mRNA_L-elsbetiae_contig17659.4986.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: D7FVD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD7_ECTSI) HSP 1 Score: 676 bits (1745), Expect = 1.260e-223 Identity = 449/876 (51.26%), Postives = 503/876 (57.42%), Query Frame = 1
Query: 1 TPIVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRG------KPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEAWQLLPRASSSRS-PRSDGLPRRPRETEVTRPGQPQGGGRGAKGRRDMERSKAGAQAHDRRIGGGGHNVDLSPQPAAPVVEQFNSVPHVPRHFGPPAQFVFIPPRQATHAGANMNAGPPPPVLVPGAHHQATREGQPVFVAFPQPFLQTVPHHLRFAHQPQQQYMVPQRQEQPGMLRPHPAVLVPAPGVQVQTHPVFSPQWQ-LQRVSAPTQQGDRQQLGPDHQMSA--RRNTPPSDWRDQTTTARPGVLVAGPEMEARCMSAPRADEAKGSPGADKEHCKGVRRKRPEETRGPATQESMLPWDLPAFVNASPTSSTASLSDFVEDSSKDGQDCQLQYESGADDEVHRGP-----HASSFDGSDHSDAMVDTRHQERSEGLGPGAKSASGNLWANWFLREFFPECCQRYGSGDGFREDLLDHPCQRRSELQEPGSPLPRQPGAPDVLQGASRDVWKSLTAVGEMLREAAGPQTSGCGVKE--AEPGALRGGGAIELDGGEEGQGGGSAAGAVRAHAG----AERRVAQARRAGAVAPARTGGDRPAPSPDTGGDARGTAVLQPSRQAGEGGNRGRPQRAGGAEAKSDTAELQVSVDDETGYTTSEEQGDREYAT 2565
TPIVTMVVGNVVVDLTENQ GSVAASALLEEADNLIQRNHLFK S+LLLKAWAWCETPRLVG R+LGA+KGGLTSYGLSVMVLHLFA ASAD LVHPLDVL+RFFEVYSEFDW R+CLTLDGPVP SVR +HP G G T+SR +PLV++VLAE +K++E XX K GRRGRRASR GR S+ E + A A A PHFP RDCNIQDPLNALNNLGHSVTK NL+AL+RAL+ G+++LEAW L+ S SRS P+SDG RRP VQ H F PQWQ LQRV G Q LGPD Q + N P WRDQ AR V + GPE+ SAPR +EA P A+KE C+G RRKR EET Q +LPWDLP+FVNASPTSSTASLSDFVED SKDGQDC+L YESGA+D+VH G SS SDHSD M DTRHQ+R EG G K ASGNLWANWFLREFFPECCQRYGSGDGFR+DLLDHPCQR+S LQE GS PR+P APDVLQGAS +VWKSLT +G M+RE A QT+ KE A+P I G EG+GGG G RAH G E RV QARRA A+A + GDR APS +TG D+RG VL+P+R + E + R QR G + TA QV VDDETGYTTSEEQGDRE +T
Sbjct: 127 TPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGWHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXKAGRRGRRASRVGRLSDRHAEDALPETPRFA--AGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEAWHLVSHPSPSRSHPKSDGALRRPL---------------------------------------------------------------------------------------------------------------------------------------------------------------------VQAHAHFPPQWQQLQRVFPGPHPGGHQ-LGPDQQRFSVVNGNVSPEGWRDQAM-ARSDVCIVGPEIATSHQSAPRCEEAT-EPPAEKEKCRGGRRKRQEETHDQVMQGPVLPWDLPSFVNASPTSSTASLSDFVEDGSKDGQDCRLHYESGAEDDVHGGLVKESLFDSSLGDSDHSDTMADTRHQKRGEGQKAGMKRASGNLWANWFLREFFPECCQRYGSGDGFRDDLLDHPCQRKSRLQEAGSLPPRRPDAPDVLQGASGEVWKSLTVIGGMMREIAA-QTNDRSTKEESAQPRTETNRAVI----GAEGKGGGRGLGRSRAHVGHQARVEPRVVQARRA-ALASTCSSGDRSAPSANTGVDSRGLEVLRPNRVSDEVEDENRSQRRDGGRPTAATARPQVLVDDETGYTTSEEQGDRECST 826
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A835Z4C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C8_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.350e-38 Identity = 109/259 (42.08%), Postives = 139/259 (53.67%), Query Frame = 1
