mRNA_L-elsbetiae_contig1766.4987.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1766.4987.1
Unique NamemRNA_L-elsbetiae_contig1766.4987.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 7.570e-179
Identity = 295/407 (72.48%), Postives = 335/407 (82.31%), Query Frame = 1
Query:    1 DPRVARGNTFAGDRRSDGPP-EPRPKASTKVKRS-LGHSRSRGSSSSFFEQNTSQPFLRQELDLSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKSWVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLEAVDETAETARILRVETRRREAEARQEADRISRERLVRLFVPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIEELAVPDGGFLAGYLREARRRGGGRRVGKQSLLLEVQDNMGGPTEEVLLQANFESS 1215
            DPRVARGNTFAGDRR   P  EP PK   K  R  LG SRSRGSSSSFF+   SQP LR+ELDLS YLVEPG+   RPE+E DTQTD F+ERPQTPD+VPKKTGVDA TQIEVSDKLFDFEAEVQPMLAVLVGKT+EQAR+EVEREHEL CIREAATAL  QRAEE QQVLELK+AAVEAE+      XXXXXXX RRR+AKEKVACLQLVRQVLPLSLDRAFE+LSAKSW   S+ QIK  FLPWLF RV AD GQR+ V D +D LLE+VDETAETAR  R++ R REAEAR+EA R++RER++RLFVP E+VGG+EGERLGPV V+AG+TV   EA+VA WLAKE E  EL  P GGFL GYLREARR+GGGRRVG+ S+LL++Q  +G P++EV+L++NFE +
Sbjct:   56 DPRVARGNTFAGDRRDAQPSAEPGPKTVAKKSRKRLGQSRSRGSSSSFFDTRASQPVLREELDLSRYLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKTLEQARMEVEREHELLCIREAATALVHQRAEEVQQVLELKQAAVEAEKXXXXXXXXXXXXXNRRRLAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWETQSVQQIKKVFLPWLFGRVAADVGQRSSVLDALDSLLESVDETAETARNQRIQDRDREAEARREAARVARERVIRLFVPGEVVGGEEGERLGPVAVKAGETVKAAEAKVARWLAKERETGELEDPQGGFLGGYLREARRKGGGRRVGQGSMLLDLQVMLGAPSDEVVLRSNFEGT 462          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A6H5KBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC6_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 4.360e-130
Identity = 217/344 (63.08%), Postives = 255/344 (74.13%), Query Frame = 1
Query:  184 LSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKSWVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLEAVDETAETARILRVETRRREAEARQEADRISRERLVRLFVPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIEELAVPDGGFLAGYLREARRRGGGRRVGKQSLLLEVQDNMGGPTEEVLLQANFESS 1215
            +  YLVEPG+   RPE+E DTQTD F+ERPQTPD+VPKKTGVDA TQIEVSDKLFDFEAEVQPMLAVLVGK                                   VLELK+AAVEAE++KE   XXX      RR+AKEKVACLQLVRQVLPLSLDRAFE+LSAKSW   S+ QIK  FLPWLF RV AD GQR+ V D +  LLE+VDETAETARI R++ R REAE R+EA R +RER++RLFVP E+VGG+EGERLGPV V+AG+TV   EA+VA WLA E E EEL +P GGFL GYLREARR+GGGRRVG+ S+LL++Q  +G P++EV+L++NFE +
Sbjct:   17 VPGYLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK-----------------------------------VLELKQAAVEAEKKKEXXXXXXREEANHRRLAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWQTQSVQQIKKVFLPWLFGRVAADLGQRSSVLDALGSLLESVDETAETARIQRIQDRDREAETRREAAREARERVIRLFVPGEVVGGEEGERLGPVAVKAGETVKAAEAKVASWLAIERETEELEIPQGGFLGGYLREARRKGGGRRVGQGSMLLDLQAMLGAPSDEVVLRSNFEGT 325          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A835YQI5_9STRA (Radial spoke protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.160e-30
