mRNA_L-elsbetiae_contig1604.4164.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1604.4164.1
Unique NamemRNA_L-elsbetiae_contig1604.4164.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: D7FKD7_ECTSI (Molecular chaperone, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD7_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 3.120e-95
Identity = 201/453 (44.37%), Postives = 257/453 (56.73%), Query Frame = 1 
Query:  409 WEVLACAGFQLPQSFDASSPLGGLGHLQLMRHQVHFRPCREKAATVHPSTDIEGLVSLTLEEAFSGKDVSVKVQQRVPCPACHGFGATSFVSCDRCSGSGKRLHDVHLTDAEDAPTRDSCSSRYHGVGTVTVENTGVHHGGGRSSNSNSTCPHVKQNHTGTGKNA-----RGGIGG---------LGEVACNSQNTLYNLTDGTFRK---EEAVREGAKVKEDANATG----LKLIHTVDCAQCKGSGKIPAPWNNGRRG-YCTRCAGARFVEAEAELVLSIPAGVEKGHTEVYEDKGHVDLSHLIDGLQQNAAAEQAAVGGETDAKPSKARGSAPASSPXXXXLDSTPSASNKSFLASTAR------------------------------KEKIKTGDFRLTVDVLPHPVFSRGSDG-ADLYTSVAISLDEALTGFTREIVTLDGSVVAVR 1608
            WEVLACAGF LP++FD  S LGGLGH  L R  +       + ATV  STDIEGLVS+TLEEAF GKDV+V +++RVPCP CHG+GA SFV CDRC GSG+R+HD+ L+ ++D P R S     HG            +G GRS  S    PH   N TG+   +     RGG+GG          G V+CN +      +D   R+   E+   E A   +D +  G    L+L  T DCA+C GSG +P P  +G    +C+RC GARFVE   EL+LSIPAG+E GHTEVY  +GHVDL  L+D L+   ++E+A++    DA   KA G +PA  P         S+ N  + + T                                K+K+K G+FRLTVDVLPHPVFS   +G ADL+ +V+IS+ EALTGFTREI  LDGS+V VR
Sbjct:   37 WEVLACAGFPLPKTFDVVSSLGGLGHFGLSRGALGRGLTGLQEATVKQSTDIEGLVSITLEEAFVGKDVAVNIRRRVPCPECHGYGAASFVPCDRCGGSGRRIHDISLS-SDDTPPR-SVPVMEHGA-----------NGCGRSGESREGGPHT--NSTGSACVSHECGHRGGLGGGIYRGSGCHAGHVSCNGK------SDPPCRRPEGEDVCVERAATDDDNDEGGDAERLRLTRTADCARCGGSGMVPTPSTDGGPPLFCSRCTGARFVEETVELLLSIPAGIENGHTEVYRGEGHVDLGDLLDTLKPRVSSEEASM---DDADTGKASGPSPAPPPCSSRPYQGASSINSQWASPTLSPSXXXXXXXXXXXXXXXXXXXRGDFYASPPKKKLKMGNFRLTVDVLPHPVFSPTEEGGADLHATVSISVAEALTGFTREITGLDGSIVTVR 465
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A6H5J983_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J983_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 3.900e-87
Identity = 195/473 (41.23%), Postives = 250/473 (52.85%), Query Frame = 1 
Query:  409 WEVLACAGFQLPQSFDASSPLGGLGHLQLMRHQVHFRPCREKAATVHPSTDIEGLVSLTLEEAFSGKDVSVKVQQR-----------------VPCPACHGFGATSFVSCDRCSGSGKRLHDVHLTDAEDAP---------TRDSCSSRYHGVGTVTVENTGVHHGGGRSSNSNSTCPHVKQNHTGTGKNARGGIGG---------LGEVACNSQNTLYNLTDGTFRK---EEAVREGAKVKEDANATG----LKLIHTVDCAQCKGSGKIPAPWNNGRRG-YCTRCAGARFVEAEAELVLSIPAGVEKGHTEVYEDKGHVDLSHLIDGLQQNAAAEQAAVGGETDAKPSKARGSAPA-----------------------------SSPXXXXLDSTPSASNKSFLASTARKEKIKTGDFRLTVDVLPHPVFSRGSDG-ADLYTSVAISLDEALTGFTREIVTLDGSVVAVR 1608