Query: 1 TPIVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVG--ERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEA 771
T IVT +VG++ VD+T NQ GS+AA+ LLEEAD + R+HL K S+LLLKAW E PR G + + GA+ GLTSY LS+MVL LFAL A L P +VL+ FF YS+FDW C+TL G P ++ G+ G GS + LV + ++ A ++ GA AA++ A F R CNIQDPLN NNLGHSV+ LR+L AL GRQ LEA
Sbjct: 167 TRIVTCIVGSLSVDITVNQIGSLAAALLLEEADRRV-RDHLIKRSVLLLKAWGLHEAPRYAGITQPVFGAKATGLTSYALSIMVLRLFALNACE--LRTPTEVLLAFFREYSDFDWDNLCVTLSGSKPLSASG----GSGVAGGGSDQHKFAALVSHLRSKI------------------------------------AQAKEGAVAAAAGAPPERFQHRFCNIQDPLNDTNNLGHSVSLPVLRSLISALAKGRQHLEA 382
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: E1ZPC3_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPC3_CHLVA) HSP 1 Score: 127 bits (320), Expect = 1.260e-26 Identity = 91/255 (35.69%), Postives = 125/255 (49.02%), Query Frame = 1
Query: 7 IVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQP-LVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLE 768
+V VV +VVVD++ + G + A LE AD I R HLFK SILLLKAW + E+ R+LGA G ++SY L V+VL++F L + L PLDVL RF V FDW R+CL L GP+P + H + T L +R VL +S +++++ EAA AP FP++ NI DPL NNLG SV+K + +++AL G + LE
Sbjct: 482 LVKCVVHDVVVDVSFDTVGGLCTVAFLEAADRRIGRQHLFKRSILLLKAWCYYES------RLLGAHHGLISSYALEVLVLYIFNLHHAE--LHTPLDVLRRFLAVLGSFDWERYCLALQGPLPIADLHKLHVDRTALVSSGTEPLLDADFMRGVLQHYSVQHLSQQQQQ--------------------------------EAAGMQLVAPRFPLKHLNIVDPLLPSNNLGRSVSKASYARVKKALALGNRMLE 696
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A2P6VGQ5_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGQ5_9CHLO) HSP 1 Score: 126 bits (316), Expect = 7.460e-26 Identity = 101/265 (38.11%), Postives = 133/265 (50.19%), Query Frame = 1
Query: 7 IVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFS------PTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAA----APHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEA 771
+V V +VVVD++ + G + A LE AD I R HLFK SILLLKAW + E+ R+LGA G ++SY L V+VL++F L AD L PLDVL RF V FDW R+CL L GP+P + H G T ++ VL ++S P XX A C SS ++ A A++ AA APHFP++ NI DPL NNLG SV+K + + +AL G + LEA
Sbjct: 143 LVKCVASDVVVDVSFDTVGGLCTVAFLEAADRRIGRQHLFKRSILLLKAWCYYES------RLLGAHHGLISSYALEVLVLYIFNLH-HAD-LHTPLDVLRRFLAVLGSFDWERYCLALQGPLPLAELHDPHVHISQMPPGVTPLLDDEFMQHVLQQYSVQQYLAPHGAXXXXXXXXXXXXXXXAGPAPGCALSSAFGSPPTAPAAADSDGGGAAMPLVAPHFPLKHLNIVDPLLLSNNLGRSVSKASFARVRKALALGSRTLEA 399
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A1Q3B3A6_CEPFO (NTP_transf_2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3B3A6_CEPFO) HSP 1 Score: 122 bits (307), Expect = 3.140e-25 Identity = 88/263 (33.46%), Postives = 123/263 (46.77%), Query Frame = 1
Query: 7 IVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEAWQLLPRAS 795
