mRNA_L-elsbetiae_contig16696.4512.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16696.4512.1
Unique NamemRNA_L-elsbetiae_contig16696.4512.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: RLMD_ALTNA (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=13 Tax=Proteobacteria TaxID=1224 RepID=RLMD_ALTNA)

HSP 1 Score: 480 bits (1235), Expect = 1.700e-167
Identity = 237/253 (93.68%), Postives = 248/253 (98.02%), Query Frame = 1
Query:    1 VAIFYKPSKGKNKSNVKGRVRGAGSGEKQHIVKTKQSWPSVDDINAANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            +AIFYKPSKGKNKSNVKGRVRGAGSGEKQHIVKTKQSWPSVDDINAANEAVTIDGMDWQGQGVARG+TLYFVDGALP ET++IKALSSNKQI+NAKVTKVNTPS HRQKPFCGVANQCGGCQLQHVEPQ ALALRDDALKSM QRKLGFNEGAWQAP+SG+RPRYRRKARLAIDARNPDKIKLGFRE+AGKNIVDI+GCPVLVE+LSQLIAPLKSAITGYASARLVGH+SLLAGENAVQVTVKHTRSLAND I
Sbjct:    1 MAIFYKPSKGKNKSNVKGRVRGAGSGEKQHIVKTKQSWPSVDDINAANEAVTIDGMDWQGQGVARGDTLYFVDGALPGETVEIKALSSNKQIVNAKVTKVNTPSEHRQKPFCGVANQCGGCQLQHVEPQEALALRDDALKSMFQRKLGFNEGAWQAPVSGNRPRYRRKARLAIDARNPDKIKLGFRENAGKNIVDIEGCPVLVESLSQLIAPLKSAITGYASARLVGHVSLLAGENAVQVTVKHTRSLANDFI 253          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: A0A7X5LHU8_9ALTE (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alteromonas profundi TaxID=2696062 RepID=A0A7X5LHU8_9ALTE)

HSP 1 Score: 259 bits (663), Expect = 2.330e-81
Identity = 122/215 (56.74%), Postives = 159/215 (73.95%), Query Frame = 1
Query:  115 PSVDDINAANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            P  D  N A   VTID +DW+GQGVA+G+T++FV GALP ET+ IK  +SNK++ +A   +V+ PS HR KPFC VA++CGGCQLQH+E + AL+ R+ A+K MLQR+L F + AW  PISG RP YRRKARLA+DAR P+K K GFRE  GK +VDI  CPVL+  LS LIAPLK  +  + + R +GH+SLLAG+N  QVT+KHT++LA+  +
Sbjct:    7 PKGDSNNKAAAPVTIDSLDWKGQGVAKGKTMHFVSGALPGETVAIKVTNSNKKVRSAHAIRVDNPSSHRVKPFCPVASRCGGCQLQHIESEAALSFRNLAIKEMLQRQLKFADEAWHTPISGPRPAYRRKARLALDARQPEKFKCGFREQQGKAVVDIHQCPVLLPTLSNLIAPLKKVLNSHENKRFLGHVSLLAGDNVAQVTIKHTQTLASQYV 221          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: RLMD_ALTMD (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=9 Tax=Alteromonas mediterranea TaxID=314275 RepID=RLMD_ALTMD)

HSP 1 Score: 260 bits (665), Expect = 3.580e-81
Identity = 132/262 (50.38%), Postives = 173/262 (66.03%), Query Frame = 1
Query:    1 VAIFYKPSKGKNKS---------NVKGRVRGAGSGEKQHIVKTKQSWPSVDDINAANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            +A  +K S+ K K+         + KG  R           K+KQS       +A N A+TI  +DW GQGVARG T+YFV+GALP ET  I+ +SS K++++AK   +  PS  RQ PFC V   CGGCQLQH++   ALA RD+ALK M++R+L    G WQAP+ G RP+YRRKARLAIDARNPD IKLGFRE+    +V++D CP+LV  LS  I PL++A+ GY SAR +GHISL+AG+N  QV +KHT++L + LI
Sbjct:    1 MANLFKQSRAKQKNKTTPSQTQTSTKGSARANAQVAGLRFKKSKQSKEHNTAQDANNNAITIQELDWMGQGVARGATMYFVEGALPGETCDIEVVSSKKKVVSAKTISIQGPSELRQPPFCPVFEACGGCQLQHIDADAALAYRDNALKIMMERQLSIGSGVWQAPLVGPRPQYRRKARLAIDARNPDNIKLGFREANSNKVVNLDTCPILVNPLSTAIGPLRNALEGYDSARHIGHISLIAGDNRAQVVIKHTKALEDALI 262          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: A0A136I170_9ALTE (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=2 Tax=unclassified Alteromonas TaxID=2614992 RepID=A0A136I170_9ALTE)

