mRNA_L-elsbetiae_contig1695.4663.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1695.4663.1
Unique NamemRNA_L-elsbetiae_contig1695.4663.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: D7FRS8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS8_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.150e-52
Identity = 106/186 (56.99%), Postives = 137/186 (73.66%), Query Frame = 1 
Query:    1 VSGEGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRS-GYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAARVETVIRETTLEASRDCKASDLTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVT 555
            +SGE ++Q LFSV G +P GALCA++GP+ SGKS LL +LSGRP   +GR EG   F GR + + +  ++  R S G++R+GH G++  L+ F+N++ AAMLRTPGSLEDQ  +VETVI +T L+  RD +AS L AG+KRRLSLAVELLSDRR+LLLD  F GL   E++ LM VL RLSR KVT
Sbjct:    1 MSGEFQQQ-LFSVDGSVPEGALCAIIGPTDSGKSALLALLSGRP--CMGRVEGRALFEGRLIEEQQMPSNTDRHSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTKVETVIGDTALDECRDTRASFLAAGEKRRLSLAVELLSDRRILLLDGVFSGLDTNESMVLMEVLKRLSRNKVT 183
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BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: D7G376_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 8.460e-44
Identity = 101/223 (45.29%), Postives = 138/223 (61.88%), Query Frame = 1 
Query:   16 EKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAARVETVIRETTLEASRDCKASDLTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCGCADQALQETARY 684
            EKQ+L ++ G +P G+LCALMGPSGSGKSTLLD+L+GR   ++GR  G + F G+ + + + S  Y+ +SGY+R                                      I+ T+LE S + KA  L+ G KRRLSLA+ELL DRRVL LD+P  GL A  +L+LM +L RLS K VT+VV++ +PRPE+W LF+H++LLK GR V+CG AD+AL    R+
Sbjct:  489 EKQLLHNMDGEVPKGSLCALMGPSGSGKSTLLDLLTGRK--AIGRCSGELMFNGKSIANQKGS--YISKSGYMR-------------------------------------AIKLTSLEGSINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK-VTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALSSITRW 669
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A388LTX5_CHABU (ABC transporter domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LTX5_CHABU)

HSP 1 Score: 130 bits (326), Expect = 2.010e-28
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 1 
Query:   16 EKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPG--SLEDQAARVETVIRETTLEASRDC-----KASDLTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCGCADQAL 666
            E Q+L  V G   AG L A+MGPSGSGKSTLL++L GR   S G  EG++  +G P++  RA       + ++++   G    LT   +L  +AMLR P   SL  +  RVE +I E  L +  D          L+ GQKRRLS+A ELL+   V+LLD+P  GL +A ALD++ +L RL+R    + ++V +PR EI+++F   +L+  G+AVF G   +A+
Sbjct:  621 EVQILHDVSGWATAGQLTAIMGPSGSGKSTLLELLIGR--RSSGVVEGSLMISGYPLSQRRAWLK--ANTTFLQQEDVGLPQ-LTVRQSLTYSAMLRLPRKMSLAAKLIRVEQIIEEVGLGSCADTIFGGPNLPGLSGGQKRRLSIATELLTLPSVILLDEPTSGLDSASALDIIRLLSRLARAGRVIALAVHQPRQEIFQMFDRLILVAHGQAVFSGTPTEAM 839
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A2D4CKG3_PYTIN (ABC transporter-like protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKG3_PYTIN)

HSP 1 Score: 127 bits (319), Expect = 6.530e-28