Identity = 137/393 (34.86%), Postives = 190/393 (48.35%), Query Frame = 1
Query:    1 DPRVARGNTFAGDRRSDGPPEPRPKASTKVKR-----SLGHSRSRGSSSSFFEQNTSQPFLRQELDLSSYLVEPGEGRDRPEQEVD-----------------------TQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKS-WVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLEAV---DETAETARILRVETRRREAEARQEADRISRERLVRLFVPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIEELAVPDGGFLA 1083
            DPRVAR NT+A  RR   PP     +S K  +     S+   R+  S+  +     +    +QELDLS YLV P      P+ E D                       TQTD F E+P    Y     G DA+T++ ++ +LFDF+ E++P+L VL+GKT+EQA++EVER  EL+ I +A      +R  E +   +L+ AA+E         XXXXXX   R  A +KVA + ++RQ  P  L  A E L A   W  P    I  +F+PWL + VGA AG  +      D L E      E    A    V+   +EA A   A   +     +L+V    VG  EG +LGPVTV    ++  VE  +A+W  + G   E  VP+GGFL+
Sbjct:   53 DPRVARVNTYA--RRPVLPPIGTASSSKKRVKPGRVVSIASQRAALSAQLYDPNYGTYNNQKQELDLSKYLVAP-----EPQIEDDASERINRQRAPASMPFYGFSDSVTQTDEFAEKPDEVYYKQPLGGADAATEV-INTELFDFDREIKPLLDVLIGKTLEQAKLEVERSWELQQIAQATDRFNAERVAEARAQEQLEAAAIERXXXXXXXXXXXXXXALSRWQATQKVAAVCMMRQCWPGVLRGACEALRAAGRWCEPRAIDIADEFMPWLLDSVGARAGALSAAYAVTDGLCEEALRRGEALAEAHEAAVQREAKEAAAASAAAGAT----TQLWVEGAAVGL-EGGKLGPVTVTNDSSIAAVEKSIADWFEENGLAAE--VPEGGFLS 430          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: F0Y5T0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5T0_AURAN)

HSP 1 Score: 117 bits (293), Expect = 7.970e-26
Identity = 104/282 (36.88%), Postives = 143/282 (50.71%), Query Frame = 1
Query:    1 DPRVARGNTFAGDRRSDG---------PPEPRPKASTKVKRSLGHSRSRGSSSSFFEQNTSQPFLRQELDLSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREK----EELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAK-SWVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLE 804
            DPRV RG+T++  R   G         PP P    + K +R     + +    S F+   S    +Q LDL+ YLVE        E+    QTD F E+P    + P KTGVDAST +E  D+ F F  EVQP+LAVLV KT+EQA +EVE+E EL  I +  +    ++A E  +V  +++A V+ E+ K    E  R       T  R    KVA  +LV Q+LP   + A+     + SWV P +H+IK   LPWL+ RV  + G        VD LL+
Sbjct:   47 DPRVVRGSTYSLYRSLPGDGAPMEDTVPPTPGGAPARKARRK----KKKADGRSIFDAKPSSN-SKQALDLTPYLVEKEYASSAVEEAA--QTDGFLEQPPPAPFAPPKTGVDASTSME-DDQPFVFNNEVQPLLAVLVSKTLEQAMLEVEQEEELAAIADDMSDKLARQAAEKARVEAMEQAEVDREKAKLGDFESARAALVEEQTLAR----KVASSRLVDQLLPEIFEGAYRHFEDRGSWVEPVLHEIKATTLPWLYARVDEELGGADLGAKLVDDLLQ 316          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A2R5GXC9_9STRA (Radial spoke head protein 3-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXC9_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.260e-25
Identity = 102/314 (32.48%), Postives = 159/314 (50.64%), Query Frame = 1
Query:  169 RQELDLSSYLVEPGEGRDRPEQEV--DTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAAT--ALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDR-AFEELSAKSWVAPSIHQIKTD-FLPWLFERVGADAGQRACVRDTVDHLL-EAVDETAETARILRVETRRR---EAEARQEADRISRERLVRLFVPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIEELAVPDGGFL 1080