HSP 1 Score: 251 bits (641), Expect = 2.820e-77
Identity = 115/205 (56.10%), Postives = 153/205 (74.63%), Query Frame = 1
Query:  145 EAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            + VTID +DW GQGV RG  +YFV+GALP+E  +I+  S  KQ++  KVT+V TPS  R  PFC +   CGGCQLQH++P  AL  RD+ALK+M+Q++LG  + AWQ P+ G+RP+YRRKARLAIDARNPDK+KLGFR +    +V+I  CP+LV+ LS LI PL  AI G+ SA+ +GHI L+AG++  QVTVKHT++L + L+
Sbjct:   73 KTVTIDSLDWMGQGVVRGNPMYFVEGALPNEVCEIEETSRKKQVVQGKVTRVVTPSNTRVAPFCSMFRTCGGCQLQHIDPATALEYRDNALKTMMQKQLGMQDAAWQLPLVGERPQYRRKARLAIDARNPDKVKLGFRAANSNKVVNITACPILVDPLSALINPLHEAIEGFDSAKFIGHIVLIAGDDRAQVTVKHTKNLESSLL 277          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: UPI0018E86854 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alteromonas sp. IB21 TaxID=2779369 RepID=UPI0018E86854)

HSP 1 Score: 248 bits (634), Expect = 1.740e-76
Identity = 116/205 (56.59%), Postives = 152/205 (74.15%), Query Frame = 1
Query:  145 EAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            + VTID +DW G GV RG  + FV+GAL  ET  I+ LSS K +INAK  K++TPS  RQ PFC V + CGGCQLQH++P  ALA RD ALK M++R+L      WQ+P+ G RP+YRRKARLAIDARNPD+IKLGFR S+   +V+++ CP+LV+ LS LI PL+ A+TG+ SAR +GHISL+AG+N   + +KHT++L  +LI
Sbjct:   56 DTVTIDDLDWMGNGVVRGNPMLFVEGALVGETCDIEVLSSKKNVINAKAKKIHTPSEARQAPFCSVFDACGGCQLQHIKPDAALAQRDLALKVMMERQLSMKSDVWQSPLVGPRPQYRRKARLAIDARNPDQIKLGFRGSSSNKVVNVETCPILVDPLSTLIGPLRDALTGFESARHIGHISLIAGDNTSHLVLKHTKALEAELI 260          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: A0A6T9XY16_ALTMA (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=3 Tax=Alteromonas TaxID=226 RepID=A0A6T9XY16_ALTMA)

HSP 1 Score: 247 bits (630), Expect = 1.330e-75
Identity = 125/262 (47.71%), Postives = 172/262 (65.65%), Query Frame = 1
Query:    1 VAIFYKPSKGKNKSNVKGRVRGAG-----SGEKQ----HIVKTKQSWPSVDDINAANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            +A  +K S+ K K     R+ G G     S   Q       KTK +  +    N++   VTI+ +DW G GV RG  + FV+GAL  ET  I+ LSS K++INAK T +  PS  RQ PFC V + CGGCQLQH++P  AL  RD+ALK M++R+L    G WQ+P+ G RP+YRRKARLAIDARNP++IKLGFRE+    + ++D CP+LV+ LS +I PL++A+TG+ SAR +GHISL+AG+N   + +KH ++L  +LI
Sbjct:   27 LANLFKQSRSKQKGTASSRLSGNGKKGNASANAQVAGLRFGKTKNASQASKKANSST--VTIEDVDWMGHGVVRGNPIMFVEGALVGETCDIEVLSSKKKVINAKATNIQLPSEARQAPFCPVFDSCGGCQLQHIKPDTALEQRDNALKVMMERQLAMKAGVWQSPLVGPRPQYRRKARLAIDARNPNQIKLGFREANSNKVTNVDSCPILVDPLSNIIGPLQNALTGFESARHIGHISLIAGDNTSHLVIKHIKALEAELI 286          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: A0A640QHN1_9ALTE (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=2 Tax=Alteromonas TaxID=226 RepID=A0A640QHN1_9ALTE)

