mRNA_L-elsbetiae_contig1655.4439.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1655.4439.1
Unique NamemRNA_L-elsbetiae_contig1655.4439.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: D7FNH2_ECTSI (Putative: flagellar/basal body protein, PACRG (Parkin co-regulated gene)-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH2_ECTSI)

HSP 1 Score: 605 bits (1560), Expect = 1.030e-214
Identity = 310/323 (95.98%), Postives = 316/323 (97.83%), Query Frame = 1
Query:   76 MTARTVNGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDS--GQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            MTART+NGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGE+S  G  +KGG + RASAR AAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQ+AVIVKVLKVLQ+LVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS
Sbjct:    1 MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASAR-AAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 322          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A6S9L0N5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L0N5_HETAK)

HSP 1 Score: 459 bits (1182), Expect = 1.530e-157
Identity = 238/317 (75.08%), Postives = 264/317 (83.28%), Query Frame = 1
Query:   91 VNGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTV-IPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            +N S+KI  +++  K TGSPFD+T + + + RPGGHD LP K IDV AFS SK+T   +P +F+K+GTG GGT+ IP    +   +PS            A   +K K+ DFQAFA+R NPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQ+ VIVKVLKVLQALV CD GPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:    7 MNDSLKIANRNQGPKITGSPFDSTIVGAYRERPGGHDILPTKAIDVGAFSISKKTNRPTPQNFVKKGTGTGGTLTIP----QKDEKPS------------AHVQRKKKIEDFQAFAQRANPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 307          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A7S2UTZ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ0_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 9.760e-154
Identity = 234/312 (75.00%), Postives = 257/312 (82.37%), Query Frame = 1
Query:  103 IKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            I+I +++   K TGSPFD+T I + K RPGGH+ +  + +DV AF+ +K TA  +P  FLK+GTG GGT+             KGG   +  A      KK K RDF AFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQ+ VIVKVLKVLQALV CD GP+GQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELIMETLE FEV+GG+DAFINIKYLVPV+QSVVV+
Sbjct:   13 IRISDRNHGSKHTGSPFDSTLIANYKDRPGGHEIIKPRNVDVGAFAVTKTTAKPTPDRFLKKGTGLGGTLTA----------PKGGPQEQTKA------KKDKCRDFGAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRETEDPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKKVIVKVLKVLQALVQCDTGPEGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELIMETLEQFEVHGGDDAFINIKYLVPVYQSVVVT 308          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A836CE89_9STRA (Putative flagellar/basal body protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE89_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 4.970e-153
Identity = 231/316 (73.10%), Postives = 255/316 (80.70%), Query Frame = 1
