mRNA_L-elsbetiae_contig16594.4459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.020e-63 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 LTEV+R+LRKKLG NT LSV LTLAETLVKNCHDPVHREIASERFMAAVA+IARTYSFK NR+SLAIADQSLDIIQAWGEAFLPRRREFPLFV+TYHELRAEGLPFS QYQSDRPP Sbjct: 58 LTEVIRILRKKLGSSNTTVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKIARTYSFKPNRQSLAIADQSLDIIQAWGEAFLPRRREFPLFVETYHELRAEGLPFSAQYQSDRPP 175
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A835YSD0_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD0_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.060e-35 Identity = 65/116 (56.03%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 25 EVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 EVVR +RK+L + + + LTL ETLVKNC P+HREIA E FM + +A+ ++ +T+RESL +A+++LD+IQ+WGEAFLP+RRE PLFV+TYH LR +GLPF QY++DR P Sbjct: 65 EVVRAVRKRLAHKSIPVVMLALTLTETLVKNCGMPLHREIAKENFMQDMTVLAKRHTTRTSRESLQVANKTLDLIQSWGEAFLPQRRELPLFVETYHRLRKDGLPFDAQYKADRAP 180
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A4D9CTC8_9STRA (VHS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTC8_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.300e-32 Identity = 58/116 (50.00%), Postives = 84/116 (72.41%), Query Frame = 1 Query: 25 EVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 E++R +RK+L +T + + L L ET+VKNC VH+E+A+ +FMA +AR+ARTYS +T +E+L +AD+++D+IQ+WGEAFLP + PLF TYH+LR EGL F QY + P Sbjct: 64 EIIRQIRKRLQHRSTRVVHMALELIETVVKNCGPSVHKEVATPKFMATMARVARTYSERTGKENLQVADKAMDLIQSWGEAFLPMAHQLPLFSQTYHQLRREGLTFRTQYDETKVP 179
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A2P4YGK1_9STRA (VHS domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YGK1_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.170e-31 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R L+ +LG ++ + + LTL E++VKNC D VH+EIA+E FM + + R ++ K R+S+ IA + LD+IQAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 71 LKESIRYLKLRLGDASSRVVILALTLTESVVKNCGDLVHQEIATESFMGEMEALHRLHANKRGRDSMEIASRVLDMIQAWGEAFLPFRHEFPLFVDTYHNMRKKGIKFPDQYDESKVP 188
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A0P1AM73_PLAHL (VHS domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM73_PLAHL) HSP 1 Score: 124 bits (312), Expect = 6.720e-31 Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R LR +LG ++ + + LTL E++VKNC D VH+EIA+E+FM+ + + RT+S K R+S+ IA + LD++QAWGEAFLP R +FPLFVDTYH +R +G+ F +QY + P Sbjct: 78 LKESIRYLRLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEQFMSEMEELHRTHSNKRGRQSMEIASRVLDMVQAWGEAFLPFRHDFPLFVDTYHNMRKKGIKFPDQYDESKVP 195
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: H3H7R0_PHYRM (VHS domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7R0_PHYRM) HSP 1 Score: 124 bits (310), Expect = 1.120e-30 Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R L+ +LG +T + + LTL E++VKNC D VH+E+A+E FM + + RT++ K RES+ IA + LD++QAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 83 LKESIRYLKLRLGDPSTRVVILALTLTESIVKNCGDLVHQEVATEPFMGEMEALYRTHANKRGRESMEIASRVLDMVQAWGEAFLPFRHEFPLFVDTYHNMRKKGIKFPDQYDESKVP 200
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A329S7I2_9STRA (VHS domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S7I2_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.370e-30 Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R L+ +LG ++ + + LTL E++VKNC D VH+EIA+E+FM + + RT++ K RES+ IA + LD++QAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 82 LKESIRYLKLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEQFMGEMETLYRTHANKRGRESMEIASRVLDMVQAWGEAFLPFRHEFPLFVDTYHNMRKKGIKFPDQYDESKVP 199
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A3M6VSQ9_9STRA (VHS domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSQ9_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.740e-30 Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 16 SLTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 SL E VR LR +LG ++ + + LTL E++VKNC D VH+EIASE FM + + R ++ K R S+ IA + LD+IQAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 10 SLKESVRYLRLRLGDPSSRVVVLALTLTESIVKNCGDLVHQEIASESFMNEMEALYRIHANKRGRTSMEIASRVLDMIQAWGEAFLPFRHEFPLFVDTYHNMRRKGIKFPDQYDESKVP 128
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: G5AI13_PHYSP (VHS domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI13_PHYSP) HSP 1 Score: 122 bits (306), Expect = 3.950e-30 Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R L+ +LG ++ + + LTL E++VKNC D VH+EIA+E FM+ + + RT++ K R+S+ IA + LD++QAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 82 LKESIRYLKLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEPFMSEMEALYRTHASKRGRDSMEIASRVLDMVQAWGEAFLPYRHEFPLFVDTYHNMRKKGIKFPDQYDETKVP 199
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Match: A0A6A3KF79_9STRA (VHS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KF79_9STRA) HSP 1 Score: 121 bits (304), Expect = 9.830e-30 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 19 LTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASERFMAAVARIARTYSFKTNRESLAIADQSLDIIQAWGEAFLPRRREFPLFVDTYHELRAEGLPFSEQYQSDRPP 372 L E +R L+ +LG + + + LTL E++VKNC D VH+EIA+E FM+ + + T++ K RES+ IA + LD++QAWGEAFLP R EFPLFVDTYH +R +G+ F +QY + P Sbjct: 82 LKESIRYLKLRLGDPSARVIILALTLTESIVKNCGDLVHQEIATEPFMSEMEALYSTHASKRGRESMEIASRVLDMVQAWGEAFLPYRHEFPLFVDTYHNMRKKGIKFPDQYDESKVP 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16594.4459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16594.4459.1 >prot_L-elsbetiae_contig16594.4459.1 ID=prot_L-elsbetiae_contig16594.4459.1|Name=mRNA_L-elsbetiae_contig16594.4459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MRLILSLTEVVRVLRKKLGLGNTMALSVGLTLAETLVKNCHDPVHREIASback to top mRNA from alignment at L-elsbetiae_contig16594:459..3562+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16594.4459.1 ID=mRNA_L-elsbetiae_contig16594.4459.1|Name=mRNA_L-elsbetiae_contig16594.4459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3104bp|location=Sequence derived from alignment at L-elsbetiae_contig16594:459..3562+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16594:459..3562+ >mRNA_L-elsbetiae_contig16594.4459.1 ID=mRNA_L-elsbetiae_contig16594.4459.1|Name=mRNA_L-elsbetiae_contig16594.4459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig16594:459..3562+ (Laminarionema elsbetiae ELsaHSoW15)back to top |