Identity = 85/221 (38.46%), Postives = 123/221 (55.66%), Query Frame = 1 
Query:   19 KQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAARVETVIRETTLEASRDCKASD-----LTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCGCADQAL 666
            K +L +V G   AG L A+MGPSG GK+TLLD+L+ R  +  G   G V   G    D+R +  + R + Y+ +  A  +G  T  + LV AA L       D+A+ V+ V+RE  L +       D     ++ GQKRRLS+A+ELLS+  VLLLD+P  GL AA    L+ +L  L+R+  TVV ++ +P   ++ +F   VLL +GR  FCG   + L
Sbjct:   21 KFILHNVTGRCGAGELTAVMGPSGCGKTTLLDILADRVSSKSGELSGRVELNG----DHRDARVFRRVARYVAQEDA-LLGCFTVRETLVMAAQLTMAAPASDRASFVDAVLREVGLTSCEHTYVGDVFHKGISGGQKRRLSIAIELLSNPSVLLLDEPTSGLDAAATFRLLQLLQHLARQGRTVVCTIHQPSSRVFEMFDGVVLLAAGRTAFCGPRSETL 236
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BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A197K311_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K311_9FUNG)

HSP 1 Score: 124 bits (311), Expect = 8.970e-27
Identity = 78/223 (34.98%), Postives = 131/223 (58.74%), Query Frame = 1 
Query:   16 EKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSL--EDQAARVETVIRETTLEASRDCKASD-----LTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCGCADQA 663
            ++ +L +V      G + A+MGPSGSGK+TLLD+L+ R   ++G+ +G +     PV   +  +   R  GY+ +    F+  LT  + L  AA +R P ++  +D+ ARV+ V+ E  L   ++ K        ++ G+KRR+++ +ELLS   VLLLD+P  GL++ +AL++ N +  L+RK  TV+++V +PR +I+ LF   +LL  G+ V+ G A  A
Sbjct:   64 QRAILSNVDVKATPGRVLAIMGPSGSGKTTLLDLLADRQARNIGKIQGDILLNDVPV--KQYGSIRKRLVGYVTQ-EDDFIETLTVLETLTFAAKMRLPRAMSTKDKLARVDAVMEELNLTHIKNTKVGGAVIRGISGGEKRRVTIGIELLSSPSVLLLDEPTSGLSSTDALNVANAIKELARKGRTVILTVHQPRSDIYELFDDLLLLSKGKVVYFGKAQDA 283
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A3F2RIX0_9STRA (ABC transporter domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIX0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.360e-26
Identity = 84/222 (37.84%), Postives = 125/222 (56.31%), Query Frame = 1 
Query:   10 EGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAG--RPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAAR--VETVIRETTLEASRDCKASDL-----TAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCG 648
            +G+K +L +V G    G L A+MGPSGSGK+TLLD+L+   R S G  +G +   G  R V   RA ASYV +   +       +G  TA + L  AA L  P S+     R  V+TVI E  L A    +  D+     + GQKRRLS+A+ELLSD  +LLLD+P  GL +A    +M  + RL ++  T++ ++ +P   ++ LF++  +L +G+ V+ G
Sbjct:   64 DGKKTILNNVTGRCAPGELTAIMGPSGSGKTTLLDILA--DRISSGTVKGGICVNGKTRDVKTFRAVASYVAQEDSL-------LGSFTALETLEMAARLSLPNSVTHTDIRNHVQTVIDEMGLRACEHARVGDIFRKSISGGQKRRLSIAIELLSDPAILLLDEPTSGLDSASTFKVMQFVSRLCKEGRTIICTIHQPSSLVYDLFTNVAILTAGQTVYFG 276
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A6A3DNJ4_9STRA (ABC transporter domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DNJ4_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.440e-26
Identity = 81/222 (36.49%), Postives = 127/222 (57.21%), Query Frame = 1 