Query:   91 VNGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            ++GS+K+  + +  K TGSPFD T   S+  R GGH+ L  + IDV+AFS+SK+    SP  FLKRGTG GG + P  +                       VKK+K +DFQAF+ERPNPPNT+ RRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+EMPYAFLAEQGVYDMLSAGS KVLPVIPQLIIPIKTALNTR + VIVKVLKVLQALV CDQG DGQ LIGQALVPYYRQILP+LNIFIR NDNLGD IDYGQQRRENLGELI+ETLEAFEVNGGEDAFINIKYLVPV+QSVVV+
Sbjct:    1 MSGSLKLGTQKETIKHTGSPFDTTTA-SLTKRAGGHEGLAPRAIDVAAFSHSKQVEKPSPKKFLKRGTGIGGMLAPVAT--------------------TTVVKKSKPKDFQAFSERPNPPNTQLRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREMEMPYAFLAEQGVYDMLSAGSAKVLPVIPQLIIPIKTALNTRIKGVIVKVLKVLQALVACDQGTDGQALIGQALVPYYRQILPILNIFIRNNDNLGDTIDYGQQRRENLGELIVETLEAFEVNGGEDAFINIKYLVPVYQSVVVT 295          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A8J2WZN8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZN8_9STRA)

HSP 1 Score: 429 bits (1104), Expect = 9.730e-146
Identity = 221/321 (68.85%), Postives = 254/321 (79.13%), Query Frame = 1
Query:   76 MTARTVNGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            M A      +++R++   F ETGS FD+T   +I +R GGH++LP + ++  AF  S+RT  + P  FLK+GTG GGT           +P+    A     R+A    K+KL DFQAFAERPNPPNTEFRRFYERGDLPVQ+DHGGV NR+AWKVD+QKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPV+PQLIIPIKTALNTR + VIVKVLKVLQALV CD  P+GQ LIGQALVPYYRQILPVLNIF+R NDNLGDGIDYGQQRRENLGELI ETLE FEV+GGEDAFINIKYLVPV+QSVVV+
Sbjct:    1 MPATIDKNDLRVRQRQVHFAETGSCFDSTNFEAITVRAGGHESLPRRRVNAEAFGNSRRTRRELPSDFLKKGTGTGGTDA---------RPAP---AEEVKKRQAP---KSKLMDFQAFAERPNPPNTEFRRFYERGDLPVQVDHGGVSNRVAWKVDVQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVVPQLIIPIKTALNTRSKPVIVKVLKVLQALVACDCVPEGQHLIGQALVPYYRQILPVLNIFVRSNDNLGDGIDYGQQRRENLGELIAETLEHFEVHGGEDAFINIKYLVPVYQSVVVA 306          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A7S2KYM2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYM2_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 4.150e-138
Identity = 217/319 (68.03%), Postives = 247/319 (77.43%), Query Frame = 1
Query:  103 IKIREKHKIFKETGSPFDATPI-HSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGT------VIPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            IK+REK   F ETGS FDAT + H  K+R GGH+ LP K +D +AF + K+TA ++P  F ++GTG GGT      V+P               +T          KK K  +F AFA RPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKV I KLD+HHYLPIFFDGLRE+E PYAFLAEQGVYDM+  GS+KVLPVIPQLIIPIKTALNTRQR VI+KVLKVLQALV CDQ  + Q L+GQALVPYYRQILPVLNIFIRQN+NLGDGIDYGQ+ R +LGELIMETLE FE+NGGEDAFINIKYLVPV+QS +++
Sbjct:    9 IKMREKLPSFAETGSCFDATKLGHLSKVRAGGHEALPIKYVDENAFCFVKKTARRTPQEFTRKGTGTGGTLRIPKPVVP---------------STMPIEPPVLKEKKKKAINFSAFAARPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVAIDKLDYHHYLPIFFDGLREIEEPYAFLAEQGVYDMMQMGSSKVLPVIPQLIIPIKTALNTRQRIVIIKVLKVLQALVKCDQ--NEQNLVGQALVPYYRQILPVLNIFIRQNENLGDGIDYGQKTRGSLGELIMETLEEFEMNGGEDAFINIKYLVPVYQSSILT 310          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: K0SM83_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SM83_THAOC)

HSP 1 Score: 394 bits (1012), Expect = 1.630e-131