HSP 1 Score: 244 bits (624), Expect = 5.440e-75
Identity = 115/207 (55.56%), Postives = 153/207 (73.91%), Query Frame = 1
Query:  139 ANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            A + VTID +DW G GVARG  + FV+GAL  ET  I+ALSS K++INAK  K++ PS  RQ PFC V + CGGCQLQH++P  ALA RD ALK M++R L      WQA + G RP+YRRKARLAIDARNP+ IKLGFRE+   N+++++ CP+LV+ LS +I PL+ A+TG+ SAR +GH+SL+AG+N   + +KHT++L  +LI
Sbjct:   54 AIDTVTIDDLDWMGNGVARGNPMVFVEGALVGETCDIEALSSKKKVINAKAKKIHAPSEVRQVPFCPVFDACGGCQLQHIKPDAALAQRDLALKVMMERHLAMKPHVWQASLEGPRPQYRRKARLAIDARNPNLIKLGFREANSNNVINVETCPILVDPLSTIIGPLRDALTGFESARHIGHVSLVAGDNTSHLVIKHTKALEAELI 260          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: K0CXC7_ALTMS (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=30 Tax=Alteromonadaceae TaxID=72275 RepID=K0CXC7_ALTMS)

HSP 1 Score: 244 bits (622), Expect = 1.080e-74
Identity = 110/203 (54.19%), Postives = 153/203 (75.37%), Query Frame = 1
Query:  151 VTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            VTI+ +DW G GV RG  + FV+GAL  ET  I+ +SS K++INAK T +++PS  RQ PFC V + CGGCQLQH++P  AL  RD AL+ M++R L      WQAP++G RP+YRRKARLAIDARNP++IKLGFRE+   N+++++ CP+LV+ LS+LI PL+ A++G+ SAR +GHISL+AG+N   + +KHT++L  +LI
Sbjct:   58 VTIEDLDWMGNGVVRGNPMVFVEGALVGETCDIEVVSSKKKVINAKATNIHSPSDERQAPFCPVFDACGGCQLQHIKPDAALVQRDRALRVMMERHLAMKPNVWQAPLAGPRPQYRRKARLAIDARNPNQIKLGFREANSSNVINVETCPILVDPLSKLIGPLRDALSGFESARHIGHISLIAGDNTSHLVIKHTKALEAELI 260          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: A0A6N9TQE5_9ALTE (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=4 Tax=Alteromonas TaxID=226 RepID=A0A6N9TQE5_9ALTE)

HSP 1 Score: 243 bits (620), Expect = 1.540e-74
Identity = 112/208 (53.85%), Postives = 151/208 (72.60%), Query Frame = 1
Query:  133 NAANEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDL 756
            N A   + I+ +DW GQG+AR   ++FV+GALP ET  +  L + K ++NAK T +  PS  R  PFC V +QCGGCQLQH++ Q AL  R++ALKSM+ R+L   +G WQAP++GD+P YRRKARLA+DAR  DK+KLGFR  A  +IVDI  CPVLV+ LS+LIAPL++ ++   S R +GHI LLAG+N  QVT+KHT++L+ +L
Sbjct:   48 NQAQSPLLIESLDWMGQGIARATPVHFVEGALPGETCDVSVLHAKKNVVNAKATTITHPSSMRATPFCPVFDQCGGCQLQHIDAQHALTERNNALKSMMVRQLAMEDGVWQAPLAGDKPAYRRKARLALDARRTDKLKLGFRSQASSDIVDITSCPVLVDELSRLIAPLRAVLSRCESTRFIGHIGLLAGDNVCQVTIKHTKALSPEL 255          
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Match: UPI00044EB331 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alteromonas sp. ALT199 TaxID=1298865 RepID=UPI00044EB331)

