mRNA_L-elsbetiae_contig16682.4506.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: A0A6H5JM62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM62_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.690e-51 Identity = 81/138 (58.70%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 37 KVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQPTSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 KV VIAQ WGDEY+HF EALPRITLMLD+L ++LDIK+A++AP+P S+ + TY+ + L LLG+ +RVIFIQ IHADLAI+ SS PC PD + N+LR LL+A+YP + G+P PRPV++L+VR S RWL+N+ Sbjct: 6 KVVVIAQYWGDEYYHFLVEALPRITLMLDVLVENLDIKVAVHAPKPGSESHTTYIYELLALLGIESERVIFIQTEIHADLAILPSSTPCGRPDTQMVNMLRSVLLKAMYPRTRGIPPQVPRPVIVLVVRESRRWLKNN 143
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D7FK32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK32_ECTSI) HSP 1 Score: 176 bits (447), Expect = 4.960e-51 Identity = 83/147 (56.46%), Postives = 113/147 (76.87%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQPTSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 LPT+ + +EKV VIAQ WGDEY+HF EALPRITLMLD+L ++LDIK+A++AP+ S+ + T++ + L LLG+ +RVIFIQ IHADLAI+ SS PC PD + N+LR LL+A+YP + G+P PRPV++L+VR S RWL+N+ Sbjct: 143 LPTSAERHEKVVVIAQYWGDEYYHFLVEALPRITLMLDVLVENLDIKVAVHAPKLGSESHTTFIYELLALLGIDSERVIFIQTEIHADLAILPSSIPCGRPDTQMVNMLRSVLLKAMYPRTQGIPPEVPRPVIVLVVRESRRWLKNN 289
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D8LB14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB14_ECTSI) HSP 1 Score: 152 bits (383), Expect = 8.980e-40 Identity = 74/147 (50.34%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 7 SLPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQPTSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRN 447 SLP N ++KVFVI Q WGD YFHF +E LPR+TLMLD+L + +IKIA++AP PT D K Y + + LLG++++R+IF+ IHADLAI+ S C P+ N+LR LL+ +YPSS GVP P RP +++VR LRN Sbjct: 558 SLPRNAPRHDKVFVITQHWGDAYFHFLSECLPRVTLMLDVLLANSEIKIAVHAPPPTWSDRKHYTSELMALLGIQEERLIFVDTEIHADLAILPESTACETPNTAMVNMLRSALLKGMYPSSAGVPPPVTRPPTLVLVRQKEGGLRN 704
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D8LIQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ4_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.600e-35 Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQP-----TSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 +P+ K YEKVFV+ Q WG Y+HF E LPRITL LDIL ++ DI IA++ TS + + +M F E+LG+ ++R+I ++ IHADL I+ ++ C +PDA N+LR+ LQ L+P++ GVP PPRPV++L+VR +LR L+N+ Sbjct: 219 IPSYVKRYEKVFVMTQDWGPNYYHFTVEHLPRITLALDILLRNPDIMIAVHFHDTDHWHDTSTELEAHMGMF-EILGISRERIILVKTRIHADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTDGVPPAPPRPVIVLVVRTTLRGLKNN 369
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D7FWK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK4_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.000e-34 Identity = 69/152 (45.39%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAP-----QPTSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 +P +SYEKVFV+AQ WG Y+HF E LPRITL LDIL + DI I + TS +++T+M + EL+G+ ++RV+ +HA+LAI+ ++ C +PD N+LR+ LQ+L+P +GGVP PPRPV++LIVR+++R L N+ Sbjct: 159 VPRYVESYEKVFVMAQEWGPNYYHFTVEHLPRITLALDILIDNPDIMIVMRHHGQDKWHDTSTEFETHM-ELFELIGISRERVVDTSHEVHANLAIVPTTTICGDPDPHMVNMLRNRFLQSLFPDTGGVPPVPPRPVIVLIVRSNIRGLENN 309
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: A0A6H5JZT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT9_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.830e-34 Identity = 69/152 (45.39%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQP-----TSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 +PT K YEKVFV+ Q WG Y+HF E LPRITL LDIL ++ +I IA++ TS + + +M F E+LG+ ++R+I ++ I+ADL I+ ++ C +PDA N+LR+ LQ L+P++ GVP PPRPV++L+VR +LR L+N+ Sbjct: 391 VPTYVKRYEKVFVMTQDWGPNYYHFTVEHLPRITLALDILLENSEIMIAVHYHDTDKWHDTSTELEAHMGMF-EILGISRERIILVKTRIYADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLVVRTTLRGLKNN 541
