mRNA_L-elsbetiae_contig1654.4432.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A6H5K149_9PHAE (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K149_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 8.190e-144 Identity = 208/259 (80.31%), Postives = 233/259 (89.96%), Query Frame = 3 Query: 555 MYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLLPVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQNPSTDVDCDELLTQSPTVSADASSSWIIATAVGASIFIILAATLVALW 1331 MYNIDLF DA T EIE LRDRDV+VICSFSAGTFEEGR D+D+FE WLG E+G GERWLNITAEG+L VM AR++LA NKSC GVEP+N+Q +LEENSGFN T SD LTYNTWLAGQAHDRNLSVGLRNDW QLD LEP+FDWALSEDCLFQGEC AY+PNF++AGKAVL+VEYFQFDLAFCD++T+ GLD+I+KDLSLDARRCSCQNPST +DCDELLTQSPTV+AD+SSSW+IATAVGAS+FIILAATLV LW Sbjct: 1 MYNIDLF-DAATGEIEELRDRDVVVICSFSAGTFEEGRIDSDDFESDWLGGGVEDGFEGERWLNITAEGVLTVMRARLDLATNKSCHGVEPSNVQVYLEENSGFNITASDQLTYNTWLAGQAHDRNLSVGLRNDWLQLDDLEPSFDWALSEDCLFQGECGAYEPNFISAGKAVLDVEYFQFDLAFCDNVTASGLDIIIKDLSLDARRCSCQNPSTHIDCDELLTQSPTVAADSSSSWVIATAVGASLFIILAATLVGLW 258
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: D8LHZ6_ECTSI (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ6_ECTSI) HSP 1 Score: 315 bits (807), Expect = 2.070e-102 Identity = 153/202 (75.74%), Postives = 169/202 (83.66%), Query Frame = 3 Query: 447 LLLFASASAQGWWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLLPVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNF 1052 LLL A+ +A WWKPGPGVSWQ+QLAG IDLS+DVDMYNIDLF DA T EIE LRDRDV+VICSFSAGTFEEGR D+D+FE WLG E+G GERWLNITAEG+L VM AR++LA NKSC GVEP+N+Q +L ENSGFN T SD LTYNTWLAGQAHDRNLSVGLRNDW QLD LEP+FDWALSEDCLFQGEC + F Sbjct: 57 LLLDAAVAAGDWWKPGPGVSWQMQLAGEIDLSVDVDMYNIDLF-DAATSEIEELRDRDVVVICSFSAGTFEEGRLDSDDFESDWLGGGVEDGFEGERWLNITAEGVLTVMTARLDLATNKSCQGVEPSNVQVYLNENSGFNITASDQLTYNTWLAGQAHDRNLSVGLRNDWLQLDDLEPSFDWALSEDCLFQGECGLFSVKF 257
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A7X9DZE3_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9DZE3_9DELT) HSP 1 Score: 215 bits (548), Expect = 1.030e-62 Identity = 118/237 (49.79%), Postives = 149/237 (62.87%), Query Frame = 3 Query: 483 WKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLLPVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLA--FCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 W+P PG +WQ QL+G ID S DV MY+IDLF + I L IVIC FSAG++E RPD D+F P LGE + G ERWL++ A+ L P+M R++LAV K CDGVEP N+ + + NSGF T +D L YN +LA +AH RNLSVGL+ND Q+ QL FDWAL E+C EC+ P F+ AGKAV VEY LA C +L D ++K+L LDA R SC+ Sbjct: 89 WRPAPGTNWQWQLSGTIDTSFDVVMYDIDLF-ETPAATIADLHAAGRIVICYFSAGSYENFRPDKDDFPPEILGEVMD-GWPDERWLDVRAQALRPIMQRRLDLAVQKGCDGVEPDNVDGY-QNNSGFPLTAADQLAYNRFLASEAHARNLSVGLKNDLDQVPQLVADFDWALDEECFAYDECDTLLP-FIRAGKAVFQVEYGSASLAATVCPQANALNFDTLIKNLDLDAWRVSCR 321
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE) HSP 1 Score: 212 bits (539), Expect = 4.710e-62 Identity = 123/264 (46.59%), Postives = 157/264 (59.47%), Query Frame = 3 Query: 399 GMTTRLGAASSPLVLLLLLFASASAQGWWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLL-PVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 G+ L S VL+ L A WW+P PGVSWQ QL+G +D LDVDMY++DLF D + I LL+ + VIC SAG++E R DA+ F LG+ + G ERWL+I+ +L P+M RM+LAV K CDG+EP NI + + SGF T + LTYN WLA AH RNLS+GL+ND Q+ L FDWAL+E C EC+ P FV AGKAV VEY FC S+ D + K+LSLD+ R SC+ Sbjct: 10 GLFCMLCTVSMADVLVPYLPAYIHGSSWWQPKPGVSWQWQLSGTLDTDLDVDMYDVDLF-DTSASMISLLKSQGKKVICYMSAGSWENYRDDANVFPEEVLGKYLD-GWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNIDGYSND-SGFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLP-FVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSCR 269
