mRNA_L-elsbetiae_contig16176.4245.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D7FGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY2_ECTSI) HSP 1 Score: 511 bits (1316), Expect = 1.590e-172 Identity = 308/472 (65.25%), Postives = 310/472 (65.68%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDEVPEWAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRVGEAFASVSNNGXXXXXXXXXXXXXXXXXXXXKTGRTGIAGIGRILKCRFAGGRRFRPARSRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESEE 1416 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQ+N+EYHLLLEESFVD TDEEEAVPGTSDLETSDGTDEVPE AVAVDVAGTEASDGGSMPSAQSS SGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRS PWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEE TQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESEE Sbjct: 136 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQINQEYHLLLEESFVDVTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSMPSAQSSGSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSQPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEE-------------------------------------------------------------------------------------------------------------------------------------------------------------TQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESEE 450
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D8LK60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK60_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 6.240e-160 Identity = 259/282 (91.84%), Postives = 267/282 (94.68%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDEVPEWAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEEVQQTI 846 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEF+M E YHLLL+E FVDGTDEEEAVPGTSD ETSDGTDEVPE AV VDVAGTEASDGGS P A+SSDSGGGDSDLGARGAFGE+AE VKAATRVSSKRSHPWDD+EYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLET+LAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXX EAGEE + + Sbjct: 134 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFEMEEGYHLLLDEGFVDGTDEEEAVPGTSDSETSDGTDEVPESAVVVDVAGTEASDGGSTPCAESSDSGGGDSDLGARGAFGENAE---VKAATRVSSKRSHPWDDDEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXEAGEEERSRV 412
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 1.530e-157 Identity = 261/282 (92.55%), Postives = 271/282 (96.10%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDEVPEWAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEEVQQTI 846 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISS+ECPMMLHDGYGHFKALIPLRRMPLEF+M EEYHLLL+E FVDGTDEEEAVPGTSD ETSDGTDEVPE AVAVDVAGTEASDGGS PS +SSDSGGGDSDLGARGAFGE+AEGEEVKAATR+SSKRSHPWDD+EYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLET+LAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXX AGEE + + Sbjct: 78 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSQECPMMLHDGYGHFKALIPLRRMPLEFEMEEEYHLLLDEGFVDGTDEEEAVPGTSDSETSDGTDEVPESAVAVDVAGTEASDGGSTPSPESSDSGGGDSDLGARGAFGENAEGEEVKAATRLSSKRSHPWDDDEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXXAGEEERSRV 359
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D7FVQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ8_ECTSI) HSP 1 Score: 469 bits (1208), Expect = 8.070e-154 Identity = 259/282 (91.84%), Postives = 261/282 (92.55%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDEVPEWAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEEVQQTI 846 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECP MLHDGYGHFKALIPLRRMP EYHLLLEESFVDGTDEEEAVPGTSDL DEV E AVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXX EAGEE + + Sbjct: 123 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPTMLHDGYGHFKALIPLRRMP-------EYHLLLEESFVDGTDEEEAVPGTSDLXXXXXXDEVTESAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXEAGEEERSRV 397
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: A0A6H5JVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ6_9PHAE) HSP 1 Score: 332 bits (852), Expect = 1.210e-107 Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDEVPEWAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYY 555 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEEC MMLHDGYGHFKALIPLRRMPLEF+M+EEY LLL+E FVDG DEEEAV GTSD ETSDGTDEVPE AVAVDVAGTEASDGGS PSA+SSDSGGGDSDLGARGAFGEDAEGEEVKAAT VSSKRSHPWDD+EYWD DANY+ Sbjct: 136 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECSMMLHDGYGHFKALIPLRRMPLEFEMDEEYRLLLDEGFVDGADEEEAVLGTSDSETSDGTDEVPESAVAVDVAGTEASDGGSTPSAESSDSGGGDSDLGARGAFGEDAEGEEVKAATGVSSKRSHPWDDDEYWDHDANYF 320
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: A0A6H5JW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW77_9PHAE) HSP 1 Score: 223 bits (568), Expect = 6.310e-64 Identity = 158/287 (55.05%), Postives = 164/287 (57.14%), Query Frame = 1 Query: 553 YSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRVGEAFASVSNNGXXXXXXXXXXXXXXXXXXXXKTGRTGIAGIGRILKCRFAGGRRFRPARSRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESE 1413 +SGCTIVGEDGWTLVGKEGRRMGLET+LAFDE PLFLDHDDETDENEAAEVDEAVD+VGE XXXXXXXXXXXXXAEAGEE+QQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAA+T TTVLLR+GEAFAS GR KRDRRPAGGVFAPGWAPDPAP A NDSARESE Sbjct: 12 FSGCTIVGEDGWTLVGKEGRRMGLETSLAFDE--------------PLFLDHDDETDENEAAEVDEAVDKVGEDXXXXXXXXXXXXXAEAGEELQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAMTFTTVLLRIGEAFAS--------------------------------------------------------------------------------------------------------GRLKRDRRPAGGVFAPGWAPDPAPTAHNDSARESE 180
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D7FR94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR94_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.170e-36 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1 Query: 1 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMP 198 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECPMMLHDGYGHFKALIPLRRMP Sbjct: 123 TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMP 188
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Match: D8LPN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN8_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.930e-16 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 4 GYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMNEEYHLLLEESFVDGTDEEEAVPGTSDLETSDGTDE 321 G DGRA L+ K L L G RIVKH++G L PCD G P+ S CPM+LHDGYGHFKAL+ R + E TDE+EA+ T++ E++ G DE Sbjct: 113 GQFDGRAFLLMGKVLPLDGIRIVKHDNGILAPCDVGVPLPSGHCPMVLHDGYGHFKALLHFRETSESEASGGDSDG--EXXXXXXTDEDEAMSETTESESTGGADE 216 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16176.4245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16176.4245.1 >prot_L-elsbetiae_contig16176.4245.1 ID=prot_L-elsbetiae_contig16176.4245.1|Name=mRNA_L-elsbetiae_contig16176.4245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=511bp TGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHback to top mRNA from alignment at L-elsbetiae_contig16176:1650..3875- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16176.4245.1 ID=mRNA_L-elsbetiae_contig16176.4245.1|Name=mRNA_L-elsbetiae_contig16176.4245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig16176:1650..3875- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16176:1650..3875- >mRNA_L-elsbetiae_contig16176.4245.1 ID=mRNA_L-elsbetiae_contig16176.4245.1|Name=mRNA_L-elsbetiae_contig16176.4245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3066bp|location=Sequence derived from alignment at L-elsbetiae_contig16176:1650..3875- (Laminarionema elsbetiae ELsaHSoW15)back to top |