Query:   10 EGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAG--RPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSL--EDQAARVETVIRETTLEASRDCKASDL-----TAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCG 648
            +G+K +L +V G    G L A+MGPSGSGK+TLLD+L+   R S G   G ++  G  R +T  RA +SYV +   +       +G  T  + L  AA L  P S+   +   RV+TVI E  L         D+     + GQKRRLS+A+ELLS+  +LLLD+P  GL +A   ++M  + RL ++ +TV+ ++ +P   ++ +F++ V+L +G+ V+ G
Sbjct:   46 DGKKTILTNVTGRCAPGELTAVMGPSGSGKTTLLDILA--DRISSGTIRGDIALNGETRNLTTFRAVSSYVAQEDSL-------LGTFTVLETLEMAAKLSLPNSVTHREVVERVQTVIDEMGLRVCEHTMVGDIFRKGISGGQKRRLSIAIELLSEPSILLLDEPTSGLDSASTYNVMKFVSRLCKENMTVICTIHQPSSLVYNMFTNVVILTAGQTVYFG 258
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A8K1CLJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLJ7_PYTOL)

HSP 1 Score: 122 bits (307), Expect = 2.610e-26
Identity = 83/222 (37.39%), Postives = 123/222 (55.41%), Query Frame = 1 
Query:   10 EGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAG--RPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQ--AARVETVIRETTLEASRDCKASD-----LTAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCG 648
            +G K +L +V G    G L A+MGPSGSGK+TLLDVL+   R S G  +GT+   G  R     RA  SYV +   +       +G  T  + L  AA L  P S+++   A RV  VI E  L +       D     L+ GQKRRLS+A+ELLS+  +LLLD+P  GL ++   ++M  +  L ++K TV+ ++ +P   ++ +F+  +LL  G+ V+CG
Sbjct:   60 DGRKTILENVSGRCAPGDLMAVMGPSGSGKTTLLDVLA--DRISSGSVDGTIELNGSHRQAKPFRAVTSYVAQEDSL-------LGSFTVVETLQMAAKLSLPRSVDNTMIAERVAAVIDEMGLRSCEHTLIGDIFRKGLSGGQKRRLSIAIELLSNPSILLLDEPTSGLDSSSTYNVMKFITNLCQEKKTVICTIHQPSSLVYEMFTTIMLLSGGKTVYCG 272
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A2D4BY00_PYTIN (ABC transporter-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY00_PYTIN)

HSP 1 Score: 122 bits (307), Expect = 2.860e-26
Identity = 78/230 (33.91%), Postives = 128/230 (55.65%), Query Frame = 1 
Query:   10 EGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAA--RVETVIRETTLEASRDCKASDL-----TAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCGCADQALQETA 678
            +G K +L  V G    G L A+MGPSGSGK+TLLD+L+ R   S G  +GT+   G    ++R S  +   + Y+ +  +  +G  T  + L  AA +  P S+++     RV+ VI E  L    +    D+     + GQKRRLS+A+ELLSD  +LLLD+P  GL ++   ++M  +  L +++ TV+ ++ +P   ++ +F+  ++L +G  V+CG    AL+  A
Sbjct:   79 DGRKAILRDVSGRCAPGELLAVMGPSGSGKTTLLDILADRVSPSSGTIDGTIEVNG----EHRNSKFFRSVTSYVAQEDS-LLGSFTVRETLTMAAKISLPSSIDEATIKHRVDAVIDEMGLRGCENTIVGDIFRKGISGGQKRRLSIAMELLSDPSILLLDEPTSGLDSSSTYNVMKYITNLCQERKTVICTIHQPSSLVYDMFTSVLILSAGETVYCGPRRDALRHFA 303
[Close]
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Match: A0A3R7GD35_9STRA (ABC transporter domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GD35_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.220e-26
Identity = 84/222 (37.84%), Postives = 125/222 (56.31%), Query Frame = 1 
Query:   10 EGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGRAEGTVSFAG--RPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAMLRTPGSLEDQAAR--VETVIRETTLEASRDCKASDL-----TAGQKRRLSLAVELLSDRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRLFSHSVLLKSGRAVFCG 648