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: A0A6H5L311_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L311_9PHAE) HSP 1 Score: 134 bits (337), Expect = 9.880e-34 Identity = 67/153 (43.79%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALN------APQPTSKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 LP +P+ Y+KVFV+AQ W Y+HF AE LPRITLMLD+L + DI I+++ + S ++ M + LE+LG+ ++RV+ + + +HA+LAI+ +S C +PD N+LR+ LQ L+P++ GVP PPRP ++L+VR +LR L+N+ Sbjct: 398 LPRDPERYDKVFVMAQEWSPNYYHFTAEHLPRITLMLDVLLDNPDIIISMHFYEKDIIHENISAVHEVQM-EMLEILGISRERVVLVDQQMHANLAIIPTSTVCGDPDPHMVNMLRNRFLQGLFPTTNGVPPAPPRPTIVLVVRTTLRGLQNN 549
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D7FWK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK6_ECTSI) HSP 1 Score: 132 bits (332), Expect = 4.710e-33 Identity = 69/154 (44.81%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQPT-------SKDYKTYMIQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 L +SYEKVFV+ Q W Y+HF E LPRITLMLD+L ++ DI IA++ Q S + +T+M F E+LG+ +DRV+ + +HA+LAI+ +S C +PDA N+LR+ LQ+L+P++ GVP RPV++L+VR +LR L+N+ Sbjct: 382 LQAEDESYEKVFVMTQEWNPNYYHFTVEHLPRITLMLDVLLENPDIMIAMHYSQHDKLHQGGFSNEIETHMEMF-EILGISRDRVVLAMKQMHAELAIVPTSTICGDPDAHMVNMLRNRFLQSLFPTTNGVPPAQARPVIVLVVRTTLRGLKNN 534
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: A0A6H5JTU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTU1_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.200e-32 Identity = 66/152 (43.42%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 10 LPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALNAPQ--PTSKDYKTYM---IQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 LP + +Y+KVFV+ Q W Y+HF E LPRITL LDIL ++ +I I+++ Q P +D ++ LE+LG+ + RV+F+ +HA+LAI+ +S C +PD + N+LR+ LQ L+P++ G+P PPRPV++L+VRN LR L N+ Sbjct: 391 LPRSLLNYDKVFVMTQEWTPNYYHFTVEHLPRITLALDILLENPEIAISMHYYQRDPLHQDISAVQEVQMEMLEILGINRKRVVFVNREMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQGLFPTTNGLPPAPPRPVIVLVVRNKLRGLMNN 542
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Match: D8LIQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ6_ECTSI) HSP 1 Score: 127 bits (319), Expect = 4.750e-32 Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 34 EKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKIALN--APQPTSKDYKTYM---IQFLELLGLRQDRVIFIQEPIHADLAIMSSSAPCFEPDARTTNILRHTLLQALYPSSGGVPFPPPRPVVILIVRNSLRWLRNS 450 E VFV+ Q W Y+HF E LPRITL LDIL ++ +I I+++ P P D ++ LE+LG+ + RV+F+ + +HA+LAI+ +S C +PD + N+LR+ LQ L+P++ GVP PPRPV++LIVRN LR L N+ Sbjct: 159 ENVFVMTQEWTPNYYHFTVEHLPRITLGLDILLENPEIMISMHFYQPDPLHDDISAVQEVQMEMLEILGINRKRVVFVNKEMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLIVRNELRGLMNN 302 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16682.4506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16682.4506.1 >prot_L-elsbetiae_contig16682.4506.1 ID=prot_L-elsbetiae_contig16682.4506.1|Name=mRNA_L-elsbetiae_contig16682.4506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp GTSLPTNPKSYEKVFVIAQCWGDEYFHFFAEALPRITLMLDILRKHLDIKback to top mRNA from alignment at L-elsbetiae_contig16682:1314..3027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16682.4506.1 ID=mRNA_L-elsbetiae_contig16682.4506.1|Name=mRNA_L-elsbetiae_contig16682.4506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1714bp|location=Sequence derived from alignment at L-elsbetiae_contig16682:1314..3027- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16682:1314..3027- >mRNA_L-elsbetiae_contig16682.4506.1 ID=mRNA_L-elsbetiae_contig16682.4506.1|Name=mRNA_L-elsbetiae_contig16682.4506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig16682:1314..3027- (Laminarionema elsbetiae ELsaHSoW15)back to top |