mRNA_L-elsbetiae_contig1670.4524.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1670.4524.1
Unique NamemRNA_L-elsbetiae_contig1670.4524.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: A0A7S6ZPC8_9STRA (Elongation factor Tu, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6ZPC8_9STRA)

HSP 1 Score: 739 bits (1908), Expect = 3.380e-268
Identity = 365/407 (89.68%), Postives = 392/407 (96.31%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFERTKPH+NIGTIGHVDHGKTTLTAAITA L+L G S AKKYEDIDAAPEERARGITINTAHVEYETD+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDD ELLELVELEVRELLS+YDFPGDDIPIVAGSALQALE ++ EP LKKG+NKW+DKIY+LMD++D YIPTP RDI+K+FLMAIEDVFSITGRGTVATGRIERG+VKVGETVELVGLG+T++T VTGVEMFQKTL+EG AGDNVGILLRG+QKNEIERGMVL++PGTITPH  FESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTG+I SFT+DDG++VEMVMPGDRIKMNAELI++IAIEEGMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: A0A516ZAG0_9STRA (Elongation factor Tu, chloroplastic n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZAG0_9STRA)

HSP 1 Score: 707 bits (1825), Expect = 1.490e-255
Identity = 348/407 (85.50%), Postives = 378/407 (92.87%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER+KPH+NIGTIGHVDHGKTTLTAAITAVLS  G+S  K Y DIDAAPEE+ARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP+IVVFLNKEDQVDD EL+ELVELEVRELLSNYDFPGDDIPIV GSALQALEA+   P + +G+NKW+DKI+NLMD VD YIPTP RD +K+FLMA+EDVFSITGRGTVATGRIERGI+ VG+T+E+VGLGDT+ TTVTGVEMFQKTLD G+AGDNVGILLRGVQK +IERGMVLSKPGTITPH +FE EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTG I +FT+DDG +VEMVMPGDRIKM AELIS+IAIE GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERSKPHVNIGTIGHVDHGKTTLTAAITAVLSTIGNSTLKNYADIDAAPEEKARGITINTAHVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKEDQVDDEELIELVELEVRELLSNYDFPGDDIPIVPGSALQALEAVIATPAIGRGDNKWVDKIFNLMDEVDNYIPTPERDTEKTFLMAVEDVFSITGRGTVATGRIERGIINVGDTIEIVGLGDTQTTTVTGVEMFQKTLDSGMAGDNVGILLRGVQKTDIERGMVLSKPGTITPHTLFEGEVYILTKEEGGRHTPFFTGYRPQFYVRTTDVTGNIKAFTADDGTDVEMVMPGDRIKMTAELISAIAIEAGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: B2XTC8_HETAK (Elongation factor Tu, chloroplastic n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTC8_HETAK)

HSP 1 Score: 701 bits (1810), Expect = 2.770e-253
Identity = 346/407 (85.01%), Postives = 375/407 (92.14%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPH+NIGTIGHVDHGKTTLTAAITA LSL G ++ K YEDIDAAPEERARGITINTAHVEYETD RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVPHIVVFLNKEDQVDD ELL LVELEVR+LLSNYDFPGDDIP + GSALQAL+A+ +   +KKGENKW+DKIY LM++VD YIP P RD+DK+FLMA+EDVFSITGRGTVATGRIERG+VKVGETV++VGL +T+ TTVTG+EMFQKTLDEG+AGDNVGILLRGVQK +IERGMVL+KPGTI PH  FESEVYIL KEEGGRHTPFF+GYRPQFYVRTTDVTGKI  FT+DDG+ VEMV+PGDRIKM AELIS IAIE GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERNKPHVNIGTIGHVDHGKTTLTAAITATLSLGGTAQLKNYEDIDAAPEERARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKEDQVDDEELLGLVELEVRDLLSNYDFPGDDIPCIPGSALQALQAIQENNTIKKGENKWVDKIYQLMEAVDEYIPAPERDVDKTFLMAVEDVFSITGRGTVATGRIERGVVKVGETVQIVGLSETRETTVTGIEMFQKTLDEGMAGDNVGILLRGVQKEDIERGMVLAKPGTINPHTNFESEVYILRKEEGGRHTPFFAGYRPQFYVRTTDVTGKISQFTADDGSIVEMVVPGDRIKMTAELISPIAIEAGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: C6KIM9_AURAN (Elongation factor Tu, chloroplastic n=4 Tax=Pelagomonadales TaxID=54409 RepID=C6KIM9_AURAN)

