mRNA_L-elsbetiae_contig1656.4442.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A6H5JZH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH5_9PHAE) HSP 1 Score: 137 bits (345), Expect = 4.730e-32 Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 1 Query: 763 VDRIWRAADYVATHLRHNHVRVQELLAFEALASVPRISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINNAR 1026 V+RI RAADYVATHL++NH ALA+VPRISMCSFSVQDIALFLPTMVGSP+GS+GG VFLAFHVNCPNRYLSEESINNAR Sbjct: 1261 VERIRRAADYVATHLQYNH----------ALAAVPRISMCSFSVQDIALFLPTMVGSPDGSSGGPVFLAFHVNCPNRYLSEESINNAR 1338
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: D7FIX1_ECTSI (Autophagy-related protein 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX1_ECTSI) HSP 1 Score: 103 bits (256), Expect = 2.020e-20 Identity = 59/93 (63.44%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 748 AALRPVDRIWRAADYVATHLRHNHVRVQELLAFEALASVPRISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINNAR 1026 A+L V+RI RAADYVATHL++NH ALA+VPRISMCSFSVQ GSPEGS+GG V L FHVN PNRYLSE+SINNAR Sbjct: 1097 ASLGGVERIRRAADYVATHLQYNH----------ALAAVPRISMCSFSVQG---------GSPEGSSGGPVVLGFHVNWPNRYLSEDSINNAR 1170
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: M4B4J6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4J6_HYAAE) HSP 1 Score: 62.0 bits (149), Expect = 7.270e-7 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS CSFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 688 KISFCSFSVNDLALFLPT---SAPGSDVQRVYLAFHLGCPHRFLSEESISS 735
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A329S4M2_9STRA (ATG11 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S4M2_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.180e-6 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 122 KISFRSFSVNDLALFLPT---SAPGSDAQRVYLAFHLGCPHRFLSEESISS 169
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A0P1AVE8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVE8_PLAHL) HSP 1 Score: 58.9 bits (141), Expect = 7.930e-6 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 812 KISFRSFSVNDLALFLPT---SAPGSEAQRVYLAFHLGCPHRFLSEESISS 859
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: V9FBB8_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9FBB8_PHYPR) HSP 1 Score: 58.5 bits (140), Expect = 9.760e-6 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 702 KISFRSFSVNDLALFLPT---SAPGSDAQRVYLAFHLGCPHRFLSEESISS 749
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A3R7K0T3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0T3_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 9.850e-6 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 724 KISFRSFSVNDLALFLPT---SAPGSDAQRVYLAFHLGCPHRFLSEESISS 771
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A6A3EVJ5_9STRA (ATG11 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EVJ5_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 9.980e-6 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 762 KISFRSFSVNDLALFLPT---SAPGSDAQRVYLAFHLGCPHRFLSEESISS 809
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A662XPG0_9STRA (ATG11 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPG0_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.000e-5 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESINN 1020 +IS SFSV D+ALFLPT S GS V+LAFH+ CP+R+LSEESI++ Sbjct: 769 KISFRSFSVSDLALFLPT---SAPGSDSQRVYLAFHLGCPHRFLSEESISS 816
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Match: A0A397E0U3_9STRA (ATG11 domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E0U3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.000e-5 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 868 RISMCSFSVQDIALFLPTMVGSPEGSAGGSVFLAFHVNCPNRYLSEESI 1014 +I+ SFS D+ALFLPT +P +A ++LAFH+ CPNR+LS+ESI Sbjct: 151 KIAFRSFSYNDLALFLPTF--APTDAAAAKIYLAFHLGCPNRFLSDESI 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1656.4442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1656.4442.1 >prot_L-elsbetiae_contig1656.4442.1 ID=prot_L-elsbetiae_contig1656.4442.1|Name=mRNA_L-elsbetiae_contig1656.4442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp AAPPPGSAEGNAEPLERAAPANAAVEAATAAAEEEKEEEEGGAGSSSSPAback to top mRNA from alignment at L-elsbetiae_contig1656:4324..6720- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1656.4442.1 ID=mRNA_L-elsbetiae_contig1656.4442.1|Name=mRNA_L-elsbetiae_contig1656.4442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2397bp|location=Sequence derived from alignment at L-elsbetiae_contig1656:4324..6720- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1656:4324..6720- >mRNA_L-elsbetiae_contig1656.4442.1 ID=mRNA_L-elsbetiae_contig1656.4442.1|Name=mRNA_L-elsbetiae_contig1656.4442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig1656:4324..6720- (Laminarionema elsbetiae ELsaHSoW15)back to top |