Identity = 212/328 (64.63%), Postives = 244/328 (74.39%), Query Frame = 1
Query:  112 REKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGE-------DSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQG------------VYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            R K   F ETGS FDAT  H I ++PGGHD LP   +DVSAFS+S++   +SP  F++RGTG GGT+ P    E       ++  PS G    R S  R    K+ K     AF ERPNPPNTEFRRFYERGDLPVQI+HGG HNRIAWKV I+KLDFHHYLPIFFDGLRE+EMPYAFLAEQG            VYDM+  GSNKV PV+PQLIIPIKTALNTR ++VI KVLKVLQALV CD+G +   L+GQALVPYYRQILPVLNIFIR+NDNLGDGIDYGQ+ R NLG LIME LEAFEV GG+DA+INIKY VP+++S ++S
Sbjct:    6 RRKTPTFVETGSCFDATNAHHITVQPGGHDALPKNELDVSAFSFSRKIERRSPKQFMRRGTGTGGTLRPPTKDETPPDFPDENVTPSPG---RRLSTDRIRNPKQKKT----AFMERPNPPNTEFRRFYERGDLPVQIEHGGCHNRIAWKVAIEKLDFHHYLPIFFDGLREVEMPYAFLAEQGKFPSLRVFLRKGVYDMMQIGSNKVAPVVPQLIIPIKTALNTRDQSVIAKVLKVLQALVKCDKGKN---LVGQALVPYYRQILPVLNIFIRKNDNLGDGIDYGQRHRGNLGGLIMECLEAFEVAGGQDAYINIKYFVPIYESSILS 323          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: F0Y9M8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9M8_AURAN)

HSP 1 Score: 367 bits (941), Expect = 2.620e-122
Identity = 180/200 (90.00%), Postives = 189/200 (94.50%), Query Frame = 1
Query:  427 AFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQS 1026
            AFAERPNPPNTEFRRFYERGDLPVQIDHGGV NRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPVIPQLIIPIKTALNTR++ VIVKVLKVLQALV CD  P+GQ LIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLE FE++GGEDAFINIKYLVP +QS
Sbjct:   27 AFAERPNPPNTEFRRFYERGDLPVQIDHGGVTNRIAWKVDIQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVIPQLIIPIKTALNTRKKEVIVKVLKVLQALVMCDTVPEGQHLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEYFEIHGGEDAFINIKYLVPTYQS 226          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A7S4D719_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D719_HETAK)

HSP 1 Score: 359 bits (922), Expect = 1.150e-119
Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 1
Query:  469 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1038
            RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQ+ VIVKVLKVLQALV CD GPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:   22 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 211          
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Match: A0A7S2AT99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT99_9STRA)

HSP 1 Score: 357 bits (915), Expect = 5.100e-117
Identity = 187/308 (60.71%), Postives = 223/308 (72.40%), Query Frame = 1
Query:  109 IREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDSGQPSKGGGATRASARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVV 1032
            +R+    ++ETGS FD+T +  IK RPG  +      +DVSAFS S+RT  ++  SF K+GTG+GGT+I         +P  G              KK      +A + R NPPNTEFRRFYERGDLPVQIDHGGV N++ WKVDI+KLDFHHYLPIF++GLRE+E PY F+A QGVYDML  G NKVLPVIPQLIIP+KTALNTR + VI KVLKVLQ  V CDQ  + QGLIGQA VPYYRQILPVLN++ R  DN GDGIDY Q+ ++NLGELI ETLE FE+ GG+DAFINIKYL+P +QSVV