HSP 1 Score: 699 bits (1803), Expect = 3.350e-252
Identity = 344/407 (84.52%), Postives = 375/407 (92.14%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER+KPHINIGTIGHVDHGKTTLTAAIT  L+L  D  AK YEDIDAAPEERARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDD ELLELVELEVRELLS+YDFPGDDIP VAGSAL A+EA++ +  + +G+NKW+DKIY LMD+VD YIPTPVRD +K+FLMAIED FSITGRGTV+TGRIERG VKVGETVE+VGLGDT+ TTVTG+EMFQKTL+EG+AGDNVG+LLRG+QK +IERGMVL+  GTITPH +FE+EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTG I  FT+DDG  VEMVMPGDRIKM AELIS+IAIE+GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERSKPHINIGTIGHVDHGKTTLTAAITMTLALGTDGAAKNYEDIDAAPEERARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDDELLELVELEVRELLSSYDFPGDDIPCVAGSALMAIEAINADSSVARGDNKWVDKIYGLMDAVDDYIPTPVRDTEKTFLMAIEDAFSITGRGTVSTGRIERGTVKVGETVEIVGLGDTRETTVTGIEMFQKTLEEGLAGDNVGLLLRGIQKTDIERGMVLAASGTITPHTLFEAEVYILTKEEGGRHTPFFTGYRPQFYVRTTDVTGNIKQFTADDGTEVEMVMPGDRIKMTAELISAIAIEDGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: A0A6P1AKF6_9CYAN (Elongation factor Tu n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AKF6_9CYAN)

HSP 1 Score: 698 bits (1801), Expect = 6.750e-252
Identity = 341/409 (83.37%), Postives = 378/409 (92.42%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKINK 1227
            MAR KFER KPH+NIGTIGHVDHGKTTLTAAIT  L+ +G + AKKYEDIDAAPEE+ARGITINTAHVEY+TD RHYAHVDCPGHADYVKNMITGAAQMDG ILVVSAADGPMPQTREHILL+KQVGVP +VVFLNK+DQVDD ELLELVELEVRELLS+YDFPGDDIP+VAGSAL ALEAL+K+P +KKG+N+W+DKIY LMD+VD YIPTP RD+DK FLMA+EDVFSITGRGTVATGRIERG VKVGETVELVG+ DTK+TTVTGVEMFQKTLDEG+AGDNVG+LLRG+QK++IERGMV++KPG+ITPH  FE+EVY+L KEEGGRHTPFF  YRPQFYVRTTDVTG I +FT+DDG+  EMVMPGDRIKMN ELI+ IAIE+GMRFAIREGGRTIGAGVVSKI K
Sbjct:    1 MARAKFERNKPHVNIGTIGHVDHGKTTLTAAITLTLAASGKATAKKYEDIDAAPEEKARGITINTAHVEYQTDNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLAKQVGVPSLVVFLNKQDQVDDEELLELVELEVRELLSSYDFPGDDIPVVAGSALLALEALTKDPNIKKGDNEWVDKIYELMDNVDEYIPTPERDVDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGETVELVGIKDTKSTTVTGVEMFQKTLDEGMAGDNVGVLLRGIQKDQIERGMVIAKPGSITPHTEFEAEVYVLKKEEGGRHTPFFPNYRPQFYVRTTDVTGTITAFTADDGSPAEMVMPGDRIKMNVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 409          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic n=94 Tax=Sar TaxID=2698737 RepID=EFTU_THAPS)