            +G+K +L +V G    G L A+MGPSGSGK+TLLD+L+   R S G  +G +   G  R V   RA ASYV +   +       +G  TA + L  AA L  P S+     R  V+TVI E  L A    +  D+     + GQKRRLS+A+ELLSD  +LLLD+P  GL +A    +M  + RL ++  T++ ++ +P   ++ LF++  +L +G+ V+ G
Sbjct:  268 DGKKTILNNVTGRCAPGELTAIMGPSGSGKTTLLDILA--DRISSGTVKGGICVNGKTRDVKTFRAVASYVAQEDSL-------LGSFTALETLEMAARLSLPNSVTHTDIRNHVQTVIDEMGLRACEHARVGDIFRKSISGGQKRRLSIAIELLSDPAILLLDEPTSGLDSASTFKVMQFVSRLCKEGRTIICTIHQPSSLVYDLFTNVAILTAGQTVYFG 480
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1695.4663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRS8_ECTSI3.150e-5256.99ABC transporter domain-containing protein n=1 Tax=... [more]
D7G376_ECTSI8.460e-4445.29ABC transporter domain-containing protein n=1 Tax=... [more]
A0A388LTX5_CHABU2.010e-2840.18ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2D4CKG3_PYTIN6.530e-2838.46ABC transporter-like protein (Fragment) n=1 Tax=Py... [more]
A0A197K311_9FUNG8.970e-2734.98p-loop containing nucleoside triphosphate hydrolas... [more]
A0A3F2RIX0_9STRA2.360e-2637.84ABC transporter domain-containing protein n=3 Tax=... [more]
A0A6A3DNJ4_9STRA2.440e-2636.49ABC transporter domain-containing protein n=3 Tax=... [more]
A0A8K1CLJ7_PYTOL2.610e-2637.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BY00_PYTIN2.860e-2633.91ABC transporter-like protein n=1 Tax=Pythium insid... [more]
A0A3R7GD35_9STRA4.220e-2637.84ABC transporter domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1695contigL-elsbetiae_contig1695:16062..22378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.6
Seed ortholog evalue1.4e-44
Seed eggNOG ortholog2880.D7FRS8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-25_000240.1
Exons6
Model size1420
Cds size1419
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1695.4663.1prot_L-elsbetiae_contig1695.4663.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1695 16063..22378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.7167068-CDS-L-elsbetiae_contig1695:16062..168011622815704.7167068-CDS-L-elsbetiae_contig1695:16062..16801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 16063..16801 -
1691683048.8009202-CDS-L-elsbetiae_contig1695:16062..168011691683048.8009202-CDS-L-elsbetiae_contig1695:16062..16801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 16063..16801 -
1622815704.7279513-CDS-L-elsbetiae_contig1695:18128..182591622815704.7279513-CDS-L-elsbetiae_contig1695:18128..18259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 18129..18259 -
1691683048.816744-CDS-L-elsbetiae_contig1695:18128..182591691683048.816744-CDS-L-elsbetiae_contig1695:18128..18259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 18129..18259 -
1622815704.7382867-CDS-L-elsbetiae_contig1695:20141..203431622815704.7382867-CDS-L-elsbetiae_contig1695:20141..20343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 20142..20343 -
1691683048.8310485-CDS-L-elsbetiae_contig1695:20141..203431691683048.8310485-CDS-L-elsbetiae_contig1695:20141..20343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 20142..20343 -