            R  +D+SS LVE    ++ P Q V  DTQTD F E+P++P Y P+KTGVD  TQIE   +LF+F+ EV+P+L ++V KT+EQ+ +EV +E E+  +  A       RQR    Q+  E  E  ++   EKE L+        R  V  +K A  +  +  L   L+  A   L A       +    T+ FLP+L + VGA   +R       D +L  A+ +  + A   R     R   EA A  EA    ++R +R+++  E + G EG  LGP+ +   +++   E  + EW+ +      ++ P+GG+L
Sbjct:    7 RGHIDISSNLVE----QEEPVQTVGMDTQTDTFHEKPESPPYAPRKTGVDVGTQIEDQTELFNFDVEVEPILNIIVTKTLEQSLLEVRQEEEIAQLARAKAHHLAERQRIRAEQEARERLE--MQRWTEKEALKRQESGRLARELVLCKKAAANRFFQMNLGAQLEASAIRNLEASGHFRDELRDEVTEVFLPFLEDAVGALVERRENASSLADEILGHALSKRRQRALAYRQAIHDRKAAEALAAAEARTKEKQRRIRIYLRGEDILGTEG-MLGPIELHVHESIAAAERAIQEWIDENVLDTTVSAPEGGYL 313          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A7S2WAG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAG1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.600e-23
Identity = 93/258 (36.05%), Postives = 144/258 (55.81%), Query Frame = 1
Query:  178 LDLSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLD---RAFEELSAKSWVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLE---AVDETAETARILRVETRRREAEARQEADRISRER-LVRLFVPA 930
            +D + +LVE  E  +     V TQTD  +  P    ++PKKTG+DASTQ+   D+ F F+ +V P+L V+V KT+EQ+ +EVE+E EL+ +      L + + EE ++V  L+ A+V+         XXXXXXX      K+K+A L+L++QV P  ++   +  EEL   +W  P  H I+ D LPWL+++V  +  +R      VD LL       E A  ARI  V+     AE  +EA R ++++  +R+F+ A
Sbjct:    5 VDFTEFLVEQQE--ETTSAVVQTQTDLMDLLPMEKPFIPKKTGIDASTQMTAEDQPFHFDRDVSPLLHVMVQKTLEQSLLEVEQEEELQALAADLARLEQAKKEEDERVAALEAASVKKFXXXXXXXXXXXXXXXXXNRLKKKIASLRLMKQVWPEVVEDVAQGLEELG--TWRPPITHIIRRDVLPWLYKQVDDELRRRREAEKLVDDLLRFTVTAHEEAAQARIAAVQ-----AEKEEEATRKAKKQGWIRIFLQA 253          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A067CH65_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH65_SAPPC)

HSP 1 Score: 108 bits (271), Expect = 9.250e-23
Identity = 118/371 (31.81%), Postives = 179/371 (48.25%), Query Frame = 1
Query:    1 DPRVARGNTFAGD-----RRSDGPPEPR-PKASTKVKRSLGHSRSRGSSSSFFEQNTSQPFLRQELDLSSYLVEPGEGRDRPEQEVDTQTDAF--EERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKS-WVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLE-AVDETAETARILRVETRRREAEARQEADRISRERLVRLF-VPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIEELAVPDGGFL 1080
            DPRVARG+ +A       +R   PP P  P  +  VK++           S +E  TS       +DL+++LVE     +    +V TQTDAF   ++ + P +V KKTG+DAST+I   D LF+F+AEVQP+L VLV KT++QAR EVERE EL  I    + L  ++  E   V +L EAAV A+  KE              + ++KVA L++  ++L  ++  A  +L     +  P    ++T F+ W++ +  A           +D LLE ++ +    A + R+ T         +   +   R V L+ VPA          +GP+      T  ++EA +  WL       EL  PDGG+L