HSP 1 Score: 696 bits (1797), Expect = 2.750e-251
Identity = 344/409 (84.11%), Postives = 372/409 (90.95%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKINK 1227
            MAREKFERTKPH+NIGTIGHVDHGKTTLTAAITA L+  G + AK Y DID APEERARGITINTAHVEYET  RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVPHIVVFLNK+DQVDD ELLELVELEVRELLS YDFPGDDIPI  GSALQA+EALS  P +K+G+N W+DKI+ LMD+VDAYIPTP RD++K+FLMAIEDVFSITGRGTVATGRIERG+VKVG+ VE+VG+GDT+ TT+TG+EMFQKTL+EG AGDNVGILLRGV +  IERGMVLSKPGTITPH  FESEVY+LTKEEGGRHTPFF+GYRPQFYVRTTDVTG I  FT+DDG  VEMVMPGDRIKM AELI  +AIEEGMRFAIREGGRTIGAGVVSKI K
Sbjct:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLATAGGAVAKDYSDIDGAPEERARGITINTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKQDQVDDDELLELVELEVRELLSTYDFPGDDIPICPGSALQAIEALSSNPDVKRGDNPWVDKIFALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDNVEIVGVGDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGSIEQFTADDGTIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIVK 409          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: K9ZWB2_9STRA (Elongation factor Tu, chloroplastic n=24 Tax=Ochrophyta TaxID=2696291 RepID=K9ZWB2_9STRA)

HSP 1 Score: 696 bits (1796), Expect = 3.900e-251
Identity = 341/407 (83.78%), Postives = 375/407 (92.14%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFERTKPH+NIGTIGHVDHGKTTLTAAIT+ LSL GDSKAKKY+DIDAAPEE+ARGITINTAHVEY+T+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVPHIVVFLNK DQVDD ELLELVELEVRELLSNYDFPG++IP V+GSAL ALEA+S     K+GEN+W+DKI++LMD+VD+YIPTPVRD+DK+FLMA+EDVFSITGRGTVATGRIERG +KVGET+E+VG+ +TK TTVTG+EMFQKTLDEG AGDN+GILLRGVQK +I+RGMVL+KPGTI PH  FE+EVYIL KEEGGRHTPF  GYRPQFYVRTTDVTG I  FT+DDG   EMV+PGDRIKM AELIS IAIE GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITSTLSLLGDSKAKKYDDIDAAPEEKARGITINTAHVEYQTETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKADQVDDDELLELVELEVRELLSNYDFPGEEIPFVSGSALMALEAVSNSTVTKRGENQWVDKIFDLMDAVDSYIPTPVRDVDKTFLMAVEDVFSITGRGTVATGRIERGTIKVGETIEIVGIVETKTTTVTGLEMFQKTLDEGFAGDNIGILLRGVQKGDIQRGMVLAKPGTIKPHKRFEAEVYILKKEEGGRHTPFLPGYRPQFYVRTTDVTGNITGFTADDGAAAEMVIPGDRIKMTAELISPIAIEAGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: B7T1V7_VAULI (Elongation factor Tu, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1V7_VAULI)

HSP 1 Score: 694 bits (1792), Expect = 1.650e-250
Identity = 346/408 (84.80%), Postives = 379/408 (92.89%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSL-TGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPH+NIGTIGHVDHGKTTLTAAI+A L+L + ++ AKK+EDIDAAPEERARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP IVVFLNKEDQVDD+ELLELVELEVRELL+NYDF GD IPI  GSALQAL A+     + KG+N+W+DKI+ LM++VD YIPTPVRD+DK+FLMA+EDVFSITGRGTVATGRIERGIVKVGETVE+VGL DT+ TTVTGVEMFQKTLDEG+AGDNVGILLRGVQK++I+RGMVLSKPGTITPH  FE EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTG+I  FT+DDG+NVEMVMPGDRIKMNAELIS IAIEEG RFAIREGGRTIGAG+VSKI
Sbjct:    1 MAREKFERKKPHVNIGTIGHVDHGKTTLTAAISATLALGSSNAVAKKFEDIDAAPEERARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPSIVVFLNKEDQVDDVELLELVELEVRELLNNYDFSGDTIPICPGSALQALNAILANSNINKGDNEWVDKIFKLMNAVDEYIPTPVRDVDKAFLMAVEDVFSITGRGTVATGRIERGIVKVGETVEIVGLLDTRTTTVTGVEMFQKTLDEGLAGDNVGILLRGVQKDDIQRGMVLSKPGTITPHKGFEGEVYILTKEEGGRHTPFFAGYRPQFYVRTTDVTGQIKFFTADDGSNVEMVMPGDRIKMNAELISPIAIEEGSRFAIREGGRTIGAGIVSKI 408          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: A0A7C3UYJ0_9BACT (Elongation factor Tu n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7C3UYJ0_9BACT)