1622815704.7476647-CDS-L-elsbetiae_contig1695:21059..212021622815704.7476647-CDS-L-elsbetiae_contig1695:21059..21202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 21060..21202 -
1691683048.841059-CDS-L-elsbetiae_contig1695:21059..212021691683048.841059-CDS-L-elsbetiae_contig1695:21059..21202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 21060..21202 -
1622815704.7598293-CDS-L-elsbetiae_contig1695:21791..219011622815704.7598293-CDS-L-elsbetiae_contig1695:21791..21901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 21792..21901 -
1691683048.851218-CDS-L-elsbetiae_contig1695:21791..219011691683048.851218-CDS-L-elsbetiae_contig1695:21791..21901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 21792..21901 -
1622815704.7707589-CDS-L-elsbetiae_contig1695:22284..223781622815704.7707589-CDS-L-elsbetiae_contig1695:22284..22378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 22285..22378 -
1691683048.861141-CDS-L-elsbetiae_contig1695:22284..223781691683048.861141-CDS-L-elsbetiae_contig1695:22284..22378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1695 22285..22378 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1695.4663.1

>prot_L-elsbetiae_contig1695.4663.1 ID=prot_L-elsbetiae_contig1695.4663.1|Name=mRNA_L-elsbetiae_contig1695.4663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
VSGEGEKQVLFSVGGGIPAGALCALMGPSGSGKSTLLDVLSGRPRTSVGR
AEGTVSFAGRPVTDNRASASYVRRSGYIRRGHAGFVGGLTAFDNLVAAAM
LRTPGSLEDQAARVETVIRETTLEASRDCKASDLTAGQKRRLSLAVELLS
DRRVLLLDQPFLGLAAAEALDLMNVLCRLSRKKVTVVVSVDRPRPEIWRL
FSHSVLLKSGRAVFCGCADQALQETARYLPESAAAAAAVAAESILDMPQR
QAERRSRALSASEATETDMMSSDMASTDMASMDMASTVASVASGAGCRLH
RGLDASQEEGGGGSGGGGGGGGGGSFGYLSPATYSPSSHHAYVGPSSASG
AFAPDDAEGGGGTTASGEGGRKEYPLPRGTPSLSSRSHRRGGRTRPEGAA
SAVGAGGSYAATAPSRIAEGFPPSTSTSTSTSTSTSTTEAATAADATPRQ
RDSLRRDDSDPFSTSFEEFSSSG
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mRNA from alignment at L-elsbetiae_contig1695:16062..22378-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1695.4663.1 ID=mRNA_L-elsbetiae_contig1695.4663.1|Name=mRNA_L-elsbetiae_contig1695.4663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6317bp|location=Sequence derived from alignment at L-elsbetiae_contig1695:16062..22378- (Laminarionema elsbetiae ELsaHSoW15)
GTGTCTGGGGAGGGGGAGAAGCAGGTTCTCTTCTCGGTGGGCGGTGGGAT
TCCCGCCGGTGCTCTCTGCGCCCTCATGGGGCCAAGCGGCAGCGGTGAGA
CAAAGAAACTGACAGTCCCGTCGTTGTCGTTATTGTTGTTGTTGGTGGTG
GTGTTGTCGCTGTTGTTGTTGGTGGTGGTGTGGTGGTGTCGTTGTTGTTG
TTGATGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGCTTTTGTT
GCTGTTGCTGGTGGTGGTGTGGTGTTGTTGTTGTTGTTGTTGTTGCTGTT
GTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCCGCTGCTGCTGCTGATGCTGATGCGTATACCGACTCTTTCGCTGCTG
GCCTCCATTTCGCTGCACAATCGGTCCGAGCGAGTTCAGTTCCAAACCCC
ACCACACCGCCCGGCCCGCTCGTACAGGCAAGAGCACACTGCTGGATGTC
CTCAGCGGGCGGCCCCGCACATCAGTGGGACGAGCCGAGGGGACGGTGTC
CTTCGCCGGGAGGCCCGTCACTGACAACCGGGCGAGTGTGCCCTCCTGCA
GTATTTAGCAGTATTTCCATTGAACTGATCCAAGCCCGGGATGATTGGTT
GTTTGATTGATTGCCGGGGGGGCAGACCGGAGGGGGAGATCGAAGGGACT
CTTCTGTTTGCTTGGCTACAGTGTACATACGTACACACGTAAGGGTGACG