Sbjct:   37 DPRVARGSVYAAANSIHLKRDAAPPAPTAPPPTVPVKKN-----------SIYEPPTSLSTYIP-VDLTAFLVEQTPTIES--LDVQTQTDAFLPNDKHKKP-FVLKKTGIDASTEILEEDGLFNFDAEVQPLLNVLVNKTLQQARAEVERETELHHISLYLSDLHVKKRVEADGVAKLVEAAVAAQEAKERETTERAQRLAEMDILQQKVAALKVGHRLLDDAIANADAQLRKNGVFYDPLKRLVETGFMKWMYTQADAAVDAHLVTHALLDDLLEYSLHKQRILATLARLPTT-------GDGCLLLDARHVDLWNVPA----------VGPIAYSPRHTFAVIEAHIEAWLQGNESTAELPRPDGGYL 375          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A7R9UC15_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC15_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.770e-22
Identity = 129/443 (29.12%), Postives = 196/443 (44.24%), Query Frame = 1
Query:    1 DPRVARGNTF--------AGDRRSDGPPEPRPKASTKVKRSLGHSRSRGSSSSFFEQNTSQPFLRQELDLSSYLVEPGEGRDRPEQ-EVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSA-----KSWVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLEAVDETAETARILRVETRRREAEARQEADRISRER-LVRLFVPAELVG-------------------GDEGER--------LGPVTVQAGDTVTIVEARVAEWLAK-----EGEIEELAVPDGGFLA--GYLREARRRGGGRRVGKQSLLLEVQDNMGGPTE 1182
            DPRV RGNT+        AG R++  P      A  K  RSL  +  RG    F  ++  +P  RQ +DLS+YLVE  +   RPE  +V+T  D F   P    Y+P KTGVD  TQI  SD+LF F+ EV+P+L VL+ K++EQA++E+E   EL  I    +A      +E + + +L+ + +E  + K +         TRRR   E++A        + +  +R   E SA     KS   P   ++   FLP+L + V   + + A   + +D  L       E A      T R+E   RQE +   R +  + + V    +G                   GD  +         +GP+ V   +TV  VE R+  W+       +  +  LA   GG L    Y  +A     G+ V +   +L+ Q +   P+E
Sbjct:   36 DPRVVRGNTYSESFRMRHAGSRKASQPSRGPSNAEGKAARSLRQAMPRGDV--FAHKDVEKP--RQRIDLSAYLVEQAK---RPETYDVETTIDPFLPLPPPEPYIPAKTGVDVETQISSSDELFQFDEEVKPLLDVLISKSVEQAKLELEHTAELAAIDADLSAYQDAVEDEKRAIGQLETSIIERAKAKAKALRERKEEATRRRDQAEQLA--------MAIYENRLHVEASALKKYLKSLEDPVADEVMAKFLPYLVDEVATQSERVADADELLDGALHDALGKGEVASRHSAGTWRQELARRQELEAKKRRKGTISVKVAGAALGLSEETKEDDAEEEXXXAKEGDGNQEPQEPSVVVVGPLAVAGLETVEEVEKRIQRWITDNVPGGQWPVGLLAASLGGQLRPDSYFLDAELPEDGQLVVQSHSVLDDQISPADPSE 463          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A8K0CT85_9COLE (Uncharacterized protein (Fragment) n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CT85_9COLE)

HSP 1 Score: 102 bits (255), Expect = 5.280e-21
Identity = 82/226 (36.28%), Postives = 114/226 (50.44%), Query Frame = 1
Query:  226 PEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKSWVAPSIHQ-IKTDFLPWLFERVGADAGQRACVRDTV-DHLLEAVDETAETARILRVETRRREAEARQEADRIS 897
            P ++V TQTD F +RP +P YVP KTG DA TQI   D LFDF+ EVQP+L VLVGKTIEQA IEV  E EL  +RE        RA E  +   L+E     + EK             ++  +E++A   L++  +   L    E L  + ++  +I Q +   F+PWL + V  +  +    RD + D + E ++  AE  R L  E    E E     D I+
Sbjct:   63 PVEDVCTQTDLFLDRPVSPFYVPAKTGADAETQIYPGD-LFDFDMEVQPILEVLVGKTIEQALIEVLEEEELAALREQQRRFLEMRAAETAEAQRLEERERRLQTEKMRRMKDHEEGLKYQKEMEERIAAAVLMQGYMADLLPSVLEGLEQEGFLVDNIKQDVDEAFMPWLMKEVTQELQEMVSSRDVLTDIVREILENRAELYRALYQEPEESEEEGEPTQDDIN 287          
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Match: A0A1Y1HK05_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK05_KLENI)

HSP 1 Score: 104 bits (259), Expect = 7.390e-21