Sbjct:   28 VRKSALKWRETGSVFDSTNVGVIKARPGVDECAAMPDVDVSAFSMSRRTTRKTADSFTKKGTGSGGTLI---------KPKNG------------PAKKPLTFSKKATSRRSNPPNTEFRRFYERGDLPVQIDHGGVENKLQWKVDIKKLDFHHYLPIFYEGLREVEEPYNFIARQGVYDMLHFGYNKVLPVIPQLIIPLKTALNTRDKEVIQKVLKVLQETVKCDQRGNEQGLIGQAFVPYYRQILPVLNLYCRAIDNQGDGIDYSQRFQKNLGELIGETLEIFEIYGGDDAFINIKYLIPTYQSVV 314          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1655.4439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH2_ECTSI1.030e-21495.98Putative: flagellar/basal body protein, PACRG (Par... [more]
A0A6S9L0N5_HETAK1.530e-15775.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UTZ0_9STRA9.760e-15475.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CE89_9STRA4.970e-15373.10Putative flagellar/basal body protein n=1 Tax=Trib... [more]
A0A8J2WZN8_9STRA9.730e-14668.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KYM2_9STRA4.150e-13868.03Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
K0SM83_THAOC1.630e-13164.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
F0Y9M8_AURAN2.620e-12290.00Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4D719_HETAK1.150e-11993.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AT99_9STRA5.100e-11760.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1655contigL-elsbetiae_contig1655:18432..22357 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score605.9
Seed ortholog evalue1.1e-170
Seed eggNOG ortholog2880.D7FNH2
Preferred namePACRG
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of cell death
EggNOG OGsKOG3961@1,KOG3961@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionputative: flagellar/basal body protein, PACRG (parkin co-regulated gene) -like protein
Ec32 orthologEc-01_005470.1
Exons6
Model size1573
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1655.4439.1prot_L-elsbetiae_contig1655.4439.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1655 18507..21825 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.52357-UTR-L-elsbetiae_contig1655:18431..185061622815686.52357-UTR-L-elsbetiae_contig1655:18431..18506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1655 18432..18506 +
1691683037.6837344-UTR-L-elsbetiae_contig1655:18431..185061691683037.6837344-UTR-L-elsbetiae_contig1655:18431..18506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1655 18432..18506 +
1622815686.606163-UTR-L-elsbetiae_contig1655:21825..223571622815686.606163-UTR-L-elsbetiae_contig1655:21825..22357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1655 21826..22357 +
1691683037.7677872-UTR-L-elsbetiae_contig1655:21825..223571691683037.7677872-UTR-L-elsbetiae_contig1655:21825..22357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1655 21826..22357 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.5341034-CDS-L-elsbetiae_contig1655:18506..186111622815686.5341034-CDS-L-elsbetiae_contig1655:18506..18611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 18507..18611 +
1691683037.7006607-CDS-L-elsbetiae_contig1655:18506..186111691683037.7006607-CDS-L-elsbetiae_contig1655:18506..18611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 18507..18611 +
