mRNA_L-elsbetiae_contig1660.4466.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: D7FU47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU47_ECTSI) HSP 1 Score: 148 bits (374), Expect = 2.240e-39 Identity = 83/120 (69.17%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 246 MSVTLEEALLLAEVLSRRN--ESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 MS+TLEEALLLAE S+++ G GV A+ GWRAAERSGAL DANVLRAHG RLLVAEKN+GRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS Sbjct: 1 MSITLEEALLLAETASQQSPPRDGEFGVEGPAVTVAAAA--------AASGGWRAAERSGALADANVLRAHGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 112
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A835ZA41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA41_9STRA) HSP 1 Score: 142 bits (358), Expect = 4.580e-32 Identity = 87/172 (50.58%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 84 PEWMHPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 P H L LE AV + KNTA+LLE++ AV+ L GGRVTFCKSGKDRTAMSVTLEE+ +L + ++ G G + AL ANVLRAHG R+ VAEKN+G PLYSFNA+QRQFIPELY+ P QTIQDV+TS RDS Sbjct: 1419 PLVTHMHLLRLEAAVMAQQHNQKNTAVLLESERAVQLLGGGRVTFCKSGKDRTAMSVTLEESFMLLD----KHLDGVGG------------------------------EARALRVANVLRAHGTRIAVAEKNIGSPLYSFNAIQRQFIPELYRAPVQTIQDVLTSFQKRDS 1556
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A1V9ZK10_9STRA (Inositol-3,4-bisphosphate 4-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZK10_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.290e-29 Identity = 81/165 (49.09%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 105 LTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 L L AV+ + A KNT ILLEA AVRR+ GGRVT+CKSGKDRTAMSVTL++A LL + + N A D A E L AN++R HG R++VA+KNVGRP YSFNALQR+ +PE+Y+PP TIQD++TS RDS Sbjct: 983 LDPLMAAVQAENAAAKNTRILLEASDAVRRMNGGRVTYCKSGKDRTAMSVTLDQARLLFKRQASANP-----------------FLVTSPTHAPTDMVSADE----LAAANIMREHGVRIVVAKKNVGRPKYSFNALQRKLLPEIYRPPTSTIQDMVTSVTARDS 1126
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A7S3Y7E2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7E2_HETAK) HSP 1 Score: 117 bits (293), Expect = 2.140e-27 Identity = 74/168 (44.05%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 96 HPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 H L L AV + KN ILLEA+ A RL GGR TFCKSGKDRTAM+ TLE+A+LL + L G G + L AN++RA G RL A KNVGRP YSFN+ QRQF+P +Y+PP + I D+ITS L+RD+ Sbjct: 14 HFLLEGLARAVEAQSTSEKNVDILLEAERAAYRLGGGRCTFCKSGKDRTAMAATLEQAVLLEQHL--------------------------------GPG-AGRDFDAILQRANLMRARGVRLANAHKNVGRPKYSFNSFQRQFMPAIYKPPIEVIDDMITSTLHRDT 148
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A397A4G3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A4G3_9STRA) HSP 1 Score: 124 bits (312), Expect = 4.400e-27 Identity = 77/168 (45.83%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 96 HPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMSVTLE+A LL + +S N G AE A AN++R G R+ +A KNVGR YSFNA+QR+ +P++Y+PP TIQD++TS RDS Sbjct: 339 HLLLDPLMAVVQSENAAAKNTRILLEASDVVRRLRGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLLGATEQLNI--------------------GAEELHA---ANIMREFGIRIEIANKNVGRYKYSFNAIQRKMLPDIYRPPMSTIQDIVTSVTARDS 483
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: T0QHN7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QHN7_SAPDV) HSP 1 Score: 126 bits (316), Expect = 8.310e-27 Identity = 76/165 (46.06%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 105 LTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 L L V+ + A KNT ILLEA AVRR+ GGRVT+CKSGKDRTAMSVTL++A +L + + +N AS + S L AN++R +G R+ VA+KNVGRP YSFN++QR+ +PELY+PP TIQD++TS RDS Sbjct: 994 LDPLMAVVQAENAAAKNTRILLEASDAVRRMNGGRVTYCKSGKDRTAMSVTLDQARVLFKRANVQNP-----------------FLVTSPTHAS----QEMVSSDELAAANLMREYGVRIAVAKKNVGRPKYSFNSIQRKLLPELYRPPTSTIQDMVTSVTARDS 1137