Identity = 102/292 (34.93%), Postives = 147/292 (50.34%), Query Frame = 1
Query:    1 DPRVARGNTFAGDRRSDGPPEPRPKASTKVKRSLGHSRSRGSSSSFFEQNTSQPFL-RQELDLSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKKTGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHEL----------ECIREAATALTRQRAEEGQQVLELKEAAVEAEREKEELRXXXXXXXTRRRVAKEKVACLQLVRQVLPLSLDRAFEELSAKS-WVAPSIHQIKTDFLPWLFERVGADAGQRACVRDTVDHLLE-AVDETAETARI 837
            D RV RG+ +A       PP   P+ +T   R    ++ R SS+   +  T  P L R+ +D+ + L         PE  VDTQTDAF +RPQTP YVP+K+GVD  TQI   D LF+F+ EV+P+L VL+GKT+EQ+ +EV  E EL          E +R A    T++     Q+ L  K   +E ER +             ++ A+EKVA     R  L   +   F+ L+ +  +  P   +I+T F+P+L + V  +  +    R TV  L+E AV   AE  RI
Sbjct:   54 DRRVVRGSNYAPQLL---PPMSPPEEATSENRPAKVTK-RKSSTKLSKPGTPDPVLGRKHIDIQTDLYLEELTDRMPEASVDTQTDAFMDRPQTPLYVPQKSGVDVETQIMEGD-LFNFDFEVEPILEVLIGKTLEQSLMEVMEEEELAAMRAHQEHFEAVRNAELIATQRMEAAEQRKLAEKARRLEQERAR----------ALAQKAAQEKVAAQTFARDYLGGLIAGVFQGLTNEGVFYDPVEREIETQFMPFLHDAVAQELRKTELARATVRALIESAVQSYAEKQRI 330          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1766.4987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP98_ECTSI7.570e-17972.48Flagellar radial spoke protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KBC6_9PHAE4.360e-13063.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQI5_9STRA2.160e-3034.86Radial spoke protein 3-domain-containing protein n... [more]
F0Y5T0_AURAN7.970e-2636.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2R5GXC9_9STRA1.260e-2532.48Radial spoke head protein 3-like n=1 Tax=Hondaea f... [more]
A0A7S2WAG1_9STRA3.600e-2336.05Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A067CH65_SAPPC9.250e-2331.81Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7R9UC15_9STRA5.770e-2229.12Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K0CT85_9COLE5.280e-2136.28Uncharacterized protein (Fragment) n=1 Tax=Ignelat... [more]
A0A1Y1HK05_KLENI7.390e-2134.93Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1766contigL-elsbetiae_contig1766:19237..22378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score517.3
Seed ortholog evalue6.4e-144
Seed eggNOG ortholog2880.D7FP98
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Radial spoke protein 3
EggNOG OGs2BDNM@1,2S132@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRadial spoke 3
Ec32 orthologEc-08_000250.1
Exons5
Model size1221
Cds size1221
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1766.4987.1prot_L-elsbetiae_contig1766.4987.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1766 19237..22378 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815735.7029781-CDS-L-elsbetiae_contig1766:19236..192971622815735.7029781-CDS-L-elsbetiae_contig1766:19236..19297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 19237..19297 +
1691683069.2424471-CDS-L-elsbetiae_contig1766:19236..192971691683069.2424471-CDS-L-elsbetiae_contig1766:19236..19297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 19237..19297 +
