mRNA_L-elsbetiae_contig1655.4437.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Match: D7FNH4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH4_ECTSI) HSP 1 Score: 848 bits (2192), Expect = 1.310e-303 Identity = 448/630 (71.11%), Postives = 498/630 (79.05%), Query Frame = 2 Query: 59 PAPDRRPRSAATPPSRGSSRHG----------VAGGE---AVPSRFKRVLDKATGKHYYYDKETKETFWTLAEGPAGIQLSTTPEDPRKRRKTYGIPPTDVEAVAQNQRAIIWWKVPGLHGGGERGSGQTGGGARATKTKAAIGGASRKRGSGSVAAEAGFAGDGERGTDNLTPETVGFVVYRYRLDGREWHKKGATHVDGAKTVSASIKALSNGLVYRFTVASQTTEGVSAESEPSVAVRPNEPLPEGWKEKFNAVTGKSVYTNVKTGQTSSERPECDPFFVETDLFLKFTPEETEALSEEFRTRAEIQSSTMVTIDDVMDILPRIGEPLREVEVVKRLKEGGWEQPGEASASASVSAPGARDLASVTYQQFLALLWGIKGPKVSRRSLGRRLLDVIVASLTPGSVSSKKLALMEQDPGKRMGNWEKLVHPVARRQYFVNKDTGQASWNTPAEVKFFLNDKLRKDLLKTTFSEEELAGLQKAFGRMDLDGNGCIDADELGLVLNSFGEAVPPGRLKALIREVDXXXXXXXXXXXFTVMMSAVKKGKASLGWGRINKHLQGDDDRRFDGLKGQFEGIKAMQK-ATAGSGV-----GRANHGKFCLCGCRGVQPTNEH-KVVYKDWRTTKM 1888 P P+RRPR A TP SR S+ G VAGGE A PSRFKRVLDKATGKHYYYDKETKETFWTLA+ P I + PEDPRKRRKTYG+PPT VEAVAQNQ A++WWK+P E G TGG +AT T G + + GSG A E+ AGD E+ + L P +GFVVYRYRLDGREWHKKGAT VD AK VS ++KALSNGLVYRFTVAS+T EG SAESEPSVAVRPNEPLPEGWKEKFNA TGKSVYTNVKTGQTSSERPEC+P+FVETDLFL+FTPEETE LSEEFRT AE+QSST+V IDD+MD+LPRIGEPLREVEVV+RLK GWE G RDL SVTY+QFLALLWGIKGPK +RRS+GRR+ D +VAS+TP SVSS+KLAL+EQDPGKRMGNWEKLVHPV RR YFVNKDTGQASW PAEVKFFLNDKLR+DLLKTTFSEEELAGLQKAF +MDLDGNG IDADELGLVL SFGEAVPPGRLKALIREVD FTVMMSAVK G+ASLGWGRIN+HLQGDDDR+FD LKGQ +KA QK AGSG GRA+HGKFCLCGCRG++P++ + K++YKDW T ++ Sbjct: 6 PTPERRPRHATTPSSRPVSKSGTPTAPTSLVLVAGGEGEEAAPSRFKRVLDKATGKHYYYDKETKETFWTLADAPNSISPNLPPEDPRKRRKTYGLPPTHVEAVAQNQGAVVWWKLPSSPEERE-GPQHTGGNTKATTTNTK--GGNGRGGSGGRAVESSVAGDEEKRSP-LVP--IGFVVYRYRLDGREWHKKGATSVDDAKAVSTAVKALSNGLVYRFTVASRTVEGDSAESEPSVAVRPNEPLPEGWKEKFNATTGKSVYTNVKTGQTSSERPECNPYFVETDLFLRFTPEETETLSEEFRTMAEMQSSTLVAIDDIMDVLPRIGEPLREVEVVRRLKAEGWE-----------GVKGGRDLPSVTYRQFLALLWGIKGPKSTRRSIGRRVWDAMVASVTPNSVSSRKLALIEQDPGKRMGNWEKLVHPVVRRAYFVNKDTGQASWTMPAEVKFFLNDKLRQDLLKTTFSEEELAGLQKAFAKMDLDGNGTIDADELGLVLKSFGEAVPPGRLKALIREVDHDGSDCIDFEEFTVMMSAVKNGRASLGWGRINRHLQGDDDRKFDVLKGQLNTLKARQKNGAAGSGTVVSGGGRASHGKFCLCGCRGIEPSDRNDKIIYKDWGTKQL 618
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Match: A0A6H5L615_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L615_9PHAE) HSP 1 Score: 190 bits (483), Expect = 3.350e-54 Identity = 92/101 (91.09%), Postives = 94/101 (93.07%), Query Frame = 2 Query: 1286 MGNWEKLVHPVARRQYFVNKDTGQASWNTPAEVKFFLNDKLRKDLLKTTFSEEELAGLQKAFGRMDLDGNGCIDADELGLVLNSFGEAVPPGRLKALIREV 1588 MGNWEKLVHPV RR YFVNKDTGQASW TP EVKFFLNDKLR+DLLKTTFSEEELAGLQKAF +MDLDGNG IDADELGLVL SFGEAVPPGRLKALIREV Sbjct: 1 MGNWEKLVHPVVRRAYFVNKDTGQASWTTPTEVKFFLNDKLRQDLLKTTFSEEELAGLQKAFAKMDLDGNGTIDADELGLVLKSFGEAVPPGRLKALIREV 101