GTTCACCACCGGTCCCTTGAGAGACAAAGTCATCCTCGCGGGAGAGACGC
CATCATGTCTGAAGGTGGCGCTCCTTCCTTGCGCCTCTGCCACTTGGTTT
CGTAGACACGAGTTGTCTTGTTGTGGTATGTACGTAGTGCCCATCCAGAT
TGTCAATCTTGTGCATTTATTGCGGCCATGCTTGCATCGCCCATTCCCGC
GACCGTTTCACGAGTTCGTTGTTCTTTTGTGTGAAGCAAAGGAACTTCCG
TAGTAAATAAATCATGTCACATCCTGTCGAAACCACTCGTACCGGGGGCG
GTTTATCTCCATGTAGCCGTCAGACCTCCACAAAAGACCCACCTCCAAAA
CGCCTCCTCCTCCTCCTCCTCACCACCCCGTCCGCTCAACCCCGGCGCCC
CAATCGTTCATTTGCGGTTCCCGCAGGCGTCCTACGTCCGCCGGTCCGGC
TACATCCGCCGGGGCCACGCCGGCTTCGTGGGAGGGCTGACCGCGTTCGA
CAACCTGGTGGCCGCGGCCATGCTGAGGACGCCGGGCAGCCTCGAGGACC
AGGCCGCCAGGGTGGAAACGTGAGCGAAACCGATAAAACCGCTCCGTGTG
GTGTGGTTGGTCTCCGGGGCGGGGGGGGCGAGGGTGTGTGTGTGTGTATA
CTGTAGCCTACATATTTTCTAGTTGGGGTTACGCAGATTCCGGCGGGCGT
GGTGGGGAGGTGGGGGGTGGGAGTTGAACAACCCCGAACGGATCCCCCTA
TACTAATTCCTACATGGACAAAAATCGAAATTTTGGGTCCCGCGGGGGGG
GGGGGGGGTCTGCTGAACTGCTGCTTGTTTTTGTGGTCGATGCTGCTGCT
GTTTCTGTTTCTCGTCTGCCATCCGATACCGATGCCAATCTGCAGATCTA
TTACAAGGGGCGAGTGCTGCCCCTTTTTGAATCGTGCCGACGATGTTGCG
CAACACCGAGATGGAAAAAAATACAGTCTCCCCTCCGGAATGGCTTTTTT
ACGGGTCGGAACGTGAAATACGTATTTGGGGCGGCTGTTTGTCAGCGGCC
TAACAATAGTAGCGAGAGGAACATTTACTGAAAGTTCCGATAATGATTTT
TTTTTTTTTTTGTTTCGCTGATTCGCCTACCCTCCTCTCCTTGGAGAACT
GAAACGTTGCCGGCCTCTCTGCCTCAGTAATATAGTAATATAAATAACAA
GAGAGCCGACACTACAACAGCTAAGTCTTGAGACCCCCACCCCGCTCGCC
GCTGCCGCCGCCGCCGCCGCCGCCCACGACTGCAGGGTGATCCGAGAGAC
GACCCTAGAGGCCAGCCGGGACTGCAAGGCGAGCGACCTCACGGCGGGTC
AGAAACGCCGCCTGTCTCTGGCGGTGGAACTCCTGTCCGACCGCCGCGTC
TTGCTCCTGGACCAGCCCTTCCTCGGCCTGGCGGCTGCCGAGGCTCTTGA
CCTGATGAACGTCCTCTGTCGCCTTTCGAGGAAAAAGGTAGCTGGATTAT
CAGTAGACTAACCTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCAGATT
AGAAATCGTCCCGATCCCTCTATCCAGTACACTTCCATGAGTCCGTACTG
ATCCAACACTGACAGTCCCGTGGTCGATTCCCCGTGGTGACAGGATAACT
TAACCTAAAAAAGGGAAAGAGACTACTGAAAAAAAAATAACCAAAATGGA
CCCGAAGGATACACACACAGCACAGAAAAAATATATATCACGGACGGTCT
GGAGCCCTCCGCTCCCCTCTACACGCTATGTAACCTACGCGGGTTTTTAC
GGAAGCTAGCATATGGGATGAAGTATGGAAACGGCTAAGGGGGGGGTCGG
TATGAGGTCAGGGGTAGGGTTACGGAACCCCTATTTATTACTATTTCCTA
GTAAAACTGAATTTCTTCGCTAAGGCAGTTCCTATGTAGATTGTGCATGC
TTTGTTTGCGCTGTTTGCGCTGTTTTGCGCTGTCAAGATATGGATTTTAT
TTCATCTGTAGCGGTTGTTGCTGCTACATGCTGCTGTGGAATGGAAAGGC
GTGCGTGCGTTCACACTTGGAGGTTTGCTGCTTCAGAGAGAGCACGCGAG
AGGCTCGTACTGTTGCAAAAAAAGTGATGGTAATAGTGGTATGCGGTATC
CCCCCCCCCCCCCCGTGCGGGGCGGAGAATGTCGACTTCGCGCAATGGAG
GGGCGCGGTATAATCGAGGGGAGGAGTGTGTGGACCTGTGCGGGCCTGGC
CGGCGAGAACCCGGCGCGGAACCCCCCGGTTTTGTTGTTGTACCAAGATA
GTGGTGTTGGCTGTGTTCCAGTTTTGTTTTTACCTCACATAGCGTGTAGA
GGGGAGCGGAGGGCTCCAGATTCGATATCTGTTTTATTGTTGCTTTGCTG
GCCCTTCCGGTCCATTTTATTTTTCGTGTACCTTTTCTTGGGTAAAAGTT
AGCCATAAGCTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGA
TTAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTA
ATGTGAAGACAACATACACACATACATACATGCCAATAGGAGCATGGGCA
GACACAGGGTGCCACCATAGCTGCCTCTGAATTGTCAACACCTCAACACC
AGACGAACATGAAAATCATTCGATACCGTCCTCCAACGCGCCTGACCTGC
CTGCAAGATGAATTTGTCCCGCTCGGCCGACGATTCCTAGCGGATGCTGC
TCACCCTTCATAGCTTGTGTCTAATTTATTTTTGCTTTCCGCGGCGTGGA
GTGCACCCCCTTAAGTGTTTTGTGACCACAGGGCCCCCCGCGATGATGTT
TTTTGGCTAAATAAAGAGCTAATATGAGAATCAACAACAACCCTTTAATG
