mRNA_L-elsbetiae_contig17218.4793.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 187 bits (475), Expect = 4.580e-54 Identity = 120/267 (44.94%), Postives = 153/267 (57.30%), Query Frame = 2 Query: 158 CSACVG*RFAVRAIVRLGDGLRLPRSRVETRIRQFASEHGVSETFPTLQPAISGA--LSLCKCPECLLDLFNKQEKRDMKQLRLGSTRKRKQVV------TRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYL-SHGVQRPDWVVTSPPIK----FVKAALAVATNGVALKLPLSFLEPCGDRGGVAPE*CTFGLPFLTLLVRQPSEKTNYRHH 919 CSAC+ G R R+R +R F E G+++ FP Q +G L+LCK CLL+L+ KQE + R RK KQ+ + PEPV H KRR LDR+CT PEA + L V I G +LDMCGGP DAVA STC V+ ND+ R +A TN DAS+ +F ++ ++ ++PDWVVTSPP K FVKAALAVAT GVALKLPLSFLEPC DRGG + P + + +R+ K + HH Sbjct: 25 CSACL----------EWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQE---WARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVD----NPPAVCIFLRRA--KYTHAHH 272
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 182 bits (462), Expect = 3.780e-53 Identity = 105/196 (53.57%), Postives = 132/196 (67.35%), Query Frame = 2 Query: 290 FPTLQPAISGA--LSLCKCPECLLDLFNKQEKRDMK---QLRLGSTRKRKQVVTRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAA-----DTNFDASVPTFAKDYL-SHGVQRPDWVVTSPPIK----FVKAALAVATNGVALKLPLSFLEPCGDRGG 832 FP+L SG L LC P+CLL L+ KQ + K +LR + T +PEP H+KRR LDR+CTSPEA +AL+ V+++G +LDMCGGPGDA+AT LG+TC VV NDI R + DTN DAS+ +FA D+L + QRPDWV+TSPP K +VK+AL++A GVALKLPLSFLEPC DRGG Sbjct: 13 FPSLNAEGSGMYRLVLCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGG 208
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 162 bits (409), Expect = 4.030e-45 Identity = 99/195 (50.77%), Postives = 123/195 (63.08%), Query Frame = 2 Query: 278 VSETFPTLQ---PAISGALSLCKCPECLLDLFNKQEKRDMKQLRLGSTRKRKQVV--TRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPIK----FVKAALAVATNGVALKLPLSFLEPCGDRGG 832 + + FP L+ P+I L LCK CLL+LF ++RD R + R+ K+ T PEPV +KRR +DR+CTSP +AL+ V I G +LDMCGG DAVA L TC V+ ND+ R + TN DAS +F D+L+ H Q+PDW+VTSPP K FVKAAL VA GVALKLPLSFLEPC DR G Sbjct: 1 MGDKFPGLKCGDPSID-KLVLCKRAGCLLELFVLNQQRDS---RAPTKRRAKRGPKWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAG 191
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 162 bits (409), Expect = 4.030e-45 Identity = 97/204 (47.55%), Postives = 123/204 (60.29%), Query Frame = 2 Query: 230 RSRVETRIRQFASEHGVSETFPTLQPAISGA--LSLCKCPECLLDLFNKQEKRDMKQLRLGSTRKRKQVVT--------RVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLSHGV-QRPDWVVTSPPIK----FVKAALAVATNGVALKLP 796 R R +++R F E G++ FP L GA L+LCK CLL L+ K E+R K+ R R RK T VPEP H+KRR LDR+CTSPEA +AL+ V I G +LD+CGGP DAVAT LG TC V+ ND+ ADTN DAS+ +F D+ + +RPDWVVTSP K FVKAA+++AT GV + P Sbjct: 2 RPRTSSQVRAFVDEIGIANQFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKE-RSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAP 204
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.130e-42 Identity = 103/224 (45.98%), Postives = 130/224 (58.04%), Query Frame = 2 Query: 215 GLRLPRSRVETRIRQFASEHGVSETFPTLQPAISGALSL--CKCPECLLDLFNKQEKRDMKQLRLGSTRKRKQ-------VVTRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKR------SAADTNFDASVPTFAKDYLSHGVQR-PDWVVTSPP----IKFVKAALAVATNGVALKLPLSFLEPCGDR 826 G R R R + +R F G++E FP + P G SL CK EC+L KQ + M RK+++ T PEP +H+KRR LDR+CTS A +AL+ V++ G +LDMCGGP DAVA L TC VV ND+ R A DT+ DAS TFA ++L+ G Q+ P+ VV SPP +KFVKAAL VA +GVALK LSFLEPC DR Sbjct: 24 GYRQLRPRTMSMLRAFVRNAGLAEKFPGVMPLGVGIDSLVRCKRAECVL----KQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDR 243