HSP 1 Score: 693 bits (1789), Expect = 4.540e-250
Identity = 340/407 (83.54%), Postives = 376/407 (92.38%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            M+R KFER KPH+NIGTIGHVDHGKTTLTAAI+A L+ +  SKAKK+++IDAAPEE+ARGITINT+HVEYETD RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP+IVVFLNKEDQVDD ELLELVELEVRELLSNYDFP ++IP V GSAL ALE L+K P LK+GENKW+DKIY LMD+VD YIPTP RD+DK FLMAIEDVFSITGRGTVATGRIERG +KVG+T+ELVGL +TK TT+TG+EMFQKTL+EG+AGDNVGILLRG+QK++IERGMVL+KPGTITPH  FE+EVYIL KEEGGRHTPFFSGYRPQFYVRTTDVTG I SFTSD+G  VEMVMPGDRIKMN ELI+ IAIE+GMRFAIREGG+TIGAGVVSKI
Sbjct:    1 MSRTKFERKKPHVNIGTIGHVDHGKTTLTAAISATLASSSGSKAKKFDEIDAAPEEKARGITINTSHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKEDQVDDPELLELVELEVRELLSNYDFPSEEIPFVCGSALLALETLTKSPNLKRGENKWVDKIYELMDAVDDYIPTPQRDMDKPFLMAIEDVFSITGRGTVATGRIERGQIKVGDTIELVGLKNTKTTTITGLEMFQKTLEEGIAGDNVGILLRGIQKDDIERGMVLAKPGTITPHTKFEAEVYILKKEEGGRHTPFFSGYRPQFYVRTTDVTGTITSFTSDEGETVEMVMPGDRIKMNVELINPIAIEQGMRFAIREGGKTIGAGVVSKI 407          
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Match: A0A1X9PTY9_9RHOD (Elongation factor Tu, chloroplastic n=2 Tax=Rhodellaceae TaxID=661029 RepID=A0A1X9PTY9_9RHOD)

