALEW+A MRWYVDG+L+ + +WYS P +PAPFD FY+++NVAVGG F G Sbjct: 185 AASGEIDVMEAVNLGGAGGNTVHGTLHYGGEWPNNVFTGESYG------VPTDATTDFHVYALEWDATEMRWYVDGVLYAMQNAWYSTSAP------YPAPFDQPFYILLNVAVGGNFPG 292
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A2W4MH21_9FIRM (GH16 domain-containing protein (Fragment) n=1 Tax=Caldicoprobacter oshimai TaxID=551788 RepID=A0A2W4MH21_9FIRM) HSP 1 Score: 97.4 bits (241), Expect = 4.550e-21 Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 1 ASGGAINILQSRNEM-SRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGGLI 357 A+ G I+I+++R + + G + +GGS+P+ + + GG +D++ D+H YA+EWE G +RWYVDG L+ +WYS+ + FPAPFD FY+I+N+A+GG F GG + Sbjct: 199 AASGEIDIMEARGRIPNEVWGTIHYGGSWPN----NTNNGGKYVFPEGQDIT-DFHEYAIEWEPGEIRWYVDGELYLTLNNWYSQGENQAAKYSFPAPFDQEFYIILNLAIGGNFDGGRV 313
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A7X8MIS8_CLOSP (Family 16 glycosylhydrolase n=1 Tax=Clostridium sp. TaxID=1506 RepID=A0A7X8MIS8_CLOSP) HSP 1 Score: 96.3 bits (238), Expect = 1.220e-20 Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 10 GAINILQSRNEM-SRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTG 348 G I+I++ + ++ HG L FG + + Q G + D DYHVYA+EWE G +RWY+DG L+ WYSR +D+ +PAPFD F+LIMN++VGG + G Sbjct: 556 GEIDIMELLGHIPNKLHGTLHFGEPHKESQGTYFLPEGQSFGD-------DYHVYAIEWEPGEIRWYIDGELYHTENDWYSRDPYLADDYTYPAPFDQNFFLIMNISVGGSWPG 662
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A369BB68_9BACL (S-layer family protein n=1 Tax=Fontibacillus phaseoli TaxID=1416533 RepID=A0A369BB68_9BACL) HSP 1 Score: 95.9 bits (237), Expect = 1.670e-20 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 ASGGAINILQSRNEMSRAH-GQLSFGGSYPDV----QSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGG-LIDD 363 AS G I+I++SR + + G L +GG P+ Q L GG + D+H YA+EWE G +RWY+DGIL + WYS + +PAPFD FY+I+N+A+GG F GG ++DD Sbjct: 521 ASSGEIDIMESRGRLPKVGLGTLHYGGEAPNNRYSGQEYPLPNGG---------TATDFHTYAIEWEPGEIRWYIDGILCQTQNDWYSISKDQAANNAYPAPFDQDFYMILNLALGGNFDGGQMVDD 638
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A850EW13_9BACL (Carbohydrate binding domain-containing protein n=1 Tax=Paenibacillus agri TaxID=2744309 RepID=A0A850EW13_9BACL) HSP 1 Score: 95.9 bits (237), Expect = 1.710e-20 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 ASGGAINILQSRNEMSRA-HGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGGL 354 A+ G I+I+++R + G L +G S P+ ++ GGH Y+ + D+H YA+EWE G +RWYVDG+LF +WYS E +PAPFD +Y+I+N+AVGG + GGL Sbjct: 1784 AASGEIDIMEARGRVPNVVDGTLHYGKSSPNNKA----SGGH-YTFPEGESFTDFHTYAVEWEPGEIRWYVDGVLFFKESNWYSWSTGQPEKNAYPAPFDEPYYMILNLAVGGNYDGGL 1897
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A4Y8PT53_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus athensensis TaxID=1967502 RepID=A0A4Y8PT53_9BACL) HSP 1 Score: 95.5 bits (236), Expect = 2.280e-20 Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 1 ASGGAINILQSRNEMSR-AHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTGGLI 357 AS G I+I++++ + +G + +G YP G Y + DYHVY+LEWE G MRWYVDG L+ + WYS+ + +PAPFD F+LI+N+A+GG F GG++ Sbjct: 661 ASSGEIDIMENKGRLPHEVYGTIHYGEQYPGNTYT-----GKAYQFPNNGTVADYHVYSLEWEPGEMRWYVDGQLYQTQNDWYSKSLNQPANNTYPAPFDKPFHLILNLALGGNFDGGIV 775
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: A0A4Q0I4E5_9FIRM (Glycosyl hydrolase n=1 Tax=Acetivibrio mesophilus TaxID=2487273 RepID=A0A4Q0I4E5_9FIRM) HSP 1 Score: 95.1 bits (235), Expect = 3.090e-20 Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 10 GAINILQSRNEM-SRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTG 348 G I+I++ + ++ HG L FG + + Q G + D DYHVYA+EWE G +RWY+DG L+ WYSR +D+ +PAPFD F+LIMN++VGG + G Sbjct: 550 GEIDIMELLGHIPNKLHGTLHFGEPHKESQGTYFLPEGQSFGD-------DYHVYAIEWEPGEIRWYIDGELYHTVNDWYSRDQYLADDYTYPAPFDQNFFLIMNISVGGSWPG 656
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Match: UPI001F1F8544 (carbohydrate binding domain-containing protein n=1 Tax=Clostridium hydrogenum TaxID=2855764 RepID=UPI001F1F8544) HSP 1 Score: 94.7 bits (234), Expect = 4.110e-20 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 37 NEMSRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLSEDYHVYALEWEAGSMRWYVDGILFCDRKSWYSRPGPGEEDFPFPAPFDTGFYLIMNVAVGGGFTG 348 N+ S +G + +G + Q G + LS+DYHVYA+EWE G +RWY+DGIL+ +W+S+ + F +PAPFD FY+I+N+AVGG + G Sbjct: 321 NQPSTVYGTIHYGNPHGSSQGTYTLPDG-------KKLSDDYHVYAIEWEPGEIRWYIDGILYHKESNWFSKDTNAADSFTYPAPFDRNFYIILNLAVGGDWPG 417 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17660.4988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17660.4988.1 >prot_L-elsbetiae_contig17660.4988.1 ID=prot_L-elsbetiae_contig17660.4988.1|Name=mRNA_L-elsbetiae_contig17660.4988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp ASGGAINILQSRNEMSRAHGQLSFGGSYPDVQSLDLSEGGHCYSDLHEDLback to top mRNA from alignment at L-elsbetiae_contig17660:6..3283+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17660.4988.1 ID=mRNA_L-elsbetiae_contig17660.4988.1|Name=mRNA_L-elsbetiae_contig17660.4988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3278bp|location=Sequence derived from alignment at L-elsbetiae_contig17660:6..3283+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17660:6..3283+ >mRNA_L-elsbetiae_contig17660.4988.1 ID=mRNA_L-elsbetiae_contig17660.4988.1|Name=mRNA_L-elsbetiae_contig17660.4988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig17660:6..3283+ (Laminarionema elsbetiae ELsaHSoW15)back to top |