            WEVLAC GF LP++FD  S LGGLGH +L R  +       + ATV  STDIEGLVS+TLEEAF GKDV+V +++R                 VPCP CHG+GA SFV CDRC GSG+R+HD+ L+  + +P          R   SS   G G     +TG            S C   +  H       R G+GG          G V+CN +      +D   R+   E+   E A   ++ +  G    L+L  T DCA+C GSG +P P  +G    +C+RC GARFVE    LVL+IPAGV+ GHTEVY  +GHVD   L+D  +  A++E+A +   +DA   KA GS+PA                             SSP   X     S S      ++  K K+KTG+FRLTVDVLPHPVFS   +G ADL+ +V+IS+ EALTGFTREI  LDGS+V VR
Sbjct:   37 WEVLACVGFPLPKAFDVVSSLGGLGHFELSRGALGRGLTGLQEATVKQSTDIEGLVSITLEEAFVGKDVAVDIRRRSAKPQTLISPICSLFFKVPCPECHGYGAASFVPCDRCGGSGRRIHDISLSSEDTSPRSIPVMEHGARGCGSSGESGEGDPNTNSTG------------SACVAHECGH-------RDGLGGGVYRGSGCYAGHVSCNGE------SDPPCRRPEGEDVCVERAATDDNNDEGGAAERLRLTRTADCARCGGSGMVPTPSADGGPPLFCSRCTGARFVEETVNLVLTIPAGVKNGHTEVYRGEGHVDFGDLLDTQKPRASSEEANM---SDADAGKASGSSPAPPPCSSRPYEGASSIKSQWASPTFSPSSSSSPFSPXXXXXXSESTPGGFYASPPKTKLKTGNFRLTVDVLPHPVFSPAEEGGADLHATVSISVAEALTGFTREITGLDGSIVTVR 481
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A834PEB8_VESPE (J domain-containing protein n=10 Tax=Vespidae TaxID=7438 RepID=A0A834PEB8_VESPE)

HSP 1 Score: 64.3 bits (155), Expect = 2.990e-7
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1 
Query: 1447 GDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMP 1665
            GD  L +   PHPVF R  D  DLYT+V IS+ +AL GF+ +I+ LDG  V ++R   T PG  +R  G GMP
Sbjct:  237 GDLILKIKTDPHPVFERIGD--DLYTNVTISMQDALIGFSMDIIHLDGRKVTIQRDKITRPGARIRKKGEGMP 307
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A0C9QP73_9HYME (DNAJB11 protein n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9QP73_9HYME)

HSP 1 Score: 63.5 bits (153), Expect = 4.450e-7
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 1 
Query: 1447 GDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMP 1665
            GD  + +   PHPVF R  D  DLYT++ ISL +AL GFT +I+ LDG  V + R   T PG  +R  G GMP
Sbjct:  237 GDLIVRIRTQPHPVFERLGD--DLYTNITISLQDALIGFTLDIIHLDGHKVTIIRDKVTKPGARMRKKGEGMP 307
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A0D1Z8H0_9PEZI (J domain-containing protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D1Z8H0_9PEZI)

HSP 1 Score: 63.5 bits (153), Expect = 4.870e-7
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 1 
Query: 1444 TGDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMP 1665
            T D    V+  PHP  SR  DG D+ TSV I L EALTG++R++ T+DG  + V  +  T P     FPGLGMP
Sbjct:  266 TQDLHFIVEEKPHPTLSR--DGDDIKTSVEIDLKEALTGWSRQVTTIDGKQLRVGSSGPTPPTWTETFPGLGMP 337
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A078ANN8_STYLE (Domain containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ANN8_STYLE)