HSP 1 Score: 692 bits (1787), Expect = 9.160e-250
Identity = 339/409 (82.89%), Postives = 375/409 (91.69%), Query Frame = 1
Query:    1 MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDIDAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELVELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIYNLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVGETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERGMVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGKILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIGAGVVSKINK 1227
            MAR KFER K H+NIGTIGHVDHGKTTLTAAI+A LS      AKK+++ID+APEE+ARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP +VVFLNKEDQVDD+ELLELVELEVRELLSNYDFPGDDIPIV+GSAL ALEA+ K P ++KGE+KW+DKI++LMD+VD YIPTP RD+DK+FLMA+EDVFSITGRGTVATGRIERGIVKVGET+E+VGL DT+ TT+TG+EMFQKTLDEG+AGDN+GILLRGVQK +IERGMVLSKPGTITPH  FE+EVY+L KEEGGRHTPFFSGYRPQFYVRTTDVTG I  FT+DDG   EMVMPGDRIKM A LI+ IAIE+GMRFAIREGGRTIGAGVVSKI K
Sbjct:    1 MARAKFERKKTHVNIGTIGHVDHGKTTLTAAISATLSTVSGQSAKKFDEIDSAPEEKARGITINTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPTLVVFLNKEDQVDDVELLELVELEVRELLSNYDFPGDDIPIVSGSALLALEAVIKNPSIQKGEDKWVDKIFSLMDAVDDYIPTPERDVDKTFLMAVEDVFSITGRGTVATGRIERGIVKVGETIEIVGLRDTQTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKTQIERGMVLSKPGTITPHTEFEAEVYVLNKEEGGRHTPFFSGYRPQFYVRTTDVTGTINQFTADDGTTAEMVMPGDRIKMTASLINPIAIEQGMRFAIREGGRTIGAGVVSKILK 409          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1670.4524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPC8_9STRA3.380e-26889.68Elongation factor Tu, chloroplastic n=2 Tax=Strame... [more]
A0A516ZAG0_9STRA1.490e-25585.50Elongation factor Tu, chloroplastic n=4 Tax=Dictyo... [more]
B2XTC8_HETAK2.770e-25385.01Elongation factor Tu, chloroplastic n=4 Tax=Hetero... [more]
C6KIM9_AURAN3.350e-25284.52Elongation factor Tu, chloroplastic n=4 Tax=Pelago... [more]
A0A6P1AKF6_9CYAN6.750e-25283.37Elongation factor Tu n=1 Tax=Kamptonema sp. SIO1D9... [more]
EFTU_THAPS2.750e-25184.11Elongation factor Tu, chloroplastic n=94 Tax=Sar T... [more]
K9ZWB2_9STRA3.900e-25183.78Elongation factor Tu, chloroplastic n=24 Tax=Ochro... [more]
B7T1V7_VAULI1.650e-25084.80Elongation factor Tu, chloroplastic n=1 Tax=Vauche... [more]
A0A7C3UYJ0_9BACT4.540e-25083.54Elongation factor Tu n=3 Tax=cellular organisms Ta... [more]
A0A1X9PTY9_9RHOD9.160e-25082.89Elongation factor Tu, chloroplastic n=2 Tax=Rhodel... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1670contigL-elsbetiae_contig1670:8958..10187 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score734.9
Seed ortholog evalue2e-209
Seed eggNOG ortholog2880.D1J725
Preferred nametufA
KEGG koko:K02358
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0009295,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009941,GO:0016020,GO:0020011,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031981,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048046,GO:0055035,GO:0070013
EggNOG free text desc.translation elongation factor activity
EggNOG OGsCOG0050@1,KOG0460@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029,ko04147
Exons1
Model size1230
Cds size1230
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.423695-CDS-L-elsbetiae_contig1670:8957..101871622815694.423695-CDS-L-elsbetiae_contig1670:8957..10187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1670 8958..10187 -
1691683042.7997499-CDS-L-elsbetiae_contig1670:8957..101871691683042.7997499-CDS-L-elsbetiae_contig1670:8957..10187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1670 8958..10187 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1670.4524.1prot_L-elsbetiae_contig1670.4524.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1670 8958..10187 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1670.4524.1

>prot_L-elsbetiae_contig1670.4524.1 ID=prot_L-elsbetiae_contig1670.4524.1|Name=mRNA_L-elsbetiae_contig1670.4524.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=410bp
MAREKFERTKPHINIGTIGHVDHGKTTLTAAITAVLSLTGDSKAKKYEDI
DAAPEERARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAAQMD
GAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLELLELV
ELEVRELLSNYDFPGDDIPIVAGSALQALEALSKEPGLKKGENKWIDKIY
NLMDSVDAYIPTPVRDIDKSFLMAIEDVFSITGRGTVATGRIERGIVKVG
ETVELVGLGDTKATTVTGVEMFQKTLDEGVAGDNVGILLRGVQKNEIERG
MVLSKPGTITPHNIFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTG
KILSFTSDDGNNVEMVMPGDRIKMNAELISSIAIEEGMRFAIREGGRTIG
AGVVSKINK*
back to top