CGAAATGCGAGCGGTGTCCGGCGACAACCGGGCTCGCGCCGCCCCTCAGT
GTAGCGCTTTGTACAAACGCGAGGCTCCCACCGTAATGACGGGAAGAGTG
ATACATACCGGGTGCGTTTTATAAAGTGGAAATCCCCTCCCCTTGTTTTT
GCACCCCCCGGTGCGCGTTCTGTCCGCGACCAATGGCTCTGCGATAATTG
TGTGCACGGAAAAAAAATGGAATCAAATCGTCTCTCTGATTTATCTTGTC
TCTAATTCATCTTGTTTTTTTCATCGCACCCCAGTGCGAGCAGTGCGAGT
GATCTCTCGGATGAGTGGGTGGCATCAATCGCATGACTAACTACGGTTTG
TCCAACTATTCGCGTGACTGCGGTATTGTCTATCCGGGAACTACTGTCAT
GAGTGCGTCCACCCCGCTGACCCCCTTCCTTTCTGTCTGCCTCTCGACCC
GAAACGAAACGCACGCCAGGTTACCGTAGTGGTGTCGGTCGACCGGCCTA
GGCCAGAGATATGGAGGCTTTTTTCGCACAGCGTCCTCCTCAAGAGCGGC
AGGGCGGTGTTTTGCGGCTGCGCGGACCAAGCTTTGCAGGAGACTGCAAG
GTTTGATTCAGCCCGCCTTTGTATCTCGTACATACCATACGTATTCATGG
ACATGCTCTCTCGTCCGATTGATGCCCCTAGATGCCCTGCTCCGCACGCG
CGCTGCGCTGATTGATGCATGCGACGTTTTGTTTCTTTTTTCCCGGGGTC
GAGAGGCCCGGATAAATATGTCGAGCGTCGTGCAGCATTGTGATACCTAT
CTACCCTGTTTGGAACATGAGTCAGGTCATCAAAAACGGAAACCTAACCC
ACATTTGAGACGGGACTCCGTGGGGTTCAACCGGTATTCCACATAATTTA
CGGTTATTTTTTGAAAGATAAACCAGATAATCAAAAACAGAACCTAGCCC
ACATTTGAGACGGGACTCCGTGGGGTTCAACCGGTATTCCACATAATTTA
CGGTTATTTTTTGGAAGATAAACCAGATAATCAAAAACGGAATCTAGCCC
ACATTTGAGACGGGACTCCGTGGGGTTCAACCGGTATTCCACATAATTTA
CGGTTATTTTTTGAAAGATAAACCAGATAATCAAAAACGGAATCTAGCCC
ACATTTGAGACGGGACTTCGTGGGGTTCAACCGGCACCCCTATGTATATA
GTGACGTCATATTGATCCGCCGGCCCTGTTTGTTTTCAAAAGTATTTTCA
ACAATCTCCGTTGCGGAGTATGGTAAGAGTCGGGAGTCGGGAATGCTTTT
GGGGGTTGGTGTGACGAAGACGTCTTATCGGGCCGCGCCGGGCCGAGTCG
AGCTTCATAGCATCGGTGCTCTCGCGCCCACGAACCGAACGACTTCGCGG
AGCCCCCAGCGATTGTTGAGCCGTTGAGCTGACAGCACACACAGCGATCG
CGCGCGCTTCGCTTGTAACTCTCGAGAACCACCACCGTCTGCTTGAGCTT
AGAGCGGTTTGCTCCGCCCGCCACGCCGCTCTTTTGTGTGTGTTGTGGGG
GCTGCTTTGTGTGTTCACACACGCAGCAGCCTGTCCCAAAGACAAGAATA
TTCTGTCTTGTCTGGGACTGTACTATCAAACGCAATGGCGTTGGCTCCGA
GTGCCCGCCCTCTGTCAGCCTTTTTTGAGTCTTGAAGCCAAAATCCGGTT
CTTAAACCCGAACCGTGTCGTCTATCTTGTTGCTGGCTGTTTTCTCACGG
TTACATGAAGGTGGCTCTTATTGAAATTTTGGCAAGGGCCCAAAGACGTA
CATACCAACAATCCCTTCGCGTATATCAACTCGCACAGCTGTTACTGTTA
ACCTCCCCCCCCCCCTCTCCCTTGCCGGCTCCCTTGCACGCGACCCCTTG
TCCCTCCTCACCTCTCCCCAAACCAAGGTATCTGCCTGAGTCGGCGGCGG
CGGCGGCGGCGGTAGCTGCTGAATCGATCCTCGACATGCCGCAGCGGCAA
GCTGAGCGGCGCTCCCGAGCACTCAGCGCCTCCGAGGCCACGGAGACCGA
CATGATGTCGTCGGACATGGCGTCGACGGACATGGCGTCGATGGATATGG
CGTCGACGGTGGCCAGTGTGGCGTCGGGGGCGGGGTGCCGCCTCCACCGC
GGCTTAGACGCCAGCCAGGAAGAGGGAGGAGGCGGCAGCGGCGGCGGCGG
CGGCGGCGGCGGCGGTGGCAGCTTCGGCTACCTGTCCCCCGCGACGTATT
CTCCCTCCTCGCACCACGCGTACGTCGGTCCCTCGAGCGCGAGCGGAGCT
TTCGCCCCGGATGACGCGGAAGGGGGGGGCGGCACCACCGCCAGCGGCGA
GGGGGGCAGGAAGGAGTACCCCCTTCCCCGGGGTACCCCCTCCCTGAGCT
CCCGCTCCCACCGCAGGGGCGGCAGGACCCGACCGGAGGGCGCCGCCAGC
GCCGTCGGCGCGGGGGGGAGTTACGCGGCCACCGCCCCTTCCCGGATCGC
GGAAGGTTTTCCCCCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCA
CCAGCACCACCGAGGCTGCCACGGCTGCGGACGCCACTCCGCGGCAGCGT
GACAGCCTCCGCCGAGACGACTCGGACCCCTTTTCGACGTCCTTCGAGGA
GTTCTCGTCCAGCGGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1695:16062..22378-

>mRNA_L-elsbetiae_contig1695.4663.1 ID=mRNA_L-elsbetiae_contig1695.4663.1|Name=mRNA_L-elsbetiae_contig1695.4663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2838bp|location=Sequence derived from alignment at L-elsbetiae_contig1695:16062..22378- (Laminarionema elsbetiae ELsaHSoW15)