HSP 1 Score: 63.2 bits (152), Expect = 6.730e-7
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1 
Query: 1438 IKTGDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMPM 1668
            ++ G+  + V+ LPH VF R   G DL T+V I+L +AL GF +E + LDG  V ++RT  T PG + +  G GMP+
Sbjct:  260 VRAGEVTVKVETLPHKVFERA--GNDLKTTVKITLKQALLGFEKEFIHLDGRSVIIKRTKITKPGEIEKIRGEGMPV 334
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A834Y5L2_9HYME (J domain-containing protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y5L2_9HYME)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-6
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 1 
Query: 1447 GDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMP 1665
            GD  L +   PHPVF R  D  DLYT++ ISL +AL GFT +IV LDG  V + R   T  G  ++  G GMP
Sbjct:  241 GDLILKIRTQPHPVFQRVGD--DLYTNITISLQDALVGFTLDIVHLDGHKVTITRDKVTRHGARMKKKGEGMP 311
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A182JUE2_9DIPT (J domain-containing protein n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182JUE2_9DIPT)

HSP 1 Score: 62.8 bits (151), Expect = 1.920e-6
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1 
Query: 1447 GDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMP 1665
            GD  L +  +PH  F R  D  DLYT++ ISL +AL GFT +IV LDG  V V R   T PG  +R  G GMP
Sbjct:  238 GDLILKIKTVPHTRFERRGD--DLYTNITISLQDALVGFTLDIVHLDGHKVTVTREKVTWPGARIRKNGEGMP 308
[Close]
BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: U4LRL5_PYROM (Similar to Protein psi1 acc. no. Q09912 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LRL5_PYROM)

HSP 1 Score: 61.6 bits (148), Expect = 2.090e-6
Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1 
Query: 1450 DFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMPMPLPSGKR 1689
            D    V   PHPVF+R  D  DL   V+I L EALTG+ +++ T+DG  + V  +  T PG    FPG GMP+P    KR
Sbjct:  274 DIHFVVVEKPHPVFTRVGD--DLEIRVSIPLKEALTGWEKQVTTIDGKNIKVGHSGPTSPGWSDTFPGHGMPLPKDPSKR 351
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BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Match: A0A8I0GCE1_9ACTO (J domain-containing protein n=1 Tax=Nanchangia anserum TaxID=2692125 RepID=A0A8I0GCE1_9ACTO)

HSP 1 Score: 60.8 bits (146), Expect = 2.990e-6
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 1 
Query: 1447 GDFRLTVDVLPHPVFSRGSDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFPGLGMPMPLPSGKRR 1692
            GD  LTV+V PHPV+SR  + ADL   + IS+ EA+ G + E+  LDGS   ++  + T  GM LR  G G+     SGKRR
Sbjct:  216 GDLLLTVEVAPHPVYSRSGE-ADLIADIPISIGEAVAGGSVEVPLLDGSSARIKIPAGTSSGMKLRLKGKGVRS---SGKRR 293