1622815686.5439076-CDS-L-elsbetiae_contig1655:19220..194661622815686.5439076-CDS-L-elsbetiae_contig1655:19220..19466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 19221..19466 +
1691683037.7174687-CDS-L-elsbetiae_contig1655:19220..194661691683037.7174687-CDS-L-elsbetiae_contig1655:19220..19466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 19221..19466 +
1622815686.5541055-CDS-L-elsbetiae_contig1655:19859..199881622815686.5541055-CDS-L-elsbetiae_contig1655:19859..19988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 19860..19988 +
1691683037.7277927-CDS-L-elsbetiae_contig1655:19859..199881691683037.7277927-CDS-L-elsbetiae_contig1655:19859..19988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 19860..19988 +
1622815686.5678806-CDS-L-elsbetiae_contig1655:20364..205211622815686.5678806-CDS-L-elsbetiae_contig1655:20364..20521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 20365..20521 +
1691683037.7388704-CDS-L-elsbetiae_contig1655:20364..205211691683037.7388704-CDS-L-elsbetiae_contig1655:20364..20521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 20365..20521 +
1622815686.581273-CDS-L-elsbetiae_contig1655:21081..212491622815686.581273-CDS-L-elsbetiae_contig1655:21081..21249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 21082..21249 +
1691683037.7503605-CDS-L-elsbetiae_contig1655:21081..212491691683037.7503605-CDS-L-elsbetiae_contig1655:21081..21249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 21082..21249 +
1622815686.5947185-CDS-L-elsbetiae_contig1655:21664..218251622815686.5947185-CDS-L-elsbetiae_contig1655:21664..21825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 21665..21825 +
1691683037.7590964-CDS-L-elsbetiae_contig1655:21664..218251691683037.7590964-CDS-L-elsbetiae_contig1655:21664..21825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1655 21665..21825 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1655.4439.1

>prot_L-elsbetiae_contig1655.4439.1 ID=prot_L-elsbetiae_contig1655.4439.1|Name=mRNA_L-elsbetiae_contig1655.4439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
MTARTVNGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPID
VSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEDSGQPSKGGGATRA
SARRAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHN
RIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKV
LPVIPQLIIPIKTALNTRQRAVIVKVLKVLQALVTCDQGPDGQGLIGQAL
VPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNG
GEDAFINIKYLVPVFQSVVVS*
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mRNA from alignment at L-elsbetiae_contig1655:18432..22357+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1655.4439.1 ID=mRNA_L-elsbetiae_contig1655.4439.1|Name=mRNA_L-elsbetiae_contig1655.4439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3926bp|location=Sequence derived from alignment at L-elsbetiae_contig1655:18432..22357+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTGTCGGACCAAGACAGGATCATACCCGGCCAGAGCGTAGTTCCTCGG AAGAAAAAGGATAAAGTGAGTAGAGATGACGGCGAGGACGGTCAACGGGT CAATCAAAATCAGGGAGAAGCACAAGATTTTCAAAGAGACGGGCTCTCCT TTTGATGCGACACCGATTCACTCCATCAAGGTGCAGTACTATAGGCCTGG TTTCTGAACTTCCGGAAAGACCAACGTAACAGTATTGCGGTCGCTTGAGT