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Match: A0A7S3ZU83_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU83_9STRA) HSP 1 Score: 175 bits (444), Expect = 5.490e-42 Identity = 175/632 (27.69%), Postives = 259/632 (40.98%), Query Frame = 2 Query: 143 VPSRFKRVLDKATGKHYYYDKETKETFW--------TLAEGPA-------GIQLSTTPEDPRKRRKTYGIPPTDVEAVAQNQRAIIWWKVPGLHGGGERGSGQTGGGARATKTKAAIGGASRKRGSGSVAAEAGFAGDGERGTDNLTPETVGFVVYRYRL-DGRE-WHKKGATHVDGA---KTVSASIKA--------------------------LSNGLVYRFTVASQTTEGVSAESEPSVAVRPNEPLPEGWKEKFNAVTGKSVYTNVKTGQTSSERPECDPFFVETDLFLKFTPEETEALSEEFRTRAEIQSSTMVTIDDVMDILPRIGEPLREVEVVKRLKEGGWEQPGEASASASVSAPGARDLASVTYQQFLALLWGIKGPKVSRRSLGRRLLDVIVASLTPGSVSSKKLALMEQDPGKRMGNWEKLVHP-VARRQYFVNKDTGQASWNTPAEVKFFLNDKLRKDLLKTTFSEEELAGLQKAFGRMDLDGNGCIDADELGLVLNSF-GEAVPPGRLKALIREVDXXXXXXXXXXXFTVMMSAVKKGK--ASLGWGRINKHLQGDDD---RRFDGLKGQFEGIKAMQKATAGSGVGRANHGKFCLCGCRG-----VQPTNEHKVVY 1864 V + + D TGK Y+YD T+E FW LA A G S P + ++ + PP V + A IWWK SR G P GF V R R DG E W KG +VD A K S + KA L+N YRF V S G+S S S R PLPEGWK+ K+ Y NVKT QT+ +RP+ DPF + T++FL+FT +E L + F T + S V++ + LP +GE L +++ + + E S +A A A + F W K R + + + P ++ K +A E + +R+G W K+ HP + Y+VN +TG+ S++TP +K+FL L+++ K ++ELA ++ F MDLDG+G ID EL L++ + GE +L+ ++ EVD F + M +KKGK A +G + K ++ D++ + DG + E K +K R HG +C+CGCR +Q K +Y Sbjct: 3507 VNAEYASETDARTGKVYWYDVCTRERFWDDPRPAQEALAAEIAEFERLHTGDTHSQLPLPLLRAKRGFPEPPRQVSGAGGDASARIWWKP------------------------------SRPNG----------------------PPVKGFSVERQRKRDGLETWEDKGTVYVDAAAQRKADSRAAKAAGRSLTKAELEAARSNQPPCALIVDELANDSWYRFRVYSHNDVGLSTPSNWSNDCRVQRPLPEGWKQVEPPDGSKTYYYNVKTRQTTWDRPDKDPFALPTEVFLQFTSDELTHLQDVF-TDKDYDRSNAVSLREFEAALPALGEVLSPTDLLWLFYQSDLDPSAELSYAAFARAIATLKRARIERAPF----WRWMPAKF------RDMKEFMRRPRVPRAMK-KLVAAKEDEIHERVGAWTKVPHPEIKGSTYWVNPETGETSYDTPEAIKYFLPQALQEEAKKWV-DDDELAEMETQFDAMDLDGSGAIDIGELKLLIRALTGETYSDAKLRGIMYEVDFDRSGEIDFDEFVLAMITLKKGKRGAFSRFGDL-KDIERDENVEALQSDGAHVKLEAAKKSKK--------RYPHGYYCVCGCRALHEGEIQYIKSQKKIY 4064
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Match: A0A7S3JUG7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUG7_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.680e-37 Identity = 122/469 (26.01%), Postives = 205/469 (43.71%), Query Frame = 2 Query: 539 PETVGFVVYRYR-LDGREWHKKGATHVDGAKTVSASIKA--------------------------LSNGLVYRFTVASQTTEGVSAESEPSVAVRPNEPLPEGWKEKFNAVTGKSVYTNVKTGQTSSERPECDPFFVETDLFLKFTPEETEALSEEFRTRAEIQSSTMVTIDDVMDILPRIGEPLREVEVVKRLKEGGWEQPGEASASASVSAPGARDLASVTYQQFLALLWGIKGPKVSRRSLGRRLLDVIVASLTPGSVS----SKKLALMEQDPGKRM--GNWEKLVHPVAR-RQYFVNKDTGQASWNTPAEVKFFLNDKLRKDLLKTTFSEEELAGLQKAFGRMDLDGNGCIDADELGLVLNSF-GEAVPPGRLKALIREVDXXXXXXXXXXXFTVMMSAVKKGKASLGWGRINKHLQGDDDRRFDGLKGQFEGIKAMQKATAGSGVGRANHGKFCLCGCRGVQP 