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1604.4164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKD7_ECTSI3.120e-9544.37Molecular chaperone, putative n=1 Tax=Ectocarpus s... [more]
A0A6H5J983_9PHAE3.900e-8741.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A834PEB8_VESPE2.990e-747.95J domain-containing protein n=10 Tax=Vespidae TaxI... [more]
A0A0C9QP73_9HYME4.450e-747.95DNAJB11 protein n=1 Tax=Fopius arisanus TaxID=6483... [more]
A0A0D1Z8H0_9PEZI4.870e-747.30J domain-containing protein n=1 Tax=Verruconis gal... [more]
A0A078ANN8_STYLE6.730e-742.86Domain containing protein n=1 Tax=Stylonychia lemn... [more]
A0A834Y5L2_9HYME1.450e-647.95J domain-containing protein n=1 Tax=Aphidius gifue... [more]
A0A182JUE2_9DIPT1.920e-649.32J domain-containing protein n=1 Tax=Anopheles chri... [more]
U4LRL5_PYROM2.090e-643.75Similar to Protein psi1 acc. no. Q09912 n=1 Tax=Py... [more]
A0A8I0GCE1_9ACTO2.990e-645.12J domain-containing protein n=1 Tax=Nanchangia ans... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1604contigL-elsbetiae_contig1604:3330..8318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score68.6
Seed ortholog evalue1.3e-08
Seed eggNOG ortholog7425.NV17844-PA
KEGG koko:K09517
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0008150,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0019827,GO:0023051,GO:0023056,GO:0030718,GO:0031594,GO:0032501,GO:0032502,GO:0036098,GO:0042592,GO:0044421,GO:0044877,GO:0045202,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050839,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060249,GO:0060250,GO:0065007,GO:0065008,GO:0090128,GO:0090129,GO:0098727,GO:2000026,GO:2001044,GO:2001046
EggNOG free text desc.DnaJ C terminal domain
EggNOG OGs38ENN@33154,3B95U@33208,3CWHF@33213,3SGME@50557,41TDF@6656,46FP3@7399,COG0484@1,KOG0713@2759
COG Functional cat.O
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Ec32 ortholog descriptionHSP40/DnaJ peptide-binding
Ec32 orthologEc-05_005820.1
Exons8
Model size1938
Cds size1938
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1604.4164.1prot_L-elsbetiae_contig1604.4164.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1604 3330..8318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815662.379433-CDS-L-elsbetiae_contig1604:3329..35151622815662.379433-CDS-L-elsbetiae_contig1604:3329..3515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 3330..3515 +
1691683022.377361-CDS-L-elsbetiae_contig1604:3329..35151691683022.377361-CDS-L-elsbetiae_contig1604:3329..3515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 3330..3515 +