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A7V5U264_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Thermodesulfatator atlanticus TaxID=501497 RepID=A0A7V5U264_9BACT) HSP 1 Score: 211 bits (536), Expect = 1.950e-61 Identity = 116/240 (48.33%), Postives = 150/240 (62.50%), Query Frame = 3 Query: 468 SAQGWWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLL-PVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSC 1184 S++ W+P PG +WQ QL G ID SL +M+++DLF + + IE L +VIC FSAGT+E RPDA++F LGE + ERWL+I +L P+M AR++LAV K CDGVEP N+ A+ E SGF T D L YN WLA QAH R LSVGL+ND Q+ LEP FDWAL+E+C + GECE +P F+ GKAV VEY+ FC ++G + K LDA R +C Sbjct: 43 SSKKIWRPSPGTTWQWQLTGEIDTSLKAEMFDVDLF-ETPPEVIEELHRLGKVVICYFSAGTYEPWRPDAEKFPEEILGEPLVDWPD-ERWLDIRRLDVLGPIMEARLDLAVEKGCDGVEPDNVDAYQNE-SGFPLTYEDQLNYNLWLAEQAHKRGLSVGLKNDLDQIPALEPYFDWALNEECFYYGECEKLRP-FIEKGKAVFQVEYYLDPEDFCPEANAMGFSSMKKRPELDAWRIAC 278
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A7C2TI21_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2TI21_9CHLR) HSP 1 Score: 208 bits (530), Expect = 1.260e-60 Identity = 121/250 (48.40%), Postives = 151/250 (60.40%), Query Frame = 3 Query: 441 LLLLLFASASAQGWWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLL-PVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 +L L + +A+ W+P PG SWQ QL G + + DV+MY+IDLF D I+ L +VIC FSAG++EE RPDA +F P LG+ E G ERWL+I LL P+M AR++ AVNK CDGVEP N+ + + +GF T D L YN WLA QAH R LSVGL+ND Q+ QL PAFDWAL+E C EC P FV AGKAV VEY FC ++ D + K LDA R SC+ Sbjct: 31 ILYLPYIGYNAKDHWQPRPGTSWQWQLTGTVVTTFDVNMYDIDLF-DVPRSVIDELHADGRVVICYFSAGSWEEWRPDARQFPPSLLGKPLE-GWPDERWLDIRRLDLLGPLMEARLDRAVNKGCDGVEPDNVDGYAND-TGFKLTFQDQLDYNRWLAAQAHARGLSVGLKNDMDQVTQLLPAFDWALNEQCFQYNECHLLVP-FVQAGKAVFGVEYELEPAEFCLQAIAMNFDWLRKKWELDAWRRSCR 276
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A6L3F7Y4_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F7Y4_9CHLR) HSP 1 Score: 209 bits (531), Expect = 1.410e-60 Identity = 116/236 (49.15%), Postives = 145/236 (61.44%), Query Frame = 3 Query: 483 WKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLL-PVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 W+P PGVSWQ QL G ID S DV+MY+IDLF D I+LL + IVIC FSAG++E R DA +F LG + G ERWL++ A L P+M AR++LAV+K CDGVEP N+ + + SGF T D L YN WLA AHDRNLS+GL+ND Q+ L +DWAL+E C ECE +P F AGKAV VEY FC +L D ++K+L L R SC+ Sbjct: 60 WQPSPGVSWQWQLTGEIDTSFDVEMYDIDLF-DTPQSTIDLLHENGRIVICYFSAGSYENWRSDAGQFPASVLGNTLD-GWPDERWLDVRAISQLEPIMMARLDLAVSKGCDGVEPDNMDGYSND-SGFPLTGQDQLDYNIWLASAAHDRNLSIGLKNDLDQIPDLVSYYDWALNEQCYQYNECELLRP-FTNAGKAVFGVEYQGNSAQFCPYFNNLDFDWLLKELDLGPTRTSCR 291
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A1F8SXS9_9CHLR (Glyco_hydro_114 domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_55_16 TaxID=1797669 RepID=A0A1F8SXS9_9CHLR) HSP 1 Score: 206 bits (524), Expect = 8.950e-60 Identity = 119/236 (50.42%), Postives = 144/236 (61.02%), Query Frame = 3 Query: 483 WKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITA-EGLLPVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 W+P PG SWQ QL G ID S DV MY+IDLF DA ++ L +VIC FSAG++EE RPDAD F G E+ GE+WL+I E L P+M AR++LAV K CDGVEP N+ + + SGF T LTYNTWLA QAH R LSVGL+ND Q++ L P FDWAL+E C EC P FV AGKAV VEY AFC ++ D + K LDA R +C+ Sbjct: 42 WRPAPGTSWQWQLTGMIDTSFDVQMYDIDLF-DALQSTVDQLHTDGRVVICYFSAGSWEEWRPDADLFPDSVKGNSLEDWP-GEKWLDIRQMEVLGPIMTARLDLAVKKGCDGVEPDNVDGYTND-SGFPLTGQHQLTYNTWLAEQAHARWLSVGLKNDLDQVEVLLPYFDWALNEQCFQYNECGTLLP-FVHAGKAVFGVEYELEQEAFCPQANAMDFDFLKKRWELDAWRVACR 273