1840 P +G+ V R R +D W KG+ ++D + A +A L++ YRF V + G S S+ S +R + PLP W E +S Y N KT ++S +RPE DP+F+ T+LF++F+ E L E F T + S +++++ LP GE L +++ + + E + + F + +K + R SL RR+LD + +S S +E+D ++ G W + HP R R ++ N TG+ S++ P ++ FF++D +R ++ + L ++ F +D D +G IDA E+ LV+ GE + R++ LIR+ D F +++ +++KGKA W R+ + L R + IKA K R H +C+CGCR + P Sbjct: 190 PPILGYTVERQRCIDNENWRDKGSIYIDSQAQIIADTEAAKAIGKKLAKRKNKITPPPTAVLVDQLADDAKYRFRVYAHNARGKSVASKWSNEIRVSRPLPPAWIEVIPKDGSRSYYYNAKTFESSWQRPESDPYFLPTNLFMQFSAMEISHLKEVF-TVLDHDRSHAISLNEFESCLPEFGEYLSPSDLLWLFYQAHLDAKAE-----------------MNFIAFAQAIDTLKKARAERASLTRRILDHTITHTQKVKMSIFGQSADDIFIERDQAMKLRYGPWRRRRHPEMRSRIFWENTTTGECSYSMPHDIMFFISDDVR---MEANMNSTALKRYEQLFAAVDTDSSGSIDAGEMRLVIQRMTGENLADSRIRGLIRQFDLDRNGSIDFNEFILILISIQKGKAGQQWMRLVQGLDEYRAARSNQADEILRDIKAAAKVHH-----RRRHNPYCVCGCRRIHP 632
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Match: A0A7S0SWW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWW1_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.470e-11 Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 581 GREWHKKGATHVDGAKTVSASIKALSNGLVYRFTVASQTTEGVSAESEPSVAVRPNEPLPEGWKEKFNAVTGKSVYTNVKTGQTSSERPECDPFFVE 871 G+EW KG+ + I+ L+N +Y FT+ ++ +G S+ES PS V PLP GW F++ T + Y N+K+ Q+S ERPE D +F++ Sbjct: 6 GKEWSYKGSIFLGPQDHKQYVIEGLTNDYLYCFTMKAKNVKGSSSESYPSEEVMIEAPLPAGWFRFFDSNTSRFYYANIKSKQSSWERPEKDSYFLD 102 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1655.4437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1655.4437.1 >prot_L-elsbetiae_contig1655.4437.1 ID=prot_L-elsbetiae_contig1655.4437.1|Name=mRNA_L-elsbetiae_contig1655.4437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=570bp ATCVRSSRRRICRSRCVSVTSTRQATSIGSDTAFSRIQQARRSRRRGCAFback to top mRNA from alignment at L-elsbetiae_contig1655:440..7816+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1655.4437.1 ID=mRNA_L-elsbetiae_contig1655.4437.1|Name=mRNA_L-elsbetiae_contig1655.4437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7377bp|location=Sequence derived from alignment at L-elsbetiae_contig1655:440..7816+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1655:440..7816+ >mRNA_L-elsbetiae_contig1655.4437.1 ID=mRNA_L-elsbetiae_contig1655.4437.1|Name=mRNA_L-elsbetiae_contig1655.4437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3420bp|location=Sequence derived from alignment at L-elsbetiae_contig1655:440..7816+ (Laminarionema elsbetiae ELsaHSoW15)back to top |