1622815662.3903737-CDS-L-elsbetiae_contig1604:3834..41481622815662.3903737-CDS-L-elsbetiae_contig1604:3834..4148Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 3835..4148 +
1691683022.3940694-CDS-L-elsbetiae_contig1604:3834..41481691683022.3940694-CDS-L-elsbetiae_contig1604:3834..4148Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 3835..4148 +
1622815662.4007235-CDS-L-elsbetiae_contig1604:4419..45551622815662.4007235-CDS-L-elsbetiae_contig1604:4419..4555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 4420..4555 +
1691683022.4056623-CDS-L-elsbetiae_contig1604:4419..45551691683022.4056623-CDS-L-elsbetiae_contig1604:4419..4555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 4420..4555 +
1622815662.4151883-CDS-L-elsbetiae_contig1604:4891..55071622815662.4151883-CDS-L-elsbetiae_contig1604:4891..5507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 4892..5507 +
1691683022.420661-CDS-L-elsbetiae_contig1604:4891..55071691683022.420661-CDS-L-elsbetiae_contig1604:4891..5507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 4892..5507 +
1622815662.4255185-CDS-L-elsbetiae_contig1604:6316..66711622815662.4255185-CDS-L-elsbetiae_contig1604:6316..6671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 6317..6671 +
1691683022.4301379-CDS-L-elsbetiae_contig1604:6316..66711691683022.4301379-CDS-L-elsbetiae_contig1604:6316..6671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 6317..6671 +
1622815662.4363537-CDS-L-elsbetiae_contig1604:7334..74571622815662.4363537-CDS-L-elsbetiae_contig1604:7334..7457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 7335..7457 +
1691683022.4421744-CDS-L-elsbetiae_contig1604:7334..74571691683022.4421744-CDS-L-elsbetiae_contig1604:7334..7457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 7335..7457 +
1622815662.4465988-CDS-L-elsbetiae_contig1604:7523..76541622815662.4465988-CDS-L-elsbetiae_contig1604:7523..7654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 7524..7654 +
1691683022.4533494-CDS-L-elsbetiae_contig1604:7523..76541691683022.4533494-CDS-L-elsbetiae_contig1604:7523..7654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 7524..7654 +
1622815662.4571652-CDS-L-elsbetiae_contig1604:8241..83181622815662.4571652-CDS-L-elsbetiae_contig1604:8241..8318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 8242..8318 +
1691683022.4638755-CDS-L-elsbetiae_contig1604:8241..83181691683022.4638755-CDS-L-elsbetiae_contig1604:8241..8318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1604 8242..8318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1604.4164.1