mRNA from alignment at L-elsbetiae_contig1670:8958..10187-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1670.4524.1 ID=mRNA_L-elsbetiae_contig1670.4524.1|Name=mRNA_L-elsbetiae_contig1670.4524.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig1670:8958..10187- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCACGTGAAAAATTTGAGCGTACAAAACCCCATATCAATATTGGAAC AATTGGTCATGTAGATCATGGTAAAACAACTTTAACCGCTGCTATAACAG CTGTTTTATCATTAACCGGTGATTCTAAAGCAAAAAAATATGAAGATATC GATGCAGCTCCGGAAGAACGTGCACGTGGAATTACAATAAATACTGCCCA TGTAGAATATGAAACAGATGTACGTCATTATGCTCATGTGGATTGTCCTG GTCATGCTGATTATGTTAAAAATATGATCACAGGAGCAGCTCAAATGGAT GGAGCAATTTTAGTTGTTTCTGCTGCTGATGGACCAATGCCCCAAACTCG TGAACATATTTTATTATCGAAACAAGTTGGTGTTCCTCATATTGTTGTTT TTTTAAATAAAGAAGATCAAGTAGATGATCTTGAATTATTAGAATTAGTG GAATTAGAAGTACGAGAATTATTATCAAATTATGATTTTCCTGGAGATGA TATACCTATTGTAGCAGGTTCAGCTCTTCAAGCTTTAGAAGCATTATCAA AAGAACCTGGTTTAAAAAAAGGTGAAAATAAATGGATTGATAAAATTTAT AATTTAATGGATTCAGTGGATGCTTATATTCCGACTCCAGTTCGTGATAT TGATAAATCTTTTTTAATGGCTATTGAAGATGTTTTTTCAATTACTGGTC GTGGAACAGTAGCTACAGGAAGAATTGAACGTGGTATTGTTAAAGTAGGA GAAACAGTTGAATTAGTTGGTTTAGGTGATACAAAAGCAACAACAGTTAC TGGAGTAGAAATGTTTCAAAAAACTTTAGATGAAGGAGTTGCAGGTGATA ATGTTGGTATTTTACTACGTGGTGTTCAAAAAAATGAAATAGAACGTGGT ATGGTTTTATCTAAACCTGGTACTATAACACCTCATAATATTTTCGAATC AGAAGTTTATATCTTAACTAAAGAAGAAGGTGGACGTCATACACCTTTCT TTTCAGGTTATAGACCTCAATTTTATGTACGAACAACAGATGTAACTGGT AAAATTTTAAGTTTTACTTCAGATGATGGAAATAATGTTGAAATGGTTAT GCCTGGGGACCGTATTAAGATGAATGCAGAACTTATCTCATCTATTGCAA TTGAAGAAGGAATGCGATTTGCTATTCGTGAAGGTGGACGTACAATTGGG GCTGGAGTTGTTTCTAAAATTAATAAATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1670:8958..10187-