1622815735.7147233-CDS-L-elsbetiae_contig1766:19966..200961622815735.7147233-CDS-L-elsbetiae_contig1766:19966..20096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 19967..20096 +
1691683069.2664964-CDS-L-elsbetiae_contig1766:19966..200961691683069.2664964-CDS-L-elsbetiae_contig1766:19966..20096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 19967..20096 +
1622815735.724437-CDS-L-elsbetiae_contig1766:20649..208541622815735.724437-CDS-L-elsbetiae_contig1766:20649..20854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 20650..20854 +
1691683069.277008-CDS-L-elsbetiae_contig1766:20649..208541691683069.277008-CDS-L-elsbetiae_contig1766:20649..20854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 20650..20854 +
1622815735.734101-CDS-L-elsbetiae_contig1766:21144..214561622815735.734101-CDS-L-elsbetiae_contig1766:21144..21456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 21145..21456 +
1691683069.287029-CDS-L-elsbetiae_contig1766:21144..214561691683069.287029-CDS-L-elsbetiae_contig1766:21144..21456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 21145..21456 +
1622815735.7439718-CDS-L-elsbetiae_contig1766:21865..223781622815735.7439718-CDS-L-elsbetiae_contig1766:21865..22378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 21866..22378 +
1691683069.295264-CDS-L-elsbetiae_contig1766:21865..223781691683069.295264-CDS-L-elsbetiae_contig1766:21865..22378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1766 21866..22378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1766.4987.1

>prot_L-elsbetiae_contig1766.4987.1 ID=prot_L-elsbetiae_contig1766.4987.1|Name=mRNA_L-elsbetiae_contig1766.4987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=407bp
DPRVARGNTFAGDRRSDGPPEPRPKASTKVKRSLGHSRSRGSSSSFFEQN
TSQPFLRQELDLSSYLVEPGEGRDRPEQEVDTQTDAFEERPQTPDYVPKK
TGVDASTQIEVSDKLFDFEAEVQPMLAVLVGKTIEQARIEVEREHELECI
REAATALTRQRAEEGQQVLELKEAAVEAEREKEELRRRRREEATRRRVAK
EKVACLQLVRQVLPLSLDRAFEELSAKSWVAPSIHQIKTDFLPWLFERVG
ADAGQRACVRDTVDHLLEAVDETAETARILRVETRRREAEARQEADRISR
ERLVRLFVPAELVGGDEGERLGPVTVQAGDTVTIVEARVAEWLAKEGEIE
ELAVPDGGFLAGYLREARRRGGGRRVGKQSLLLEVQDNMGGPTEEVLLQA
NFESSA*
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mRNA from alignment at L-elsbetiae_contig1766:19237..22378+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1766.4987.1 ID=mRNA_L-elsbetiae_contig1766.4987.1|Name=mRNA_L-elsbetiae_contig1766.4987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3142bp|location=Sequence derived from alignment at L-elsbetiae_contig1766:19237..22378+ (Laminarionema elsbetiae ELsaHSoW15)