>prot_L-elsbetiae_contig1604.4164.1 ID=prot_L-elsbetiae_contig1604.4164.1|Name=mRNA_L-elsbetiae_contig1604.4164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=646bp
AELTDEPLLESRYCPIESRFKPKEASAQHPSEKTSFRRLSMEVKNISGVA
IDVFRLNSDGQEVFKLTVHPNQASEVAACQGHLWRARASSSSGTPGRRRL
LSEVNVSSSLPLAGAAGAAGAAGAEQTENGSNDMLLWEVLACAGFQLPQS
FDASSPLGGLGHLQLMRHQVHFRPCREKAATVHPSTDIEGLVSLTLEEAF
SGKDVSVKVQQRVPCPACHGFGATSFVSCDRCSGSGKRLHDVHLTDAEDA
PTRDSCSSRYHGVGTVTVENTGVHHGGGRSSNSNSTCPHVKQNHTGTGKN
ARGGIGGLGEVACNSQNTLYNLTDGTFRKEEAVREGAKVKEDANATGLKL
IHTVDCAQCKGSGKIPAPWNNGRRGYCTRCAGARFVEAEAELVLSIPAGV
EKGHTEVYEDKGHVDLSHLIDGLQQNAAAEQAAVGGETDAKPSKARGSAP
ASSPPPPPLDSTPSASNKSFLASTARKEKIKTGDFRLTVDVLPHPVFSRG
SDGADLYTSVAISLDEALTGFTREIVTLDGSVVAVRRTSRTLPGMLLRFP
GLGMPMPLPSGKRRRSTSAEDTKTASPAAPLGAAADQGRGGEGGDAGAPG
GGSAVAFGDLVVEALVTLPTGMRDDRSRFIGNVLQASSDQAREEEE
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mRNA from alignment at L-elsbetiae_contig1604:3330..8318+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1604.4164.1 ID=mRNA_L-elsbetiae_contig1604.4164.1|Name=mRNA_L-elsbetiae_contig1604.4164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4989bp|location=Sequence derived from alignment at L-elsbetiae_contig1604:3330..8318+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGAACTGACGGACGAACCCCTACTCGAAAGCCGGTACTGTCCAATCGA
AAGCCGGTTCAAGCCTAAAGAAGCCTCCGCACAACACCCCAGCGAGAAAA
CTTCCTTCAGGCGACTATCGATGGAAGTGAAAAACATCTCTGGTGTGGCC
ATCGACGTGTTCAGGCTGAATTCTGACGGTCAGGAGGTGGGAAGGTCTGC
AGTGCTACTCGTTCTTGCTAGCCTCGAATGTGTGTGCTATCACTTTTCTG
CCTTCCTGCAGCACCCAAACGTAGAAAGCGTATTTTCGACATTTCCCCCA
AGGTAAGTTATTGCGCCTCACATGTTGTTTGTATTGTACGTAATATTTGT
AGTCTATTTAGGAATGTTCAGGTGAAAAAATGGACAGTCGCTGGTACGAG
AGAATAGGAATGGTGACTGCTGTTCGTGGGCAGGACCACCCCTCCCTCTC
ATTCGGCATCCTCATTATCGTCGCAACCGTTGACGTATGTACCATGATAC
TGCAGGTGTTCAAGCTAACTGTCCATCCAAACCAGGCTAGTGAGGTTGCT
GCCTGTCAAGGGCATCTCTGGCGTGCCCGCGCTTCGTCTTCTTCTGGTAC
TCCTGGTCGGCGAAGGTTGTTGTCTGAGGTCAATGTTTCATCTTCCCTTC
CATTAGCTGGTGCTGCTGGTGCTGCAGGTGCTGCTGGTGCTGAGCAAACG
GAGAATGGATCCAATGATATGCTTCTGTGGGAGGTGCTGGCTTGCGCTGG
GTTTCAACTTCCACAATCGTTTGACGCATCTTCTCCCCTCGGCGGCCTTG
GACATTTGCAGCTGATGAGGTAACCCCTCCGCAACGAAGCCTGAGGGATG
AACTCTACTCCTAGCCTGTTGGATATCTCGTCGTGAGAGGCAGAACAGAA
GGAAGCTGAGATCAATTTAGTCAAATTTTTAGCTTGCATAGCAGCAGAAA
CATAGATAGCCAGAGCGAGATTCAACCAAGCCTCCGCTCAGCGTTTCGAA
GCTTGGCGTGACTTACTGTTCGACCCGGCATTTTGATTTGACTGAGGATG
GCGGTCATCCATTCGTCTACTTCGAACCCCACTGTCTGAGACATCAAGTT
CATTTTCGGCCTTGCAGGGAAAAAGCCGCAACTGTACACCCAAGCACAGA
CATCGAAGGCTTGGTGTCCCTCACTCTGGAAGAGGCGTTCAGCGGTAAAG
ATGTCTCCGTTAAAGTGCAACAGCGGGTGAGAACAGCGCCCGAAAGCGAG
GTGCATGGCTTTTCAGATCCACAGGTGTAAGCATCGCACACACCTGATAC
ACTTCCGGCTGGGGTGTGTGGAAAAAACACTGAATAATTATTCTTGTGGA
