mRNA_L-elsbetiae_contig17081.4732.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: D7FVD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD7_ECTSI) HSP 1 Score: 312 bits (800), Expect = 2.530e-91 Identity = 158/222 (71.17%), Postives = 168/222 (75.68%), Query Frame = 1 Query: 19 FCGIVGFVLAAVWEVAGRPGGPSWQGSGVFPQRGAHGRHEDRAQPPVWVVVGGSLTLGDVLASRRAVAKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAGGAQWEEMAVILREDGPKR 684 FCG+VG VLAA G SWQG R H RAQPPVWVV G SLTLGDVL SR + N G VQWF+ G LP Q R FLTIS S EDEGTYACF VEESGR+GS LWEEATVRISEPPLVESQLQTQRLARGEMLAI+ATASGVP PEYQWRRNG+PIPGA RPMLV++ V+EADMGTYTCDV+NVAG QWEEMAVILRED KR Sbjct: 1096 FCGVVGLVLAAAGGAGRGAGDASWQGGDRLTPRVVHEGQTKRAQPPVWVVAGRSLTLGDVLTSRDSAFMANDTGGVQWFRGGNVLPGQTRPFLTISEVSLEDEGTYACFTVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR 1317
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A7C4LT62_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7C4LT62_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 2.710e-11 Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 178 SLTLGDVLASRRAVAKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAG 630 ++ G+V++ AVA G +W KDG + + L I GA ED G Y +G V S+ AT+ + PP++ + Q+Q + G +A A G YQWRRNG I GAN P S D GTYT V N G Sbjct: 414 TVPQGNVVSFSVAVA-GTAPFSYRWLKDGAAVSGATGNPLVIGGAQPEDAGAYVVVVTNSAGMVTSQT----ATLNVLIPPVILAHPQSQTVVAGSSVAFSVVAQGATN--YQWRRNGNNIAGANSPTYSLNSAQTNDAGTYTVAVSNGGG 557
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A2V6F844_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6F844_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 4.880e-11 Identity = 48/153 (31.37%), Postives = 68/153 (44.44%), Query Frame = 1 Query: 220 AKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAGGAQWEEMAVILREDGP 678 A G QW+ + + + TIS A + D G Y +G V S AT+ + PP++ +Q Q+ + G A A+G+P P YQW+ NG+ IPGA R +V AD G YT N AG A +L + P Sbjct: 403 ANGTAPFSYQWYCNNSSIAGASGASYTISAAQAGDAGDYKVRVSNSAGIVDSVV----ATLAVQSPPVITAQPQSLTVNVGASATFTAAATGIPDPAYQWKFNGVNIPGATSSSYTRDNVQPADAGNYTVVAVNSAGAVT--SQAAVLTVNQP 549
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A832MI82_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832MI82_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.320e-10 Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 1 Query: 235 AGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAGGAQWEEMAVILR 666 A QW +DG + + L ++ + D G Y+ +G + SR A + + PP++ +Q Q+Q +A SGVP YQWR NG+ +PGA LV +V A G Y +V N AG A +++R Sbjct: 908 ADSYQWLRDGVAIEGANQPTLGLTNVQTTDSGLYSVVLSNAAGVLTSRV----AALIVQTPPIIVTQPQSQTAVAFTTVAFGVDVSGVPPYHYQWRFNGVDLPGATNATLVLSNVQSAQAGNYQVEVSNTAGAATSAVATLVVR 1047
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A3E1E7X5_9BACT (Immunoglobulin domain-containing protein/Autotransporter-associated beta strand protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1E7X5_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.480e-10 Identity = 44/139 (31.65%), Postives = 63/139 (45.32%), Query Frame = 1 Query: 214 AVAKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAG 630 A A+G G QW +DG P+P +S LT+ + D G Y G L A + + PP++ ++ +L G A+G + YQWRRNG+ IPGA R +V D G++ C V V G Sbjct: 3348 AAAEGTGPFSYQWLRDGIPVPGATKSTLTLPSVVAADSGMYQLLVRNVVSTTG--VLSNAAVLTVEAPPVILTEPADVKLLSGGTAVFSVGATGSGSLTYQWRRNGIEIPGATASAYTRQAVNAFDSGSFDCLVTKVIG 3484
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A7C3KZU9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3KZU9_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 5.090e-10 Identity = 48/169 (28.40%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 172 GGSLTLGDVLASRRAVAKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAGGAQWEEMAVILREDGP 678 GG+ G V G G QW +G+ + + T S ++ GTY C+ V + + ++ AT+ ++ P + +Q G+ + A+G P P YQWR+ G+PIPGA SVT+AD G Y C V N G ++ A+++ P Sbjct: 215 GGATICGGSQTFCAGVGSGTGPFSYQWQLNGQDI-----AGATGSCYNATQPGTYRCY-VWNACSAATPSVTPSATLTVNAAPQITTQPTGATRCVGQSWTVCVGATGTPAPTYQWRKFGVPIPGATSSCYTILSVTQADAGDYDCVVTNTCG-SETSSPALLVVPSSP 376