GATCCCCGGGTCGCGAGGGGAAACACATTTGCCGGGGATAGGCGAAGCGA CGGCCCGCCCGGTATGTGTGTTATTCGCTGCGGAACATGCGTCAAGCACC TTTTAAAATGCTGAGTTTGAGAGCCGAGAGGGGAGCAGAGGAGGAAGCGA GCCCTGTTGGATCGTATGAGAACTTGCAATGGTCTGAAACTTTCGTAGGT TATCTAACAAACGTACCACGTACTCCTATCTTATCTATATAGTCTAGAGA AGCTATACGTAGTCTAGACTACATAGATATATACGTTCGGGTGCAGTGAC GACTAGATATTGTGCTTCTTCTTCTGCTGTCGTGCATGTACTGCCATGTC ATAGAAGACTTCTAGACATACCAAATACGTACTGCTGTCCATAGATATGT ATGTGTACTACGGTGCAAATATACTGCACCAAGGCTGCACTGTACTTCGT TTTCCGTTGCCAAATCTCGCCGTTCGTACAATGCGCGGAGGGGGCCGAAC ATTAACATTTAATTAAACCATCCGAGGACGCAGGATGATAAAAATCATCT TTAATTAAATACGGGTTGTCGTTGGCTTTTGCGAACGTCAGCTACATCTC AAAAATCCAGCTTGTACTATTTGGGCCTCCTCTACGCCGTTTATGTAGAT ATACACTCTAGACTAAATACTGCTGTTCTCCTCCAACTTTCCTGCTGCTG CCTATTTAACTCGGTTATTTGTCGCGCCAGAGCCACGACCGAAGGCATCA ACGAAAGTAAAAAGGTCTCTCGGGCACAGCCGCTCACGGGGCTCCTCGTC ATCGTTCTTCGAACAGAATACCAGCCAGCCCTTTCTCAGACAAGAACTGG ATTTATCCAGGTACATCATGACTTTTTCTTGCAAATGTGTTTTTTTTCTC TCGCTTTCGTCCCTGTCAGAGGAGAATGCTTAGATAGTGTGTGTACGGTA CACAAACTTCCATCTCACTGTCGACGAGGGAAATGGACGGCTGAACATTT CTCGCGATACAAATCTTAGGCAAGCACCGCAGAAGGTGGGGCGTGGGGGC CTCAGGGAGAGGAGCCTTTCTATGTAACCACGGTTCAGAGTTCAGGCAAG TTGCCCCTGGTGGCAAGGAGAGCCGTTCGAGCGCTGGAATAAATATGAAG ACAAAAAACAAAAAAATGTCGAACGGGTTCTTGAAGCTGATACCCAGCAT TTTGCTGCGGTGCATGCAGTGTGATAGGTGCATAGAATAGAACGCCATCA ACACTCAACAAGGACAATAACTTGTACGATGTACCGCGCTTATTCCAATG TTCGGCTAGCGCCTTTTGGAAGGTTAGATGATGCCCGATGCCCGTTCCCG CCCTCGCCCACAAAACCACTCACAAACAACAACCGATCCGCGAAAACCTT TTGTCGATCACAGCTATCTCGTCGAGCCCGGGGAGGGCCGCGATCGACCA GAGCAGGAAGTAGACACGCAGACCGATGCCTTTGAGGAGAGGCCTCAGAC CCCAGATTATGTTCCGAAGAAGACGGGCGTCGACGCCTCGACGCAGATAG AGGTTTCTGATAAGCTGTTCGACTTCGAGGCGGAGGTCCAGCCGATGCTA GCCGTCTTGGTCGGAAAGGTAAAGCCCGTTTGAGTATCGTTTGACTAGCC CAACTCCATGCCCAGAAACAACTCGCTCCTGTACACCGCGCCAGACTTGT TACCACGTCTCTCTTCCGACTGCTATGCGACGAGCAGATCTGCACGTGGC CAGTTGCTTGAACACGAGGTGGCCGGGTATCCGCCTCCCAACCTTAAAAC GGGATTGTACCGCGTAGTGAAAGCGCGATCGCGAGTCTCCGCCGTGATTG TCCGCGCCGCCCTTTTCTCCGTAATGATCCCCGTTTTACCCTCACCCGTC GAACGCAGACTATTGAACAAGCGCGAATAGAGGTTGAGAGGGAGCACGAA CTGGAGTGCATCCGAGAGGCGGCCACCGCGCTTACGCGGCAAAGGGCGGA AGAGGGGCAGCAAGTGCTGGAGCTGAAGGAGGCGGCGGTGGAGGCCGAGC GCGAGAAGGAGGAGCTGCGCCGACGGCGAAGAGAAGAGGCCACCCGCAGA CGCGTGGCGAAAGAGAAGGTGGCGTGTTTGCAGCTGGTGCGGCAGGTGCT GCCACTCTCGCTGGACCGCGCGTTCGAGGAGCTGAGCGCTAAGTCGTGGG TGGCACCGAGTATCCACCAGGTGCGGGACCACTTGAGAAAGGAAGTGGAG ACAAACTCTTCTTGTAATCTTGGTTGTACGTGTGTTCCGCTGTGTTTTGT CGGGAATCCGGTGGGAGGTTCTGACAAGTAGCATCAAACGGCCTTGGTAT AGACTATACCTTGGGGTAAACATTGACGGGCGTGCTGTGTGAGGCTTCAC CTATTGACACGGCCGTTTGAAGCACCACGGTAAAAATCTGCTCCGGCCTA TAATTGTACGAGAACAACTGTCGTTTGTTCTGTAGATTTGTTACATGCTT ACTCTTTGGGGCCATGTATTTGTCGAACCCCGGGAAATATTTACCTAATC ACGAGTGCATCGGAACGTGAACCGCTGGTGGCCTCACCCGACCCAACGAA CTATGCTGCGCCGCCCGTTCCTACGGCAGATCAAAACCGATTTCTTACCG TGGCTGTTCGAGCGGGTCGGGGCCGACGCGGGCCAACGGGCCTGTGTGCG TGACACCGTCGACCACCTCCTCGAGGCCGTGGATGAAACCGCCGAAACCG CCAGAATCTTACGGGTCGAAACGAGGCGCCGGGAGGCGGAGGCCCGGCAA GAAGCCGACCGCATCTCGCGCGAACGGCTAGTGAGGCTGTTTGTCCCCGC GGAGTTGGTCGGAGGGGACGAGGGTGAGAGACTCGGCCCTGTTACAGTCC AAGCCGGGGATACCGTCACGATCGTAGAGGCTAGAGTTGCCGAGTGGCTG GCTAAAGAGGGAGAGATTGAGGAGCTTGCTGTGCCGGATGGGGGTTTCCT TGCCGGATACTTGCGAGAGGCGAGGAGAAGGGGCGGGGGTCGTCGGGTGG GGAAGCAGTCTTTGTTGCTGGAGGTGCAGGACAATATGGGGGGCCCGACT GAGGAGGTTTTGCTTCAGGCCAATTTTGAGTCTTCGGCGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1766:19237..22378+