GTCATGCTAGAATCAGGTCTCGTCGAGGTAGCTCCTATCATCATGGTGAA TATCGAGCTACCTGCGGCCGAGCTACGTGACGTTTCGGCTCATTGAACAG ATCCAGCGACAGCAAGTGTACCCTCAAAGAGCCGCACCAGAAGTCTACGT GCACTTCTTGCTAACCACGTGTGTGAGGGTTTTGAAATCTGTTTTGCCTA CCAAGTAGTCAAGGTGAACATTCGGCACCAAAGAAACCTCTTATCTCCCC GACCACATGCCAACCACGCATGAACTACTGGGTAAGCAGCGTATCGCTCA GACGAATGGTTTTAGCCCAAACAAAACCGACGCTGCACCCCCGGTTCGTG TGACACACAAAAGTGCGATGCACCCAACAAGACAGTCTCGTAATTTCTAT GGCATACGGCTCTTCGTGTGTTCGCCGCCACTCCGTACACCATTGCTGCT TCATCGCACGTAACCACAAGACCTCTGGACTAACCTCCGTCACCGGTGAC TGTGCGTGTTCCACCGATTTTGGCGAAATAAACGAGCAGCTTCGACCTGG TGGGCACGACACCCTCCCGGCGAAGCCCATCGATGTGTCGGCCTTTTCAT ACTCCAAAAGGACGGCACACCAGAGTCCACTGTCGTTCCTCAAGCGCGGA ACTGGTAACGGCGGAACCGTAATCCCATTTGGTTCAGGCGAAGATTCCGG CCAGCCATCGAAAGGAGGGGGGGCTACCCGAGCGTCTGCAAGGAGGGCAG CCGCGGTAAAGAAGACAAAGTTGCGGGATTTCCAGGTGACATGCTTACCA GGACTACACAGCACAAACATACAAAAGTACAGGAGATGGTTACGAGGGTA TTTACAGATTGGAGATATCTAGAGCTTACATATCTCGTTGACTTTGGTAT GTGGCAGATACTTTGACCCCTCTCGTCGAAGTGTTCTGTTTCGGTCATGC CTGATGGATCCATCGTTTCCCATCTGTGGTTCTGAGGTTGTACATATGGC ATACCTATGTCCGATAGCTTGTGGTAGACGATGCCTTGAAGATCTCTTTT ACTTTGCGGTATCTACCATACCCCATGAATGTGAGCTAAAAAGAAGAAAA AACACGATACATACGTCCTCATTATTCCACCGCGTATAGACTATATGGTT CCCGTTGTCCTGCTGAATGTTTCGCAAGGCGTTTGCCGAGCGTCCGAACC CGCCCAACACAGAGTTTCGGAGGTTCTACGAGCGAGGAGACCTGCCCGTG CAGATCGACCATGGCGGGGTGCACAACCGCATAGCGTGGAAGGTCGACAT CCAGAAGGTTGGGCGCATAAAACGAGACTTGGACGTGACAGCAGTATGTA CATAGTGGCATAACCTTCTCCAAAGCATGCCTCCTGCATGTTGTTTGTTG TCACAAGCGCGCTCATTTTTGCCCCCACGACTTGTGTGTGTCCGATTCAA AGATGGGTGGTTGGTTGTACACGATGTCGTCGTCGTCCGTACCTGAAATA CTTCTATTTCCCAGTCCGTATTTCTGTCTATAACAACGCGTTGCCCCTCA GCCGCCCACCACACCCGGGAGATGTGTTGAATATCAACTAAAAATTGATT ACTAAAACGAATTTCATTCAAGATCCCCAGCACTGTGTGCATGCTCGTTC TCCTCGCGTGAATGAAAAACGGCGTCTCTGCAGCTTGACTTCCACCACTA CCTGCCAATCTTTTTCGACGGGCTCCGCGAGCTGGAGATGCCCTACGCGT TCCTCGCGGAGCAAGGCGTGTACGACATGCTCAGCGCAGGGTCCAACAAG GTCCTGCCCGTCATCCCGCAGCTCATCATCCCCATCAAGAGTGAGTTGTG ATGATACAGAACCACCACGCCATGCTGTACTCTCTACCATGTAAATCACA GCCATCAATAGACTAGATCGATCGCCCTGGGCCCTCGATAATTACACAAA CTCACATAAACACAACCGGAGAATACAGATGCACACAAACCCGCCAACCA GCTGACGTGCCGTCACCGCCGACAACGAGCGAGCGGAAACCCAGACACGC CCTGCGTGAAAATCACGAGTCTATTGAAACAATGCGACCTTGGGGAAGGA GCCGCTAGAGGACGCAAACGTCCCGTGTCGCCATGTTCCGTCGATCTGTT GCGTAGCCGAGGTTCCGATTCAGAGTACATGCGTGCGGCCCTCTTCCTCT CTCTTGCATCACACACACACACACATTCTACACAGGGGGGAGTGTTTTTG GTGTTGGGCGACAAGTTCAGCAGTGGCACGTGTGCCCCCTTGTTATTTTC TAGTACTCAGGGGCGACAGCCTTAGCTCGCCATTACCTAGATACTCTCCA ACGAGCCTCTGCACGTGCGCGCGCGTGCCTGTTGTCATTTCGCTGTCCAG CCGCGCTCAACACGAGACAGAGGGCCGTGATCGTCAAGGTCCTTAAGGTG CTTCAGGCGCTCGTGACCTGTGACCAGGGGCCGGACGGGCAGGGGCTCAT CGGGCAGGCGCTTGTGCCTTACTATCGCCAGATCCTACCGGTGCTCAACA TCTTCATCCGGCAAAATGGTAGGTGCGGTACTTACGTAGCAAGAACGGAG ATCGGTTTGTGTGTGGTACACTATGTGGTTGAAGTGCCGTTGAAAAGCAT TCTGTAGTGTTTCGTCTTCAGGCATGAAGGGTGTGACCCACCGGTTGCAT CTTTTGCTCCAATGTCTGTGTCCTCTGCGCAATGCACCTCTCTTACATTA GATATGGCTGCCTGAGGTTTGCACATTCCGCATGGCGTGTATACCAGCCG CTTTGTTCTCTCGGGGCGGCGGCTACGGCAAATACAGCGCGTTTGAGAAG GGTTTCCCCCCAGAACCCCAGCCTGCCAAGCTCTTGAACAAACGACAAAG GCGAAGTATCCCCATGGCAACAACCGAGTACCCCATTATCCCTCCTGCAC TTCCTCGCTCGTTGCCGTTCCTCACCGTAAAAGACAACCTCGGAGACGGC