mRNA_L-elsbetiae_contig16701.4531.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.280e-34 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = -2 Query: 4 EVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMK 330 EVP+ W P+L+L AAYSPW G PSEWKHL+SS GP K++ ++ +D NPVC+PA M R++PNGDA SRRQH AAIK+EKE E+KAT DKE +E+RKE L K Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGG--DVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKK 223
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.120e-34 Identity = 67/109 (61.47%), Postives = 81/109 (74.31%), Query Frame = -2 Query: 1 VPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMKG 327 VP+ W P+L+L AAYSPW G PSEWKHL+SS GP K++ A ++T+D NPVC+PA M R+NPNGDA SRRQH AAIK+EKE E KA +KE +EARKE L KG Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGA--DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLETKKG 243
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 127 bits (319), Expect = 5.580e-33 Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = -2 Query: 4 EVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPK-KRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMK 330 EVP+ W P+L+L AAYSPW G PSEWKHL+SS GP KRK ++T+D NPVC+PA M R+NPNGDA SRRQH AAIK+EKE E+K DK +EA KEAL K Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG---DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKK 136
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 120 bits (300), Expect = 2.310e-29 Identity = 62/110 (56.36%), Postives = 77/110 (70.00%), Query Frame = -2 Query: 1 EVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMKG 330 EVP+ W P+L+L AAYSPW G PSEWKHL+SS G K+++ ++T+D NPV +PA M R+NPNGDA SRRQH AAIK+EKE E+KA DKE + AL KG Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGG--DVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALETKKG 227
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 105 bits (261), Expect = 1.010e-22 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = -2 Query: 4 LAAQAAARLRQEKQATGAS---------KDPKEDEVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPP----------EITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMK 405 LA +AA LR+E + AS + +++PD ++ PYL+LA +S W GNTPSEWKHL +SSGP+ R S E+ + NP+ +P AM +N NGDA SRRQ+ A IKKEKE KK K+KEN R EAL K Sbjct: 251 LARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRK 403
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5KVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE3_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 7.000e-21 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = -2 Query: 109 DEVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPK-KRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSR 333 +EV + W P+L+ AAYSPW G PSEWKHL+SS GP KRK ++T+D NPVC+PA M R+NPNGDA SR Sbjct: 30 EEVSEWWVFPFLLHTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGG---DVTVDSENPVCSPAVMSRLNPNGDALSR 102
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.180e-20 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = -2 Query: 109 DEVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPK-KRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSR 333 +EVP+ W P+L+L AAYSPW G PSEWKHL+SS GP KRK ++T+D NPVC+PA M R+NPNGDA SR Sbjct: 398 EEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG---DVTVDSENPVCSPAVMSRLNPNGDALSR 470
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 8.520e-16 Identity = 48/109 (44.04%), Postives = 60/109 (55.05%), Query Frame = -2 Query: 4 EVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPPEITLDKSNPVCNPAAMVRINPNGDAFSRRQHAAAIKKEKELEKKATKDKENEEARKEALSAMK 330 EVP+ W P+L+L AAYSPW G PSEWKHL+SS GP K++ ++T+D NPVC+PA E+KA DKE +EARKEAL K Sbjct: 105 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGG--DVTVDSENPVCSPA---------------------------ERKAATDKELQEARKEALETKK 184
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5KDD8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD8_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 8.990e-14 Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 154 PAGAGPAVMSALNATDMQPAGAGEAAGEGSHNRATSNLAAQAAARLRQEKQATGASKDPKED----EVPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPK-KRKSTAPPEITLDKSNPVCNP 516 PAG GPA +AL T+++ +LAA AAA +R+E++ EVP+ W P+L+L AAYSPW G PSEWKHL+SS GP KRK ++T+D NPV +P Sbjct: 61 PAGQGPAAQAALAETEVRQ----------EPGSTPISLAAAAAANIRREQEXXXXXXXXXXXXXXXEVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGG---DVTVDSDNPVSSP 173
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Match: A0A6H5KAW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW6_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 4.090e-12 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 7 VPDSWFCPYLILAAAYSPWGGNTPSEWKHLESSSGPKKRKSTAPPEITLDK--SNPVCNPAAMVRI--------NPNGDAFSRRQHAAAIKKEKELEKKATKDKEN----EEA---RKEALSAM 327 VPD WF PY+I+AAA+SPWGGN P++W++L +S G AP D+ S P+ +P A+ N NG++ SRR H AA+ E + ++ +D EN E+A +KEAL AM Sbjct: 401 VPDGWFHPYIIIAAAWSPWGGNCPTQWQNLSASDG------KAPTNKKGDQIASGPLSSPGALAESTASARKMENNNGNSVSRRAHQAALNAETDRVRRDKRDNENMAQQEKATALKKEALQAM 518 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16701.4531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16701.4531.1 >prot_L-elsbetiae_contig16701.4531.1 ID=prot_L-elsbetiae_contig16701.4531.1|Name=mRNA_L-elsbetiae_contig16701.4531.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp MRYGQNQESGTSSSLGSLLAPVACFSWRNLAAACAARFDVALLWEPSPAAback to top mRNA from alignment at L-elsbetiae_contig16701:1524..2175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16701.4531.1 ID=mRNA_L-elsbetiae_contig16701.4531.1|Name=mRNA_L-elsbetiae_contig16701.4531.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=652bp|location=Sequence derived from alignment at L-elsbetiae_contig16701:1524..2175+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16701:1524..2175+ >mRNA_L-elsbetiae_contig16701.4531.1 ID=mRNA_L-elsbetiae_contig16701.4531.1|Name=mRNA_L-elsbetiae_contig16701.4531.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig16701:1524..2175+ (Laminarionema elsbetiae ELsaHSoW15)back to top |