mRNA_L-elsbetiae_contig165.4406.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: D8LFM0_ECTSI (Peptidyl prolyl cis/trans isomerase like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM0_ECTSI) HSP 1 Score: 154 bits (390), Expect = 7.830e-45 Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GFVNLPLS+FEEW KLSGEGA+LDAEKDTV+MCHHGMRSNQMAQHL+TKAGFK+VWNVEGGLHAYASHVDSSVGVY Sbjct: 232 GFVNLPLSKFEEWSDKLSGEGAILDAEKDTVIMCHHGMRSNQMAQHLATKAGFKRVWNVEGGLHAYASHVDSSVGVY 308
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: U5QRK1_9CYAN (tRNA s(4)U8 sulfurtransferase n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QRK1_9CYAN) HSP 1 Score: 87.0 bits (214), Expect = 1.780e-20 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 4 FVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 F+NLPLSQ++EW +L A+LD K+T+V+CHHGMRS M +L + GF V NV+GG+HAYA +VD SV Y Sbjct: 41 FINLPLSQYQEWSPRLD---AILDPAKETIVLCHHGMRSADMCSYL-LRRGFNNVKNVQGGIHAYALYVDQSVPQY 112
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: A0A4D9D039_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D039_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.150e-20 Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSK-LSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF+NLPLSQF EW K LSGE +LD +K TVV+CHHG RS Q A L+++AGF +V+N+ GG+H YA VDS + Y Sbjct: 147 GFLNLPLSQFAEWRPKILSGE--LLDKDKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 222
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: W7TMS8_9STRA (Peptidyl-prolyl cis-trans isomerase c n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMS8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.700e-20 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSK-LSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSV 222 GF+NLPLSQF EW K LSGE +LD K TVV+CHHG RS Q A L+++AGF +V+N+ GG+H YA VDS + Sbjct: 37 GFLNLPLSQFAEWRPKILSGE--LLDKNKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRI 109
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: S8D8K8_9LAMI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D8K8_9LAMI) HSP 1 Score: 88.2 bits (217), Expect = 8.280e-20 Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF LPL QF +WG +S E D EKDT V+CHHGMRS Q+AQ L T+ GFK+V+NV GG+H YA VD S+ VY Sbjct: 149 GFKVLPLRQFAKWGPVISSE---FDPEKDTYVLCHHGMRSLQVAQWLQTQ-GFKRVFNVSGGIHEYAVKVDESIPVY 221
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: A0A067EI79_CITSI (Rhodanese domain-containing protein (Fragment) n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067EI79_CITSI) HSP 1 Score: 84.0 bits (206), Expect = 1.170e-19 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF LPL QF WG ++ + D +KDT VMCHHGMRS Q+AQ L T+ GF++V+NV GG+HAYA+ VD S+ Y Sbjct: 7 GFQVLPLRQFGSWGPDITVK---FDPQKDTYVMCHHGMRSLQVAQWLQTQ-GFRRVFNVSGGIHAYATKVDPSIPTY 79
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: I2CR14_NANGC (Peptidyl prolyl cis trans isomerase like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR14_NANGC) HSP 1 Score: 89.0 bits (219), Expect = 1.820e-19 Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSK-LSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF+NLPLSQF EW K LSGE +LD K TVV+CHHG RS Q A L+++AGF +V+N+ GG+H YA VDS + Y Sbjct: 236 GFLNLPLSQFAEWRPKILSGE--LLDKNKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 311
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: Q7NDT3_GLOVI (Gll4149 protein n=2 Tax=Gloeobacter violaceus TaxID=33072 RepID=Q7NDT3_GLOVI) HSP 1 Score: 83.6 bits (205), Expect = 5.400e-19 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF+NLPLS ++EW +L G +LD +K+T+V+CHHGMRS M L + G++ V NV+GG+HAY+ +VD +V Y Sbjct: 50 GFINLPLSHYQEWSMRL---GEILDPQKETIVLCHHGMRSADMCSFL-LRRGYENVKNVQGGIHAYSLYVDPNVPRY 122
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: UPI0016805816 (rhodanese-like domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI0016805816) HSP 1 Score: 83.2 bits (204), Expect = 5.880e-19 Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 1 GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 GF NLPLSQF EW ++ LD EK+T+V+CHHGMRS QM Q L+T+ GF V N+EGG+ AYA VD SV Y Sbjct: 41 GFKNLPLSQFAEWSGQIHTR---LDPEKETLVLCHHGMRSAQMCQWLNTQ-GFTNVKNIEGGIDAYAIVVDPSVPRY 113
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Match: A0A7S3H476_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H476_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.760e-19 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 7 VNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKAGFKKVWNVEGGLHAYASHVDSSVGVY 231 ++LPLS W K+ G++LD EK T+ +CHHG+RS Q+A L +KA F VWNVEGG+ AYA VD S+G Y Sbjct: 83 IHLPLSDSNSWSQKVL-TGSLLDPEKPTLCLCHHGVRSMQVASFLVSKAEFDHVWNVEGGIDAYAEQVDPSIGFY 156 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig165.4406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig165.4406.1 >prot_L-elsbetiae_contig165.4406.1 ID=prot_L-elsbetiae_contig165.4406.1|Name=mRNA_L-elsbetiae_contig165.4406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp GFVNLPLSQFEEWGSKLSGEGAVLDAEKDTVVMCHHGMRSNQMAQHLSTKback to top mRNA from alignment at L-elsbetiae_contig165:52409..53029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig165.4406.1 ID=mRNA_L-elsbetiae_contig165.4406.1|Name=mRNA_L-elsbetiae_contig165.4406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=621bp|location=Sequence derived from alignment at L-elsbetiae_contig165:52409..53029- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig165:52409..53029- >mRNA_L-elsbetiae_contig165.4406.1 ID=mRNA_L-elsbetiae_contig165.4406.1|Name=mRNA_L-elsbetiae_contig165.4406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig165:52409..53029- (Laminarionema elsbetiae ELsaHSoW15)back to top |