ATCGACTACGGCCAGCAGAGGCGGGAAAATCTCGGGGAGCTCATCATGGA AACCCTGGAGGCGTTCGAGGTAAACGGCGGAGAGGACGCCTTCATCAACA TCAAGTACCTCGTGCCTGTCTTCCAGAGTGTCGTCGTGAGCTAATTTCTA GCCAAGGGAAAAACTCTTGTGAGGCCTTGTTTTGTGGGAAGCAATAAAAA ACACGACGCGCCCATGAGCGGGTGCTTGATGAAGAGTAGACTGTAATATC GTTTGTATTTAGCTTGCGAAGGAAATTCTCTCCTCGGCTACTGCCACTGA TTGGGGGCCCTGTTCGGGAGAGGGAGCAGAAGCATTGGATCTTCCTGGAC GATTAAAAAGCTATCCTGCTATTTAGGTAGAAGACGGCTACTTTATATCT TTCGGACGGCACGAGTGATCGGGGGAGGGAGAAACAAGTGGGTGCTAAAA AAAAAGAATTTCTTTTTGACCATCGTCGGTATCAAAGTAGTAGTACATCA TCACTTGAATCCTAGTTGCTCGTGGTGCGGGGCAGCCGATGCGCCACACG AAGATTGGCGGCACTGGCATTTAGTTTGCTCAACACTTGGGCGTGAAGAT ATACATGCACATGGAGCAGAAATCCCACCGTGATTTCGAGTAGTGGGGTT GCGCACAGTGTAAAACGTGTATGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1655:18432..22357+

>mRNA_L-elsbetiae_contig1655.4439.1 ID=mRNA_L-elsbetiae_contig1655.4439.1|Name=mRNA_L-elsbetiae_contig1655.4439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1932bp|location=Sequence derived from alignment at L-elsbetiae_contig1655:18432..22357+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGCGAGGACGGTCAACGGGTCAATCAAAATCAGGGAGAAGCACAA
GATTTTCAAAGAGACGGGCTCTCCTTTTGATGCGACACCGATTCACTCCA
TCAAGATGACGGCGAGGACGGTCAACGGGTCAATCAAAATCAGGGAGAAG
CACAAGATTTTCAAAGAGACGGGCTCTCCTTTTGATGCGACACCGATTCA
CTCCATCAAGCTTCGACCTGGTGGGCACGACACCCTCCCGGCGAAGCCCA
TCGATGTGTCGGCCTTTTCATACTCCAAAAGGACGGCACACCAGAGTCCA
CTGTCGTTCCTCAAGCGCGGAACTGGTAACGGCGGAACCGTAATCCCATT
TGGTTCAGGCGAAGATTCCGGCCAGCCATCGAAAGGAGGGGGGGCTACCC
GAGCGTCTGCAAGGAGGGCAGCCGCGGTAAAGAAGACAAAGTTGCGGGAT
TTCCAGCTTCGACCTGGTGGGCACGACACCCTCCCGGCGAAGCCCATCGA
TGTGTCGGCCTTTTCATACTCCAAAAGGACGGCACACCAGAGTCCACTGT
CGTTCCTCAAGCGCGGAACTGGTAACGGCGGAACCGTAATCCCATTTGGT
TCAGGCGAAGATTCCGGCCAGCCATCGAAAGGAGGGGGGGCTACCCGAGC
GTCTGCAAGGAGGGCAGCCGCGGTAAAGAAGACAAAGTTGCGGGATTTCC
AGGCGTTTGCCGAGCGTCCGAACCCGCCCAACACAGAGTTTCGGAGGTTC
TACGAGCGAGGAGACCTGCCCGTGCAGATCGACCATGGCGGGGTGCACAA
CCGCATAGCGTGGAAGGTCGACATCCAGAAGGCGTTTGCCGAGCGTCCGA
ACCCGCCCAACACAGAGTTTCGGAGGTTCTACGAGCGAGGAGACCTGCCC
GTGCAGATCGACCATGGCGGGGTGCACAACCGCATAGCGTGGAAGGTCGA
CATCCAGAAGCTTGACTTCCACCACTACCTGCCAATCTTTTTCGACGGGC
TCCGCGAGCTGGAGATGCCCTACGCGTTCCTCGCGGAGCAAGGCGTGTAC
GACATGCTCAGCGCAGGGTCCAACAAGGTCCTGCCCGTCATCCCGCAGCT
CATCATCCCCATCAAGACTTGACTTCCACCACTACCTGCCAATCTTTTTC
GACGGGCTCCGCGAGCTGGAGATGCCCTACGCGTTCCTCGCGGAGCAAGG
CGTGTACGACATGCTCAGCGCAGGGTCCAACAAGGTCCTGCCCGTCATCC
CGCAGCTCATCATCCCCATCAAGACCGCGCTCAACACGAGACAGAGGGCC
GTGATCGTCAAGGTCCTTAAGGTGCTTCAGGCGCTCGTGACCTGTGACCA
GGGGCCGGACGGGCAGGGGCTCATCGGGCAGGCGCTTGTGCCTTACTATC
GCCAGATCCTACCGGTGCTCAACATCTTCATCCGGCAAAATGCCGCGCTC
AACACGAGACAGAGGGCCGTGATCGTCAAGGTCCTTAAGGTGCTTCAGGC
GCTCGTGACCTGTGACCAGGGGCCGGACGGGCAGGGGCTCATCGGGCAGG
CGCTTGTGCCTTACTATCGCCAGATCCTACCGGTGCTCAACATCTTCATC
CGGCAAAATGACAACCTCGGAGACGGCATCGACTACGGCCAGCAGAGGCG
GGAAAATCTCGGGGAGCTCATCATGGAAACCCTGGAGGCGTTCGAGGTAA
ACGGCGGAGAGGACGCCTTCATCAACATCAAGTACCTCGTGCCTGTCTTC
CAGAGTGTCGTCGTGAGCTAAACAACCTCGGAGACGGCATCGACTACGGC
CAGCAGAGGCGGGAAAATCTCGGGGAGCTCATCATGGAAACCCTGGAGGC
GTTCGAGGTAAACGGCGGAGAGGACGCCTTCATCAACATCAAGTACCTCG
TGCCTGTCTTCCAGAGTGTCGTCGTGAGCTAA
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