mRNA_L-elsbetiae_contig16549.4436.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 179 bits (455), Expect = 3.540e-47 Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLARSSPSGDTL-VPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNAS-GLGTGYLDTTDHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLALVK 907 L+IAA+ G++A ++ LLR A+PLL ++SP G+T VPLD AA +GH DVV ELIQE GIEGC S G AL A NQH+++M +LT+AGVVDTGKAL AA G E+S KFL + + + G+ YL+ D G TPL Q C +PRI R+LVDAGADTT+ VQ+ + G VVFNDTPLA K Sbjct: 244 LHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGG-VVFNDTPLAFTK 435
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 153 bits (386), Expect = 4.440e-38 Identity = 95/190 (50.00%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLAR-SSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTTDHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLAL 901 LY AA +G + A ++LL A+ADPLL PSG T +PLDAAA NGH +VV+ELI++ GI+GCGG+SGGV ALQ+A + +++ +M +LT+AGVVDTG AL+ AA +G E+ KFL +Q + Y++T D G TPL IQ RP R+ RLLV+AGADTT+ V + G V + TPL L Sbjct: 152 LYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRP---RVVRLLVEAGADTTSPVAVRNQLGGDDV-SITPLGL 337
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: D8LB36_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI) HSP 1 Score: 149 bits (376), Expect = 1.510e-37 Identity = 96/220 (43.64%), Postives = 134/220 (60.91%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLARSSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGML-TDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTTDHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQLTETES-GMVVFNDTPLALV----KYAGGCSEILFTYTCVFL*PLVSC 976 L IA+ +G A KVLLRA+ DP L +++ SG+ VPL+ A G D V EL + I+GCGG S GV AL A ++HV++M +L TDAGVVDTG ALI AA +G S + L Q+Q++ A+ Y++ G+TPL +IQACRPCS RI RLLVDAGADTT+ V + + + G++ + +A+ K G +I+ T +C P +C Sbjct: 80 LLIASTQGYKDASKVLLRAKVDPQLQQNT-SGNLFVPLNMLATRGDSDAVRELFRHVDIDGCGGPSRGVNALVTAARDKHVDIMVLLLTDAGVVDTGGALITAAHYGGVVSVEHLLQRQKQTAAER-KAYVNAPGLFGATPLLWSIQACRPCSSRIARLLVDAGADTTSTVTMADVQGFGLMAYTPKEIAIRRIRRKKVEGKEDIVATSSCAAWRPSAAC 297
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.590e-37 Identity = 91/190 (47.89%), Postives = 126/190 (66.32%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLARSSPSG-DTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTTDHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLAL 901 LY AA G + A+ +LL A+ADPLL +S SG + +PLD AA NGH +VV+ELI++ GI+GCGG+SGG AL++A +++M +LTDAGVVDTG AL+ AA +G E+ KFL +Q S Y++T + +G T L + IQ CRP R+ +LLV+AGADTT+ V + + G F+ TPL L Sbjct: 152 LYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRP---RVVQLLVEAGADTTSPVLICN-QPGEDDFHITPLGL 337
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.470e-36 Identity = 94/197 (47.72%), Postives = 127/197 (64.47%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLARSSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTG-YLDTTDHLGSTPLANTIQAC----RPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLALVKY 910 L+ A G+L A + LLRA A+PL+ R+ TL+PLD+AA NG+L V+ ELIQ GIEGCGG S G VAL A E + V M +LT AGVVDTG+AL +A GRE+S K+L Q ++ G G Y++ D G+TPL ++I C + PR+ RLLV+AGADTTT ++ T + G+V+F+ TPL L + Sbjct: 138 LFRAMTEGQLEATRELLRANANPLITRAPLP--TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKH---YGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNS-MGVVLFSCTPLKLTVH 328
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 144 bits (363), Expect = 7.900e-35 Identity = 89/177 (50.28%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 377 VLLRAEADPLLARSSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAG-VVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTTDHLGSTPL--ANTIQACRPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLA 898 VLLRA+A+PLL +P G + VPL+ AAL+G+ DV E+I++ GI GCGG SGGV AL++A + +H+E M +L DAG VVDTG ALI AAE GR + KFL ++++ +A G T D G TP+ A + A R CSP+I RLLVDAGA+TT AV +T ++TPLA Sbjct: 163 VLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNG---TRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLA 336