ATGGCGCGTTGTACCGATGCGCCTCTGTGGGCGGGGTGGGTGGTTGAAAC
GTGCACTGACGGTACTTTTGGATACTGCAAAGTTGTGTGAATTGATACGG
GGTACTCAAAATGAACACGAGCTCGCCTACGATTCCGTTTGGTGCTCTCC
TGCCCTAATATCCCCAACCACCCCCGACACCGCATGACGGGGAAACACAC
ACTACTGTGTAGGTTCCCTGCCCCGCGTGCCACGGCTTCGGGGCAACCTC
TTTCGTCTCTTGCGACCGCTGCAGTGGATCGGGCAAACGTCTCCACGACG
TTCATCTTACAGATGCTGAAGACGCCCCGACCAGGGACTCGTGCAGTTCT
CGTTACCACGGCGTGGGTACCGTGACAGTGGAGAATACCGGTGTGCACCA
CGGGGGCGGTAGAAGCAGCAACAGCAACAGCACGTGCCCACACGTAAAAC
AAAATCATACAGGCACTGGAAAGAACGCAAGGGGTGGCATTGGCGGCCTG
GGCGAGGTCGCCTGCAACAGCCAGAATACGCTATATAACCTCACTGATGG
AACCTTCCGGAAGGAAGAAGCCGTCCGAGAGGGTGCCAAGGTCAAGGAAG
ACGCCAACGCCACGGGGCTGAAACTGATACACACCGTCGACTGCGCCCAG
TGCAAGGGCTCCGGCAAGATTCCAGCTCCGTGGAACAATGGAAGGCGAGG
GTACTGTACACGGTGCGCGGGTGCCAGGTTTGTGGAGGCAGAGGCCGAGC
TTGTTCTTTCGATTCCAGCCGGAGTGGAAAAGGGCCACACCGAAGTTTAT
GAAGACAAGGGGCATGTCGATCTTTCCCGTGAGAAACATATCCCTCGGGC
CCAGAGCACAGGTTTCCTTCCTGCTTCGGACTTATCGCGCGGACGCAGGG
GTGTTAAACGTGTGGGTACGGCTGGCGTTCTTTCTATCGGGCTCTATGTG
GGAAGAGTCTATTCTAGTTCCAAACTTACCGGTCAAGGTTCTGTTTGCGT
AGACTCTTTTCAACACTGAGTCGCATTTCCTGTTTTATGAGGGGTCAGGA
GTATAGACATATACGAGTTCTATCTACGCATGCAGGGTAGTAGGGGTCGT
GAACCAGACTGGGCGAGATGCACTTTATTTGTTTCCTCCCATTATTGGCA
CATTTGTCGTCTGCCCCACTGGCCTCCACACTCCACTGTTCGTTAGATGG
ACTTATCCACTAGACCACTCAGTCAAGCGCGCTTGATTGAGTGGTCTAGT
GGATAAGTCCATCTAACGAACATCCACTACGACTAGCTAGACGACCCGAC
CGGGGTCACACAGGAGCACTATCTGTGCGGGGACCCTCAAGTCCACACGG
TAAACGAGTGCTTGCCTGACCGGCGTCCAGCGAGTTGAGAATAGGTGAAA
CACGTTGCTCACGAACATCTGTTACAAGATTCACGATTCGATCCTCTATC
GCGTCTGCCGTAGGTCTCAGCCAGCTTTTCATGCGTCTCTCCCCCAGATA
CGCCAGGTTTTTGATTCGCGTGAAAACCTTGCGGCAAGTTTTTTTATTCA
AACTACTGTGTGCGTCTTGTACCGGGTTAACTCTCACGGAATGCGCACCC
GTTCTTCGTCTGCATTCCTTCCACCCCATCGACACAGACCTCATAGATGG
GCTGCAACAGAATGCAGCAGCTGAGCAAGCTGCCGTAGGCGGTGAAACCG
ACGCAAAGCCCAGCAAAGCCCGCGGGTCGGCCCCGGCTTCCTCTCCCCCA
CCCCCGCCCCTTGACTCTACCCCCTCAGCCTCAAACAAATCATTTCTCGC
CTCGACGGCGAGAAAAGAGAAAATCAAGACAGGCGATTTCCGCCTCACGG
TCGATGTGTTGCCGCATCCGGTGTTTTCGCGGGGAAGTGATGGGGCTGAT
CTATACACCTCGGTCGCGATAAGTCTCGACGAGGCGCTGACGGGGTTCAC
GCGTGAAATCGTCACGCTGGATGGGTCAGTGGTGGCGGTCAGGTAAAGCG
ATCTAAAAAACAGTTTTCCTGTGGTTGTGCGTGGACTCTGCCGCTGCGTT
TAGTGGTGTCGGTGGTGCTGTCTTGGGACTTTCCCACCCGTCATCTGCTT
CGCCGAAGCATAAGCGGTTTCGCGTGGTGGTCCACTGGTCTTCCCTGAAA
CTGTCGGAGTCTGACGCTGTGCGTGGTCATTTTCTTCCCCTGGCCTTTTT
TTACCACCACTGCTTCTCCTTGCCGCCGCAGGAAACATGACTTGTGTCGT
TTGGCTGCGATACCTCTTTTCGCTTGCCCAAATACGCGTTTCGCCGCTCG
CGTGGCGGGTTGCTTGCTCTTCGCCGCCTGTTAGGCGTCGCTCTCGCGGT
GACGAGAGAGCACCTTTTTCTGTTTCTTAGGGATACCCACACGTTTACCA
GCGCTCGGGCGAGGGTACGATCAAATTTAGAAGCAGTGCGCCATTCTTGG
TCGCTGCGTAGTAACCGCAGTGTTATGTCTTTTCGTTCTGCCAGTGTGCT
GTGTCTACCCTGGGGACAGGTACAGTGATAGCTCCCCTGCTAAGTGTTTT