>mRNA_L-elsbetiae_contig1766.4987.1 ID=mRNA_L-elsbetiae_contig1766.4987.1|Name=mRNA_L-elsbetiae_contig1766.4987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2442bp|location=Sequence derived from alignment at L-elsbetiae_contig1766:19237..22378+ (Laminarionema elsbetiae ELsaHSoW15)
GATCCCCGGGTCGCGAGGGGAAACACATTTGCCGGGGATAGGCGAAGCGA
CGGCCCGCCCGGATCCCCGGGTCGCGAGGGGAAACACATTTGCCGGGGAT
AGGCGAAGCGACGGCCCGCCCGAGCCACGACCGAAGGCATCAACGAAAGT
AAAAAGGTCTCTCGGGCACAGCCGCTCACGGGGCTCCTCGTCATCGTTCT
TCGAACAGAATACCAGCCAGCCCTTTCTCAGACAAGAACTGGATTTATCC
AGAGCCACGACCGAAGGCATCAACGAAAGTAAAAAGGTCTCTCGGGCACA
GCCGCTCACGGGGCTCCTCGTCATCGTTCTTCGAACAGAATACCAGCCAG
CCCTTTCTCAGACAAGAACTGGATTTATCCAGCTATCTCGTCGAGCCCGG
GGAGGGCCGCGATCGACCAGAGCAGGAAGTAGACACGCAGACCGATGCCT
TTGAGGAGAGGCCTCAGACCCCAGATTATGTTCCGAAGAAGACGGGCGTC
GACGCCTCGACGCAGATAGAGGTTTCTGATAAGCTGTTCGACTTCGAGGC
GGAGGTCCAGCCGATGCTAGCCGTCTTGGTCGGAAAGCTATCTCGTCGAG
CCCGGGGAGGGCCGCGATCGACCAGAGCAGGAAGTAGACACGCAGACCGA
TGCCTTTGAGGAGAGGCCTCAGACCCCAGATTATGTTCCGAAGAAGACGG
GCGTCGACGCCTCGACGCAGATAGAGGTTTCTGATAAGCTGTTCGACTTC
GAGGCGGAGGTCCAGCCGATGCTAGCCGTCTTGGTCGGAAAGACTATTGA
ACAAGCGCGAATAGAGGTTGAGAGGGAGCACGAACTGGAGTGCATCCGAG
AGGCGGCCACCGCGCTTACGCGGCAAAGGGCGGAAGAGGGGCAGCAAGTG
CTGGAGCTGAAGGAGGCGGCGGTGGAGGCCGAGCGCGAGAAGGAGGAGCT
GCGCCGACGGCGAAGAGAAGAGGCCACCCGCAGACGCGTGGCGAAAGAGA
AGGTGGCGTGTTTGCAGCTGGTGCGGCAGGTGCTGCCACTCTCGCTGGAC
CGCGCGTTCGAGGAGCTGAGCGCTAAGTCGTGGGTGGCACCGAGTATCCA
CCAGACTATTGAACAAGCGCGAATAGAGGTTGAGAGGGAGCACGAACTGG
AGTGCATCCGAGAGGCGGCCACCGCGCTTACGCGGCAAAGGGCGGAAGAG
GGGCAGCAAGTGCTGGAGCTGAAGGAGGCGGCGGTGGAGGCCGAGCGCGA
GAAGGAGGAGCTGCGCCGACGGCGAAGAGAAGAGGCCACCCGCAGACGCG
TGGCGAAAGAGAAGGTGGCGTGTTTGCAGCTGGTGCGGCAGGTGCTGCCA
CTCTCGCTGGACCGCGCGTTCGAGGAGCTGAGCGCTAAGTCGTGGGTGGC
ACCGAGTATCCACCAGATCAAAACCGATTTCTTACCGTGGCTGTTCGAGC
GGGTCGGGGCCGACGCGGGCCAACGGGCCTGTGTGCGTGACACCGTCGAC
CACCTCCTCGAGGCCGTGGATGAAACCGCCGAAACCGCCAGAATCTTACG
GGTCGAAACGAGGCGCCGGGAGGCGGAGGCCCGGCAAGAAGCCGACCGCA
TCTCGCGCGAACGGCTAGTGAGGCTGTTTGTCCCCGCGGAGTTGGTCGGA
GGGGACGAGGGTGAGAGACTCGGCCCTGTTACAGTCCAAGCCGGGGATAC
CGTCACGATCGTAGAGGCTAGAGTTGCCGAGTGGCTGGCTAAAGAGGGAG
AGATTGAGGAGCTTGCTGTGCCGGATGGGGGTTTCCTTGCCGGATACTTG
CGAGAGGCGAGGAGAAGGGGCGGGGGTCGTCGGGTGGGGAAGCAGTCTTT
GTTGCTGGAGGTGCAGGACAATATGGGGGGCCCGACTGAGGAGGTTTTGC
TTCAGGCCAATTTTGAGTCTTCGGCGTAAATCAAAACCGATTTCTTACCG
TGGCTGTTCGAGCGGGTCGGGGCCGACGCGGGCCAACGGGCCTGTGTGCG
TGACACCGTCGACCACCTCCTCGAGGCCGTGGATGAAACCGCCGAAACCG
CCAGAATCTTACGGGTCGAAACGAGGCGCCGGGAGGCGGAGGCCCGGCAA
GAAGCCGACCGCATCTCGCGCGAACGGCTAGTGAGGCTGTTTGTCCCCGC
GGAGTTGGTCGGAGGGGACGAGGGTGAGAGACTCGGCCCTGTTACAGTCC
AAGCCGGGGATACCGTCACGATCGTAGAGGCTAGAGTTGCCGAGTGGCTG
GCTAAAGAGGGAGAGATTGAGGAGCTTGCTGTGCCGGATGGGGGTTTCCT
TGCCGGATACTTGCGAGAGGCGAGGAGAAGGGGCGGGGGTCGTCGGGTGG
GGAAGCAGTCTTTGTTGCTGGAGGTGCAGGACAATATGGGGGGCCCGACT
GAGGAGGTTTTGCTTCAGGCCAATTTTGAGTCTTCGGCGTAA
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