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A7S2UYF4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF4_9STRA) HSP 1 Score: 114 bits (285), Expect = 9.730e-27 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 162 ILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 ILLEA+ +L GGRVTFCKSGKDRTAM++TLE+++LL + L N + V + AN++R HG R+ +AEKNVGRP YSFN LQRQF+P++Y+PP + I D+ITS L RD+ Sbjct: 3 ILLEAENVCYQLGGGRVTFCKSGKDRTAMAITLEQSMLLEQHL---NHTSFESV---------------------------------VDHANLMRIHGTRIAIAEKNVGRPKYSFNNLQRQFMPKIYRPPTEVIDDMITSTLQRDT 112
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A6G0XWA4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA4_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.940e-26 Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 96 HPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMSVTLE+A LL + +S N G S D L AN++R G R+ +A+KNVGR YSFNALQR+ +P++Y+PP TIQD++TS RDS Sbjct: 948 HLLLDPLMAVVQSENAASKNTRILLEASDVVRRLNGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLLGATEQLNI--------------SAD---------ELNAANLMREFGIRIKIAKKNVGRFKYSFNALQRKMLPDIYRPPVSTIQDMVTSVTARDS 1092
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A397AYA6_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AYA6_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.670e-26 Identity = 77/168 (45.83%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 96 HPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGDANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMSVTLE+A LL + +S N G AE A AN++R G R+ +A KNVGR YSFNA+QR+ +P++Y+PP TIQD++TS RDS Sbjct: 1010 HLLLDPLMAVVQSENAAAKNTRILLEASDVVRRLRGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLLGATEQLNI--------------------GAEELHA---ANIMREFGIRIEIANKNVGRYKYSFNAIQRKMLPDIYRPPMSTIQDIVTSVTARDS 1154
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Match: A0A5D6YDX5_9STRA (Phosphatidylinositol-3,4-bisphosphate 4-phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDX5_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.880e-26 Identity = 78/170 (45.88%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 102 ALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSVTLEEALLLAEVLSRRNESGSSGVXXXXXXXXXXXXXXXXXXXASGDGWRAAERSGALGD----ANVLRAHGCRLLVAEKNVGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 599 +L L +V + + KNT ILL A AVR L GGR+TFCKSGKDRTAMSVTLE+A L + E+ +G G G +G L + ANVLRA G R+ +A KNVGR YSFNALQR+ +PE+Y+PP TIQD++TS RDS Sbjct: 1233 SLRHLRVSVEGESSSAKNTCILLHASDAVRSLRGGRLTFCKSGKDRTAMSVTLEQARRLVQRQRHVLEAIEAG---------------------GGAGAPTTAAAGPLDEVQSVANVLRAFGVRMAIAHKNVGRFQYSFNALQRKLLPEIYRPPVATIQDMVTSVTARDS 1381 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1660.4466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1660.4466.1 >prot_L-elsbetiae_contig1660.4466.1 ID=prot_L-elsbetiae_contig1660.4466.1|Name=mRNA_L-elsbetiae_contig1660.4466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp MHPALTELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTback to top mRNA from alignment at L-elsbetiae_contig1660:20197..24004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1660.4466.1 ID=mRNA_L-elsbetiae_contig1660.4466.1|Name=mRNA_L-elsbetiae_contig1660.4466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3808bp|location=Sequence derived from alignment at L-elsbetiae_contig1660:20197..24004- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1660:20197..24004- >mRNA_L-elsbetiae_contig1660.4466.1 ID=mRNA_L-elsbetiae_contig1660.4466.1|Name=mRNA_L-elsbetiae_contig1660.4466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig1660:20197..24004- (Laminarionema elsbetiae ELsaHSoW15)back to top |