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 148 bits (374), Expect = 3.060e-40 Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 2 Query: 443 PEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPP----IKFVKAALAVATNGVALKLPLSFLEPCGDRGG 832 PEP H++RR LDR+CTSPEA A + VDI G +LDMCGGP DAVAT L STC ++ ND+ ADTN DAS+ +F +D+L+ + +RP+WV TSPP + FVKAA+++AT GV K+ + FLEPC D GG Sbjct: 16 PEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGG 150
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5K266_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K266_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.360e-30 Identity = 76/174 (43.68%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 251 IRQFASEHGVSETFPTLQPAISGALSLCKCPECLLDLFNKQ-----EKRDMKQLRLGSTRKRKQVVTRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKR------SAADTNFDASVPTFAKDYLSHGVQ-RPDWVVTSPP 736 +R F E G++E FP L L LC+ CLL+L++K+ ++R ++L+L + K T PEPV ++RR LDR CTS A + L+ VDI G +LDMCGGP DAVA LG+TC ++ NDI R A D + DAS TF +L + +Q RPDWVV SPP Sbjct: 2 LRAFMEETGITENFPGLAVLSITPLVLCQRAGCLLNLYDKRMRVLSKERIARKLKLVPAARTKW--TGSPEPVRQLQRRLLDRCCTSDAAVEVLLRAVDISGRVLDMCGGPCDAVARLLGATCELITNDISGRLSPGSKKAPDMHLDASATTFCAAFLENSIQQRPDWVVKSPP 173
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 114 bits (286), Expect = 7.710e-28 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 554 MCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPP----IKFVKAALAVATNGVALKLPLSFLEPCGDRGG 832 MCGGP DAVAT L STC ++ ND+ ADTN +AS+ F +D+L+ + +RP+WVVTSPP + FVKAA+++AT GVA K+P+ FLEPC DRGG Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGG 98
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: D7G7B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B0_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.430e-27 Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 2 Query: 554 MCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPP----IKFVKAALAVATNGVALKLPLSFLEPCGDRGG 832 MCGGP DAVAT L STC ++ ND+ ADTN DAS+ F +++L+ + +RP+WVV SPP + FVKAA+++AT GVA K+P+ FLEPC DRGG Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLELFPENFLAAYSGKRPEWVVISPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGG 98
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Match: A0A6H5K8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H6_9PHAE) HSP 1 Score: 110 bits (275), Expect = 4.260e-25 Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 440 VPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIKGLLLDMCGGPGDAVATTLGSTCSVVANDIRKRSAADTNFDASVPTFAKDYLSH-GVQRPDWVVTSPP 736 +PEP H+KRR LDR+CTSPEA +AL+ V I G +LDMCGGP DAVAT L TC V D+ ADTN DAS+ + D+++ +RPDWVVTSPP Sbjct: 152 LPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDMCGGPTDAVATRLRPTCEVFTKDVSSGRPADTNLDASLESLPDDFVAACSGKRPDWVVTSPP 251 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17218.4793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17218.4793.1 >prot_L-elsbetiae_contig17218.4793.1 ID=prot_L-elsbetiae_contig17218.4793.1|Name=mRNA_L-elsbetiae_contig17218.4793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp MKQLRLGSTRKRKQVVTRVPEPVLHMKRRPLDRHCTSPEAGKALIAKVDIback to top mRNA from alignment at L-elsbetiae_contig17218:584..2151+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17218.4793.1 ID=mRNA_L-elsbetiae_contig17218.4793.1|Name=mRNA_L-elsbetiae_contig17218.4793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1568bp|location=Sequence derived from alignment at L-elsbetiae_contig17218:584..2151+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17218:584..2151+ >mRNA_L-elsbetiae_contig17218.4793.1 ID=mRNA_L-elsbetiae_contig17218.4793.1|Name=mRNA_L-elsbetiae_contig17218.4793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig17218:584..2151+ (Laminarionema elsbetiae ELsaHSoW15)back to top |