IV V N+ VD++ NQ ++ LE+ D LI ++HLFK S++L+KAW + E+ RIL A G +++Y L +VLH+ L S+ L PL V RF YS FDW +CL++ GPV +SV A+++G+ S Q ++ FS L ++ K HFPV+ NI DPL NNLG SV+K N + AL H Q+LE LLP S
Sbjct: 140 IVKCTVNNIAVDISFNQLAGLSTLCFLEKVDQLIGKDHLFKSSVILIKAWCYYES------RILCAHHGLISTYALETLVLHIINLFHSS--LSGPLAVFYRFLNYYSTFDWENYCLSVGGPVAISSVPEVLVSAENEGDELLFS--QEFLKYCRETFSVPLMAQETK-----------------------------------------VQHFPVKHLNIIDPLKDNNNLGRSVSKGNFHRIRCALSHSAQRLEEILLLPSES 351
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A6N2KXX8_SALVM (Uncharacterized protein n=2 Tax=Salix TaxID=40685 RepID=A0A6N2KXX8_SALVM) HSP 1 Score: 122 bits (307), Expect = 3.800e-25 Identity = 83/255 (32.55%), Postives = 120/255 (47.06%), Query Frame = 1
Query: 22 VGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEAWQLLP 786
V N+ VD++ NQ G + LE+ D LI R+HLFK S++L+KAW + E+ RILGA G +++Y L ++VL++ S+ L PL VL +F + YS FDW +C++++GPVP +S P +S S L R + L KE E + AP FP++ N+ DPL + NNLG SV K N + AL +G Q+L LP
Sbjct: 152 VKNIAVDISFNQMGGPSTLCFLEQVDQLIGRDHLFKRSVILIKAWCFYES------RILGAHHGLISAYALQILVLNIINNFHSS--LSGPLAVLYKFLDYYSTFDWDNYCVSINGPVPVSSF----PQMESIDNNGNESLLSQEFLRNCRDMFSFLMKEPEND----------------------------------------APEFPIKHLNVVDPLKSSNNLGRSVNKGNFHRIRGALSYGAQRLAEIIALP 354
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A5N5KHJ1_9ROSI (Uncharacterized protein n=2 Tax=Salix TaxID=40685 RepID=A0A5N5KHJ1_9ROSI) HSP 1 Score: 122 bits (307), Expect = 6.200e-25 Identity = 82/255 (32.16%), Postives = 120/255 (47.06%), Query Frame = 1
Query: 22 VGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQLEAWQLLP 786
V N+ VD++ NQ G + LE+ D LI R+HLFK S++L+KAW + E+ RILGA G +++Y L ++VL++ S+ L PL VL +F + YS FDW +C++++GP+P +S P +S S L R + L KE E + AP FP++ N+ DPL + NNLG SV K N + AL +G Q+L LP
Sbjct: 320 VKNIAVDISFNQMGGPSTLCFLEQVDQLIGRDHLFKRSVILIKAWCFYES------RILGAHHGLISAYALQILVLNIINNFHSS--LSGPLAVLYKFLDYYSTFDWDNYCVSINGPIPISSF----PQMESIDNNGNESLLSQEFLRNCRDMFSFLMKEPEND----------------------------------------APEFPIKHLNVVDPLKSSNNLGRSVNKGNFHRIRGALSYGAQRLAEIIALP 522
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: G7J6S6_MEDTR (Nucleotidyltransferase n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7J6S6_MEDTR) HSP 1 Score: 121 bits (304), Expect = 1.200e-24 Identity = 80/256 (31.25%), Postives = 127/256 (49.61%), Query Frame = 1
Query: 7 IVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSV---RATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQL 765
I+ +V V+D++ NQ + + L+E D LI RNH+FK S++L+KAW + E+ R+LG++ G ++Y L ++VL+LF L + V PL+VL RF E +S+FDWG +C++L GPVP +S+ A P D Q T S L + ++F + +K +E HF + NI DPL NNLGHS+++ N ++ A+ +G +Q+
Sbjct: 135 IIKCLVEKFVIDISFNQLSGLCSLCFLDEVDYLISRNHIFKRSVILIKAWCYHES------RLLGSKSGLFSTYALEILVLYLFNLYNNE--FVGPLEVLFRFLEFFSKFDWGNYCISLSGPVPLDSLPNMTADCPRKDRQDLLLTESFL------IASKFCYGWRNQKNREK-----------------------------------------HFVSKHINIIDPLQENNNLGHSISRGNFFRIKSAIAYGAEQM 335