HSP 1 Score: 243 bits (620), Expect = 2.160e-74
Identity = 110/206 (53.40%), Postives = 153/206 (74.27%), Query Frame = 1
Query:  142 NEAVTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKVNTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFNEGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCPVLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLANDLI 759
            +  VTI+ +DW G GV RG  + FVDGAL  ET  I+ L+S K++INAK   +++PS  RQ PFC V + CGGCQLQH++P  AL LRD+ALK M++R+L      WQAP+ G RP+YRRKARLAIDARNP++IKLGFRE+   N+V ++ CP+LV+ LS +I PL++A+TG+ +AR +GH+SL+AG+    + +KHT++L  +LI
Sbjct:   55 SNTVTIEDIDWMGHGVVRGNPMMFVDGALVGETCDIEVLTSKKKVINAKAINIHSPSNARQAPFCPVFDSCGGCQLQHIQPDAALKLRDNALKVMMERQLAMKADVWQAPLVGPRPQYRRKARLAIDARNPNQIKLGFREANSSNVVSVETCPILVDPLSNIIGPLRNALTGFETARHIGHVSLIAGDKISHLVIKHTKALEAELI 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16696.4512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RLMD_ALTNA1.700e-16793.6823S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A7X5LHU8_9ALTE2.330e-8156.7423S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
RLMD_ALTMD3.580e-8150.3823S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A136I170_9ALTE2.820e-7756.1023S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
UPI0018E868541.740e-7656.5923S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A6T9XY16_ALTMA1.330e-7547.7123S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A640QHN1_9ALTE5.440e-7555.5623S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
K0CXC7_ALTMS1.080e-7454.1923S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A6N9TQE5_9ALTE1.540e-7453.8523S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
UPI00044EB3312.160e-7453.4023S rRNA (uracil(1939)-C(5))-methyltransferase Rlm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16696contigL-elsbetiae_contig16696:1..759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score480.7
Seed ortholog evalue4.2e-133
Seed eggNOG ortholog715451.ambt_14740
Preferred namerlmD
KEGG koko:K03215
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070041,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
EggNOG free text desc.Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA
EggNOG OGs1MV3A@1224,1RN1D@1236,464C5@72275,COG2265@1,COG2265@2
EC2.1.1.190
COG Functional cat.J
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons1
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815693.163059-CDS-L-elsbetiae_contig16696:0..7591622815693.163059-CDS-L-elsbetiae_contig16696:0..759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16696 1..759 -
1691683041.957414-CDS-L-elsbetiae_contig16696:0..7591691683041.957414-CDS-L-elsbetiae_contig16696:0..759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16696 1..759 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16696.4512.1prot_L-elsbetiae_contig16696.4512.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16696 1..759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16696.4512.1

>prot_L-elsbetiae_contig16696.4512.1 ID=prot_L-elsbetiae_contig16696.4512.1|Name=mRNA_L-elsbetiae_contig16696.4512.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
VAIFYKPSKGKNKSNVKGRVRGAGSGEKQHIVKTKQSWPSVDDINAANEA
VTIDGMDWQGQGVARGETLYFVDGALPDETIQIKALSSNKQIINAKVTKV
NTPSVHRQKPFCGVANQCGGCQLQHVEPQVALALRDDALKSMLQRKLGFN
EGAWQAPISGDRPRYRRKARLAIDARNPDKIKLGFRESAGKNIVDIDGCP
VLVEALSQLIAPLKSAITGYASARLVGHISLLAGENAVQVTVKHTRSLAN
DLI
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mRNA from alignment at L-elsbetiae_contig16696:1..759-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16696.4512.1 ID=mRNA_L-elsbetiae_contig16696.4512.1|Name=mRNA_L-elsbetiae_contig16696.4512.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=759bp|location=Sequence derived from alignment at L-elsbetiae_contig16696:1..759- (Laminarionema elsbetiae ELsaHSoW15)
GTGGCCATATTTTATAAACCGAGCAAAGGCAAAAACAAAAGCAATGTGAA AGGACGAGTGCGCGGCGCAGGCTCGGGCGAAAAGCAGCACATTGTAAAAA CCAAACAATCTTGGCCCTCGGTTGATGACATCAATGCAGCCAATGAAGCG GTAACTATTGATGGCATGGATTGGCAGGGGCAGGGTGTTGCTCGAGGTGA AACCTTATATTTTGTTGATGGTGCATTACCTGATGAAACCATACAAATAA AAGCGCTTTCAAGCAACAAACAGATTATTAACGCAAAAGTCACTAAAGTG AATACACCCTCAGTACACCGCCAAAAACCGTTTTGCGGGGTGGCAAATCA GTGCGGTGGTTGTCAGCTTCAGCACGTAGAGCCTCAAGTAGCCCTGGCAC TACGAGACGATGCGCTTAAAAGTATGCTCCAGCGTAAACTCGGTTTCAAC GAGGGGGCATGGCAAGCGCCCATCAGCGGCGACAGGCCACGCTATCGCCG TAAAGCCCGCCTAGCAATTGATGCAAGAAACCCAGATAAAATAAAACTTG GCTTTCGAGAAAGTGCGGGCAAAAACATTGTTGATATCGATGGTTGCCCG GTTTTGGTTGAGGCGCTAAGTCAGCTTATTGCGCCACTTAAATCTGCCAT TACAGGCTACGCAAGCGCTCGCCTTGTTGGGCATATCAGCTTATTGGCGG GGGAAAATGCGGTGCAAGTTACTGTGAAGCATACCCGTTCTCTAGCCAAC GACTTGATT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16696:1..759-