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.050e-34 Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = 2 Query: 392 EADPLLAR-SSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTT-DHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQLTETESGM-VVFNDTPLALVKYA 913 +A+ LLA +PSG T VPLD A +GH +VV EL + G+ GCGG SGGV +L+ AT Q V++MG+LT GVVDTG+AL+ AAE RE S KFL Q Q +G G Y++ T D G TPL TI+AC SPRI R L+DA ADT + V +T+ SG DTPL ++ Sbjct: 155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ----AGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTK--SGQWTTSRDTPLGFATHS 325
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 142 bits (357), Expect = 3.900e-34 Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 2 Query: 386 RAEADPLLARSSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYL---DTTDHLGSTPLANTIQ---ACRPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPL 895 RA+A+PLL + +PSG T VPLD AA G +VV ELI++ I+GCGGASGGV AL+ A +Q+V+VM +L DAGV+DTG+ALI AA E+ K L QQ+ ++G G Y+ DT D +G TPL +I A CSPR+ RLLVDAGADT +AV L T +G + + TP+ Sbjct: 171 RAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAG-GELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGT-AGQIGRSVTPI 344
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 141 bits (356), Expect = 6.620e-34 Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 2 Query: 401 PLLARSSPSGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVVALQRATENQHVEVMGMLTDAGVVDTGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTT-DHLGSTPLANTIQACRPCSPRITRLLVDAGADTTTAVQL 850 PLL SG+T VPLD AALNGHL V EL+Q +GI GC GAS GV AL +A +QH++VM +L DAGVVDTG AL+A GRE + KFL +Q+ + T Y T D G TPL + + PCSPR+ RLLVDAGAD T AV++ Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTA--RTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRV 317
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 131 bits (330), Expect = 6.090e-31 Identity = 94/199 (47.24%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 335 LYIAADRGRLAAIKVLLRAEADPLLARSSP-SGDTLVPLDAAALNGHLDVVDELIQEYGIEGCGGASGGVV-ALQRATENQHVEVMGMLTDAGVVD-TGKALIAAAEWGRESSPKFLSQQQERNASGLGTGYLDTT-DHLGSTPLANTIQAC--RPCSPRITRLLVDAGADTTTAVQLTETESGMVVFNDTPLALVKYA 913 LYIAA +G L A+KVLL A+A+PLL RSS SG + VPL+ AA G VV EL++E+GI CGG SG ++ AL+ A V++M ++ AGVVD G AL+AA G+E++ FL +QQ+ T Y++T D G T L + +PC+PRITR LVDAGADTT+ VQL E N TPL V A Sbjct: 16 LYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQER---WQTSYVNTACDDDGLTALLWSFGGNNNKPCNPRITRRLVDAGADTTSTVQL-RAERSRTRVNMTPLEYVNEA 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16549.4436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16549.4436.1 >prot_L-elsbetiae_contig16549.4436.1 ID=prot_L-elsbetiae_contig16549.4436.1|Name=mRNA_L-elsbetiae_contig16549.4436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp MEPTVNDRQQRCYRPALGGSTGPPGGDKAAGEGRRGPGSKGQYFKHLTASback to top mRNA from alignment at L-elsbetiae_contig16549:2286..3639+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16549.4436.1 ID=mRNA_L-elsbetiae_contig16549.4436.1|Name=mRNA_L-elsbetiae_contig16549.4436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1354bp|location=Sequence derived from alignment at L-elsbetiae_contig16549:2286..3639+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16549:2286..3639+ >mRNA_L-elsbetiae_contig16549.4436.1 ID=mRNA_L-elsbetiae_contig16549.4436.1|Name=mRNA_L-elsbetiae_contig16549.4436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig16549:2286..3639+ (Laminarionema elsbetiae ELsaHSoW15)back to top |