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A2K1WQA0_POPTR (NTP_transf_2 domain-containing protein n=6 Tax=Populus TaxID=3689 RepID=A0A2K1WQA0_POPTR) HSP 1 Score: 120 bits (301), Expect = 2.040e-24 Identity = 82/248 (33.06%), Postives = 118/248 (47.58%), Query Frame = 1
Query: 22 VGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSVRATHPGADSQGEGSTNSRLQPLVRRVLAEFSPTLKKEKEKEXXRGKPGRRGRRASRCGRSSEGRGEASSQAGAEAASSAAAAPHFPVRDCNIQDPLNALNNLGHSVTKINLRALERALRHGRQQL 765
V N+ VD++ NQ +A LE+AD LI ++HLFK SI+L+KAW + E+ RILGA G +++Y L ++VL++ + S+ L PL VL +F + YS FDW +C++++GP+P +S P DS S + R E L KE E A FP++ NI DPL + NNLG SV K N + AL +G Q+L
Sbjct: 143 VKNISVDISFNQMAGPSALCFLEQADQLIGQDHLFKRSIILIKAWCFYES------RILGAHHGLISTYALQILVLNIINVFHSS--LPDPLAVLYKFLDYYSAFDWDNYCVSINGPIPISSF----PQTDSTHNNGNESLISQEFLRNFREKFAFLMKELEN----------------------------------------GAHEFPIKHLNIVDPLKSSNNLGRSVNKGNFHRIRGALSYGAQRL 338
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Match: A0A445K8R4_GLYSO (NTP_transf_2 domain-containing protein (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445K8R4_GLYSO) HSP 1 Score: 111 bits (277), Expect = 3.690e-24 Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 7 IVTMVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCETPRLVGERILGAQKGGLTSYGLSVMVLHLFALRASADILVHPLDVLVRFFEVYSEFDWGRHCLTLDGPVPFNSV 390
I+ ++ N VVD++ NQ + LEE DNLI++ HLFK SI+L+KAW++ E+ RILG+Q G L++YGL +++++LF + + L PL+VL +F +S+FDW ++C++L GPVP S+
Sbjct: 66 IIKCLIENFVVDISFNQIDGLGTLCFLEEVDNLIRKEHLFKESIILIKAWSYYES------RILGSQHGLLSTYGLEILIIYLFNIYSHT--LAGPLEVLFQFLNFFSKFDWNKYCISLRGPVPIRSL 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17659.4986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17659.4986.1 >prot_L-elsbetiae_contig17659.4986.1 ID=prot_L-elsbetiae_contig17659.4986.1|Name=mRNA_L-elsbetiae_contig17659.4986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=850bp MVVGNVVVDLTENQWGSVAASALLEEADNLIQRNHLFKHSILLLKAWAWCback to top mRNA from alignment at L-elsbetiae_contig17659:90..3322- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17659.4986.1 ID=mRNA_L-elsbetiae_contig17659.4986.1|Name=mRNA_L-elsbetiae_contig17659.4986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3233bp|location=Sequence derived from alignment at L-elsbetiae_contig17659:90..3322- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17659:90..3322- >mRNA_L-elsbetiae_contig17659.4986.1 ID=mRNA_L-elsbetiae_contig17659.4986.1|Name=mRNA_L-elsbetiae_contig17659.4986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5100bp|location=Sequence derived from alignment at L-elsbetiae_contig17659:90..3322- (Laminarionema elsbetiae ELsaHSoW15)back to top |