>mRNA_L-elsbetiae_contig16696.4512.1 ID=mRNA_L-elsbetiae_contig16696.4512.1|Name=mRNA_L-elsbetiae_contig16696.4512.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig16696:1..759- (Laminarionema elsbetiae ELsaHSoW15)
GTGGCCATATTTTATAAACCGAGCAAAGGCAAAAACAAAAGCAATGTGAA
AGGACGAGTGCGCGGCGCAGGCTCGGGCGAAAAGCAGCACATTGTAAAAA
CCAAACAATCTTGGCCCTCGGTTGATGACATCAATGCAGCCAATGAAGCG
GTAACTATTGATGGCATGGATTGGCAGGGGCAGGGTGTTGCTCGAGGTGA
AACCTTATATTTTGTTGATGGTGCATTACCTGATGAAACCATACAAATAA
AAGCGCTTTCAAGCAACAAACAGATTATTAACGCAAAAGTCACTAAAGTG
AATACACCCTCAGTACACCGCCAAAAACCGTTTTGCGGGGTGGCAAATCA
GTGCGGTGGTTGTCAGCTTCAGCACGTAGAGCCTCAAGTAGCCCTGGCAC
TACGAGACGATGCGCTTAAAAGTATGCTCCAGCGTAAACTCGGTTTCAAC
GAGGGGGCATGGCAAGCGCCCATCAGCGGCGACAGGCCACGCTATCGCCG
TAAAGCCCGCCTAGCAATTGATGCAAGAAACCCAGATAAAATAAAACTTG
GCTTTCGAGAAAGTGCGGGCAAAAACATTGTTGATATCGATGGTTGCCCG
GTTTTGGTTGAGGCGCTAAGTCAGCTTATTGCGCCACTTAAATCTGCCAT
TACAGGCTACGCAAGCGCTCGCCTTGTTGGGCATATCAGCTTATTGGCGG
GGGAAAATGCGGTGCAAGTTACTGTGAAGCATACCCGTTCTCTAGCCAAC
GACTTGATTGTGGCCATATTTTATAAACCGAGCAAAGGCAAAAACAAAAG
CAATGTGAAAGGACGAGTGCGCGGCGCAGGCTCGGGCGAAAAGCAGCACA
TTGTAAAAACCAAACAATCTTGGCCCTCGGTTGATGACATCAATGCAGCC
AATGAAGCGGTAACTATTGATGGCATGGATTGGCAGGGGCAGGGTGTTGC
TCGAGGTGAAACCTTATATTTTGTTGATGGTGCATTACCTGATGAAACCA
TACAAATAAAAGCGCTTTCAAGCAACAAACAGATTATTAACGCAAAAGTC
ACTAAAGTGAATACACCCTCAGTACACCGCCAAAAACCGTTTTGCGGGGT
GGCAAATCAGTGCGGTGGTTGTCAGCTTCAGCACGTAGAGCCTCAAGTAG
CCCTGGCACTACGAGACGATGCGCTTAAAAGTATGCTCCAGCGTAAACTC
GGTTTCAACGAGGGGGCATGGCAAGCGCCCATCAGCGGCGACAGGCCACG
CTATCGCCGTAAAGCCCGCCTAGCAATTGATGCAAGAAACCCAGATAAAA
TAAAACTTGGCTTTCGAGAAAGTGCGGGCAAAAACATTGTTGATATCGAT
GGTTGCCCGGTTTTGGTTGAGGCGCTAAGTCAGCTTATTGCGCCACTTAA
ATCTGCCATTACAGGCTACGCAAGCGCTCGCCTTGTTGGGCATATCAGCT
TATTGGCGGGGGAAAATGCGGTGCAAGTTACTGTGAAGCATACCCGTTCT
CTAGCCAACGACTTGATT
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