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: UPI001C5356DD (hemicentin-2 n=1 Tax=Dipodomys spectabilis TaxID=105255 RepID=UPI001C5356DD) HSP 1 Score: 73.6 bits (179), Expect = 5.970e-10 Identity = 59/184 (32.07%), Postives = 82/184 (44.57%), Query Frame = 1 Query: 169 VGGSLTLGDVLASRRAVAKGNGAGEVQWFKDGRPLPQQIRSF------LTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANR-PMLVRYSV----TEA-DMGTYTCDVFNVAGGAQWEEMAVILREDGPKR 684 VGGS+ L +G+ A ++QW KDG PLP F LTI A ED G Y C A E G V + T+ + P+ + + Q + GE + + A+G P P +W R G P+ R ML S+ T+A D GTY C N+ G A + + V+ E R Sbjct: 4223 VGGSIRLD-------CEVRGDPAPDIQWTKDGLPLPSSRLRFGLQNGSLTIRRAELEDAGQYQCLAENEVGSVK-----KVLTLVLQSAPVFQMEPQDVAVRSGEDVVLQCQATGEPAPTIEWLRAGRPLQAGPRLQMLSDGSLWLERTQAGDAGTYECVAHNLLGSATAQVLLVVRGEPRGSR 4394
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A2D5WIW7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5WIW7_9BACT) HSP 1 Score: 72.4 bits (176), Expect = 1.330e-9 Identity = 43/139 (30.94%), Postives = 64/139 (46.04%), Query Frame = 1 Query: 247 QWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFNVAGGAQWEEMAVIL 663 QW +G P+ + + L I ++ D GTY A S V S + A + I PP++ Q+ A GE + + TA G P YQW+R G+ IPG L + D G YT ++ N AG + + V + Sbjct: 1956 QWNLNGEPVADETAAKLVIDEVAALDGGTYTVTASNASNSVES----DGAELTIQTPPIITKIAGDQQAAVGETVTLWVTAVGTPPLSYQWKREGVVIPGGTGDSLELSELVSLDAGQYTVEISNSAGSTVSDPIEVSV 2090
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: UPI001CEDF7B9 (immunoglobulin domain-containing protein n=1 Tax=Opitutus sp. WL0086 TaxID=2866162 RepID=UPI001CEDF7B9) HSP 1 Score: 72.0 bits (175), Expect = 1.520e-9 Identity = 56/163 (34.36%), Postives = 72/163 (44.17%), Query Frame = 1 Query: 136 EDRAQPP-VWVVVGGSLTLGDVLASRRAVAKGNGAGEVQWFKDGRPLPQQIRSFLTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRYSVTEADMGTYTCDVFN 621 E +QP V VVG TL V A + A QW KDG + + L S + D G Y G V S AT+ +S PP + +Q ++ + GE + TASG+P+P YQWRRNG I GA L T AD G Y + N Sbjct: 736 EITSQPASVSAVVGAGATL-SVSADSQPSAS------FQWRKDGISIVDATGASLAFSSLTLADAGDYDVLVTNALGSVISAT----ATITVSAPPTISAQPISETVNVGEPTTLSVTASGLPSPSYQWRRNGSNIAGATSATLDLGLATLADAGDYDVVISN 887
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Match: A0A8B7XZA5_ACAPL (hemicentin-1-like isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XZA5_ACAPL) HSP 1 Score: 72.0 bits (175), Expect = 1.810e-9 Identity = 44/146 (30.14%), Postives = 64/146 (43.84%), Query Frame = 1 Query: 241 EVQWFKDGRPLPQQIRSF------LTISGASSEDEGTYACFAVEESGRVGSRALWEEATVRISEPPLVESQLQTQRLARGEMLAIIATASGVPTPEYQWRRNGMPIPGANRPMLVRY--------SVTEADMGTYTCDVFNVAGGA 636 E W K+GR LP +R L +S D GTY C A +G + ++ +++ PP + L + G + + G+PTP+ QW + G+P+ N P + R VTE D G Y C FN AG A Sbjct: 1407 EFTWLKNGRRLPGDLRHVVRPDGTLALSSLRLIDSGTYTCIASNVAG--STNIIYR---LQVISPPSIAPGLTQLTVESGRTIELSCEVDGIPTPQVQWHKQGIPLDVDNNPRINRLVAGSLRIQGVTEEDTGEYECYAFNAAGSA 1547 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17081.4732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17081.4732.1 >prot_L-elsbetiae_contig17081.4732.1 ID=prot_L-elsbetiae_contig17081.4732.1|Name=mRNA_L-elsbetiae_contig17081.4732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp LTRRLLFCGIVGFVLAAVWEVAGRPGGPSWQGSGVFPQRGAHGRHEDRAQback to top mRNA from alignment at L-elsbetiae_contig17081:1158..3400- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17081.4732.1 ID=mRNA_L-elsbetiae_contig17081.4732.1|Name=mRNA_L-elsbetiae_contig17081.4732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2243bp|location=Sequence derived from alignment at L-elsbetiae_contig17081:1158..3400- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17081:1158..3400- >mRNA_L-elsbetiae_contig17081.4732.1 ID=mRNA_L-elsbetiae_contig17081.4732.1|Name=mRNA_L-elsbetiae_contig17081.4732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig17081:1158..3400- (Laminarionema elsbetiae ELsaHSoW15)back to top |