>mRNA_L-elsbetiae_contig1670.4524.1 ID=mRNA_L-elsbetiae_contig1670.4524.1|Name=mRNA_L-elsbetiae_contig1670.4524.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2460bp|location=Sequence derived from alignment at L-elsbetiae_contig1670:8958..10187- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCACGTGAAAAATTTGAGCGTACAAAACCCCATATCAATATTGGAAC
AATTGGTCATGTAGATCATGGTAAAACAACTTTAACCGCTGCTATAACAG
CTGTTTTATCATTAACCGGTGATTCTAAAGCAAAAAAATATGAAGATATC
GATGCAGCTCCGGAAGAACGTGCACGTGGAATTACAATAAATACTGCCCA
TGTAGAATATGAAACAGATGTACGTCATTATGCTCATGTGGATTGTCCTG
GTCATGCTGATTATGTTAAAAATATGATCACAGGAGCAGCTCAAATGGAT
GGAGCAATTTTAGTTGTTTCTGCTGCTGATGGACCAATGCCCCAAACTCG
TGAACATATTTTATTATCGAAACAAGTTGGTGTTCCTCATATTGTTGTTT
TTTTAAATAAAGAAGATCAAGTAGATGATCTTGAATTATTAGAATTAGTG
GAATTAGAAGTACGAGAATTATTATCAAATTATGATTTTCCTGGAGATGA
TATACCTATTGTAGCAGGTTCAGCTCTTCAAGCTTTAGAAGCATTATCAA
AAGAACCTGGTTTAAAAAAAGGTGAAAATAAATGGATTGATAAAATTTAT
AATTTAATGGATTCAGTGGATGCTTATATTCCGACTCCAGTTCGTGATAT
TGATAAATCTTTTTTAATGGCTATTGAAGATGTTTTTTCAATTACTGGTC
GTGGAACAGTAGCTACAGGAAGAATTGAACGTGGTATTGTTAAAGTAGGA
GAAACAGTTGAATTAGTTGGTTTAGGTGATACAAAAGCAACAACAGTTAC
TGGAGTAGAAATGTTTCAAAAAACTTTAGATGAAGGAGTTGCAGGTGATA
ATGTTGGTATTTTACTACGTGGTGTTCAAAAAAATGAAATAGAACGTGGT
ATGGTTTTATCTAAACCTGGTACTATAACACCTCATAATATTTTCGAATC
AGAAGTTTATATCTTAACTAAAGAAGAAGGTGGACGTCATACACCTTTCT
TTTCAGGTTATAGACCTCAATTTTATGTACGAACAACAGATGTAACTGGT
AAAATTTTAAGTTTTACTTCAGATGATGGAAATAATGTTGAAATGGTTAT
GCCTGGGGACCGTATTAAGATGAATGCAGAACTTATCTCATCTATTGCAA
TTGAAGAAGGAATGCGATTTGCTATTCGTGAAGGTGGACGTACAATTGGG
GCTGGAGTTGTTTCTAAAATTAATAAATAAATGGCACGTGAAAAATTTGA
GCGTACAAAACCCCATATCAATATTGGAACAATTGGTCATGTAGATCATG
GTAAAACAACTTTAACCGCTGCTATAACAGCTGTTTTATCATTAACCGGT
GATTCTAAAGCAAAAAAATATGAAGATATCGATGCAGCTCCGGAAGAACG
TGCACGTGGAATTACAATAAATACTGCCCATGTAGAATATGAAACAGATG
TACGTCATTATGCTCATGTGGATTGTCCTGGTCATGCTGATTATGTTAAA
AATATGATCACAGGAGCAGCTCAAATGGATGGAGCAATTTTAGTTGTTTC
TGCTGCTGATGGACCAATGCCCCAAACTCGTGAACATATTTTATTATCGA
AACAAGTTGGTGTTCCTCATATTGTTGTTTTTTTAAATAAAGAAGATCAA
GTAGATGATCTTGAATTATTAGAATTAGTGGAATTAGAAGTACGAGAATT
ATTATCAAATTATGATTTTCCTGGAGATGATATACCTATTGTAGCAGGTT
CAGCTCTTCAAGCTTTAGAAGCATTATCAAAAGAACCTGGTTTAAAAAAA
GGTGAAAATAAATGGATTGATAAAATTTATAATTTAATGGATTCAGTGGA
TGCTTATATTCCGACTCCAGTTCGTGATATTGATAAATCTTTTTTAATGG
CTATTGAAGATGTTTTTTCAATTACTGGTCGTGGAACAGTAGCTACAGGA
AGAATTGAACGTGGTATTGTTAAAGTAGGAGAAACAGTTGAATTAGTTGG
TTTAGGTGATACAAAAGCAACAACAGTTACTGGAGTAGAAATGTTTCAAA
AAACTTTAGATGAAGGAGTTGCAGGTGATAATGTTGGTATTTTACTACGT
GGTGTTCAAAAAAATGAAATAGAACGTGGTATGGTTTTATCTAAACCTGG
TACTATAACACCTCATAATATTTTCGAATCAGAAGTTTATATCTTAACTA
AAGAAGAAGGTGGACGTCATACACCTTTCTTTTCAGGTTATAGACCTCAA
TTTTATGTACGAACAACAGATGTAACTGGTAAAATTTTAAGTTTTACTTC
AGATGATGGAAATAATGTTGAAATGGTTATGCCTGGGGACCGTATTAAGA
TGAATGCAGAACTTATCTCATCTATTGCAATTGAAGAAGGAATGCGATTT
GCTATTCGTGAAGGTGGACGTACAATTGGGGCTGGAGTTGTTTCTAAAAT
TAATAAATAA
back to top