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 207 bits (526), Expect = 2.550e-59 Identity = 119/239 (49.79%), Postives = 152/239 (63.60%), Query Frame = 3 Query: 477 GWWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLLPVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLA--FCDSLTSLGLDVIVKDLSLDARRCSCQ 1187 G W+P PG WQ QL+G ID SLDVDMY+IDLF DA I+ LR R V VIC FSAG+ E+ R DA +F P +GE + G GERWL+I + + +M AR++ AV + CDGVEP N+ A+ + SGF T + L YN +LA +AH R LSVGL+ND +Q++ L FDWAL E+C EC+ +P FVAAGKAV VEY LA C +L D ++K L LDA R C+ Sbjct: 98 GVWRPAPGTRWQWQLSGPIDDSLDVDMYDIDLF-DAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLD-GWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYAND-SGFPLTAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDECDLLRP-FVAAGKAVFQVEYGDASLAADVCPRANALDFDTLIKRLDLDAWRIPCR 332
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Match: A0A1F8R4I6_9CHLR (Glyco_hydro_114 domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_16_58_14 TaxID=1797654 RepID=A0A1F8R4I6_9CHLR) HSP 1 Score: 205 bits (522), Expect = 3.120e-59 Identity = 110/238 (46.22%), Postives = 148/238 (62.18%), Query Frame = 3 Query: 480 WWKPGPGVSWQLQLAGNIDLSLDVDMYNIDLFADATTDEIELLRDRDVIVICSFSAGTFEEGRPDADEFEPLWLGEEKEEGSSGERWLNITAEGLL-PVMGARMELAVNKSCDGVEPTNIQAFLEENSGFNTTESDHLTYNTWLAGQAHDRNLSVGLRNDWQQLDQLEPAFDWALSEDCLFQGECEAYQPNFVAAGKAVLNVEYFQFDLAFCDSLTSLGLDVIVKDLSLDARRCSCQN 1190 WW+P P SWQ QL+G ID SLDV MY+IDLF +A + I+ L +VIC FSAG++E+ RPDA +F +G+ E G GE+WL+ LL P+M AR++LAV K CDGVEP N+ + + +GF + +D + YNTWLA QAH R LS+GL+ND Q+ L P FDWAL+E+C EC+ P F+ + KAV VEY FC ++ + K+ LDA R CQ+ Sbjct: 58 WWQPAPDTSWQWQLSGTIDTSLDVQMYDIDLF-EAPQEAIDTLHSDGRVVICYFSAGSWEDWRPDAADFPAEVIGDPLE-GWPGEKWLDTRRLDLLGPIMQARLDLAVQKGCDGVEPDNVDGYANQ-TGFPLSYADQIAYNTWLAQQAHARGLSIGLKNDLDQIGDLLPLFDWALNEECFTYNECDLLLP-FIESHKAVFGVEYELEPADFCPQANAMHFSFLKKNWDLDAWRVDCQD 291 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1654.4432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1654.4432.1 >prot_L-elsbetiae_contig1654.4432.1 ID=prot_L-elsbetiae_contig1654.4432.1|Name=mRNA_L-elsbetiae_contig1654.4432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=344bp MGKGKKRLKPGMTTRLGAASSPLVLLLLLFASASAQGWWKPGPGVSWQLQback to top mRNA from alignment at L-elsbetiae_contig1654:2198..13361+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1654.4432.1 ID=mRNA_L-elsbetiae_contig1654.4432.1|Name=mRNA_L-elsbetiae_contig1654.4432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11164bp|location=Sequence derived from alignment at L-elsbetiae_contig1654:2198..13361+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1654:2198..13361+ >mRNA_L-elsbetiae_contig1654.4432.1 ID=mRNA_L-elsbetiae_contig1654.4432.1|Name=mRNA_L-elsbetiae_contig1654.4432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2064bp|location=Sequence derived from alignment at L-elsbetiae_contig1654:2198..13361+ (Laminarionema elsbetiae ELsaHSoW15)back to top |