GTGTCTGGGGAGGGGGAGAAGCAGGTTCTCTTCTCGGTGGGCGGTGGGAT
TCCCGCCGGTGCTCTCTGCGCCCTCATGGGGCCAAGCGGCAGCGGTGTCT
GGGGAGGGGGAGAAGCAGGTTCTCTTCTCGGTGGGCGGTGGGATTCCCGC
CGGTGCTCTCTGCGCCCTCATGGGGCCAAGCGGCAGCGGCAAGAGCACAC
TGCTGGATGTCCTCAGCGGGCGGCCCCGCACATCAGTGGGACGAGCCGAG
GGGACGGTGTCCTTCGCCGGGAGGCCCGTCACTGACAACCGGGCGAGTGC
AAGAGCACACTGCTGGATGTCCTCAGCGGGCGGCCCCGCACATCAGTGGG
ACGAGCCGAGGGGACGGTGTCCTTCGCCGGGAGGCCCGTCACTGACAACC
GGGCGAGTGCGTCCTACGTCCGCCGGTCCGGCTACATCCGCCGGGGCCAC
GCCGGCTTCGTGGGAGGGCTGACCGCGTTCGACAACCTGGTGGCCGCGGC
CATGCTGAGGACGCCGGGCAGCCTCGAGGACCAGGCCGCCAGGGTGGAAA
CGCGTCCTACGTCCGCCGGTCCGGCTACATCCGCCGGGGCCACGCCGGCT
TCGTGGGAGGGCTGACCGCGTTCGACAACCTGGTGGCCGCGGCCATGCTG
AGGACGCCGGGCAGCCTCGAGGACCAGGCCGCCAGGGTGGAAACGGTGAT
CCGAGAGACGACCCTAGAGGCCAGCCGGGACTGCAAGGCGAGCGACCTCA
CGGCGGGTCAGAAACGCCGCCTGTCTCTGGCGGTGGAACTCCTGTCCGAC
CGCCGCGTCTTGCTCCTGGACCAGCCCTTCCTCGGCCTGGCGGCTGCCGA
GGCTCTTGACCTGATGAACGTCCTCTGTCGCCTTTCGAGGAAAAAGGGTG
ATCCGAGAGACGACCCTAGAGGCCAGCCGGGACTGCAAGGCGAGCGACCT
CACGGCGGGTCAGAAACGCCGCCTGTCTCTGGCGGTGGAACTCCTGTCCG
ACCGCCGCGTCTTGCTCCTGGACCAGCCCTTCCTCGGCCTGGCGGCTGCC
GAGGCTCTTGACCTGATGAACGTCCTCTGTCGCCTTTCGAGGAAAAAGGT
TACCGTAGTGGTGTCGGTCGACCGGCCTAGGCCAGAGATATGGAGGCTTT
TTTCGCACAGCGTCCTCCTCAAGAGCGGCAGGGCGGTGTTTTGCGGCTGC
GCGGACCAAGCTTTGCAGGAGACTGCAAGGTTACCGTAGTGGTGTCGGTC
GACCGGCCTAGGCCAGAGATATGGAGGCTTTTTTCGCACAGCGTCCTCCT
CAAGAGCGGCAGGGCGGTGTTTTGCGGCTGCGCGGACCAAGCTTTGCAGG
AGACTGCAAGGTATCTGCCTGAGTCGGCGGCGGCGGCGGCGGCGGTAGCT
GCTGAATCGATCCTCGACATGCCGCAGCGGCAAGCTGAGCGGCGCTCCCG
AGCACTCAGCGCCTCCGAGGCCACGGAGACCGACATGATGTCGTCGGACA
TGGCGTCGACGGACATGGCGTCGATGGATATGGCGTCGACGGTGGCCAGT
GTGGCGTCGGGGGCGGGGTGCCGCCTCCACCGCGGCTTAGACGCCAGCCA
GGAAGAGGGAGGAGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTG
GCAGCTTCGGCTACCTGTCCCCCGCGACGTATTCTCCCTCCTCGCACCAC
GCGTACGTCGGTCCCTCGAGCGCGAGCGGAGCTTTCGCCCCGGATGACGC
GGAAGGGGGGGGCGGCACCACCGCCAGCGGCGAGGGGGGCAGGAAGGAGT
ACCCCCTTCCCCGGGGTACCCCCTCCCTGAGCTCCCGCTCCCACCGCAGG
GGCGGCAGGACCCGACCGGAGGGCGCCGCCAGCGCCGTCGGCGCGGGGGG
GAGTTACGCGGCCACCGCCCCTTCCCGGATCGCGGAAGGTTTTCCCCCCA
GCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCACCGAGGCT
GCCACGGCTGCGGACGCCACTCCGCGGCAGCGTGACAGCCTCCGCCGAGA
CGACTCGGACCCCTTTTCGACGTCCTTCGAGGAGTTCTCGTCCAGCGGGG
TATCTGCCTGAGTCGGCGGCGGCGGCGGCGGCGGTAGCTGCTGAATCGAT
CCTCGACATGCCGCAGCGGCAAGCTGAGCGGCGCTCCCGAGCACTCAGCG
CCTCCGAGGCCACGGAGACCGACATGATGTCGTCGGACATGGCGTCGACG
GACATGGCGTCGATGGATATGGCGTCGACGGTGGCCAGTGTGGCGTCGGG
GGCGGGGTGCCGCCTCCACCGCGGCTTAGACGCCAGCCAGGAAGAGGGAG
GAGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCAGCTTCGGC
TACCTGTCCCCCGCGACGTATTCTCCCTCCTCGCACCACGCGTACGTCGG
TCCCTCGAGCGCGAGCGGAGCTTTCGCCCCGGATGACGCGGAAGGGGGGG
GCGGCACCACCGCCAGCGGCGAGGGGGGCAGGAAGGAGTACCCCCTTCCC
CGGGGTACCCCCTCCCTGAGCTCCCGCTCCCACCGCAGGGGCGGCAGGAC
CCGACCGGAGGGCGCCGCCAGCGCCGTCGGCGCGGGGGGGAGTTACGCGG
CCACCGCCCCTTCCCGGATCGCGGAAGGTTTTCCCCCCAGCACCAGCACC
AGCACCAGCACCAGCACCAGCACCAGCACCACCGAGGCTGCCACGGCTGC
GGACGCCACTCCGCGGCAGCGTGACAGCCTCCGCCGAGACGACTCGGACC
CCTTTTCGACGTCCTTCGAGGAGTTCTCGTCCAGCGGG
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