TTAGAACCACCCATTCCAATCTAATTTACTCCCCCACTTCTGGCCACTAT
CTACCCCCCGCCTTGTGCCCCTCGGCCCGGGGAATGCTCTTTTGTTCTGC
CTCAGGCGCACAAGTCGCACTCTTCCGGGAATGCTGCTACGCTTCCCTGG
GCTCGGGATGCCCATGCCGTTGCCCTCCGGCAAGAGGCGCCGATCCACCA
GCGCCGAGGATACTAAGACAGCGTCGCCGTCGCCGAAAGACAGGGCGGCT
AGTGCACCTGAAGCGACCGTCGTTGTCGGAGCGGCTTTTTCGAGGGCGGC
CCCGTTGGGTGCGGCCGCCGATCAAGGTCGGGGGGGGGAGGGGGGCGACG
CCGGTGCTCCTGGGGGGGGTTCCGCGGTGGCCTTTGGCGACCTGGTCGTC
GAGGCTTTGGTTACGCTGCCGACGGGTGAGAGGGTGTACCTCCCCGGGAG
AGTTAAACGAGGGGGGGGGGGGGGGTGTTGCCCTGCGGACGCTAGGGTGC
TCGTTTGAAAGTTGCGTGTTGCAAGCAGGGGTAAAAAAGGGATCTATGCC
CCACGTGGTGTCTCATCGGAGCAAAAACGAAAAAGACCACAGGTTAGCTT
TGGGGGGGGACCATGTAGCCTTCACCCACCTCCACGGCTCGGTACATACG
TACCTCCTGAATCTTCTGCGCGGACACAATACCTCGACCCTCTCCGAATG
CTTCCAAACCCACTACCGTAGGTGACATAAGATAAGACACCCCCTGCACC
GATATTGAAAGCTTGGTTACTCCGCAACGAATACGATTCTAACCACAAAC
GCCACATTATCGGAAAGCTCTCGACGTAATCTTTCCAACGCCGCCCTTTT
CTAGACTGACGCTCTGCTTGCTGTGGAGTACTTGAGCTTTGAAAATCGGT
CCAGGGGGTGTCTTATCTTATGTCACCTACGGTACTGCGCCCCCTCTTGC
CCGGTTCGCGTCACCCCCTGATGCGTCCATGCTATTGGCGGTTGACTCTT
TACCGCGGTTAGGTATGAGAGATGACCGGTCCAGGTTTATCGGGAATGTC
TTACAGGCCAGTTCAGATCAAGCCAGAGAAGAAGAAGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1604:3330..8318+

>mRNA_L-elsbetiae_contig1604.4164.1 ID=mRNA_L-elsbetiae_contig1604.4164.1|Name=mRNA_L-elsbetiae_contig1604.4164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3876bp|location=Sequence derived from alignment at L-elsbetiae_contig1604:3330..8318+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGAACTGACGGACGAACCCCTACTCGAAAGCCGGTACTGTCCAATCGA
AAGCCGGTTCAAGCCTAAAGAAGCCTCCGCACAACACCCCAGCGAGAAAA
CTTCCTTCAGGCGACTATCGATGGAAGTGAAAAACATCTCTGGTGTGGCC
ATCGACGTGTTCAGGCTGAATTCTGACGGTCAGGAGGCAGAACTGACGGA
CGAACCCCTACTCGAAAGCCGGTACTGTCCAATCGAAAGCCGGTTCAAGC
CTAAAGAAGCCTCCGCACAACACCCCAGCGAGAAAACTTCCTTCAGGCGA
CTATCGATGGAAGTGAAAAACATCTCTGGTGTGGCCATCGACGTGTTCAG
GCTGAATTCTGACGGTCAGGAGGTGTTCAAGCTAACTGTCCATCCAAACC
AGGCTAGTGAGGTTGCTGCCTGTCAAGGGCATCTCTGGCGTGCCCGCGCT
TCGTCTTCTTCTGGTACTCCTGGTCGGCGAAGGTTGTTGTCTGAGGTCAA
TGTTTCATCTTCCCTTCCATTAGCTGGTGCTGCTGGTGCTGCAGGTGCTG
CTGGTGCTGAGCAAACGGAGAATGGATCCAATGATATGCTTCTGTGGGAG
GTGCTGGCTTGCGCTGGGTTTCAACTTCCACAATCGTTTGACGCATCTTC
TCCCCTCGGCGGCCTTGGACATTTGCAGCTGATGAGGTGTTCAAGCTAAC
TGTCCATCCAAACCAGGCTAGTGAGGTTGCTGCCTGTCAAGGGCATCTCT
GGCGTGCCCGCGCTTCGTCTTCTTCTGGTACTCCTGGTCGGCGAAGGTTG
TTGTCTGAGGTCAATGTTTCATCTTCCCTTCCATTAGCTGGTGCTGCTGG
TGCTGCAGGTGCTGCTGGTGCTGAGCAAACGGAGAATGGATCCAATGATA
TGCTTCTGTGGGAGGTGCTGGCTTGCGCTGGGTTTCAACTTCCACAATCG
TTTGACGCATCTTCTCCCCTCGGCGGCCTTGGACATTTGCAGCTGATGAG
ACATCAAGTTCATTTTCGGCCTTGCAGGGAAAAAGCCGCAACTGTACACC
CAAGCACAGACATCGAAGGCTTGGTGTCCCTCACTCTGGAAGAGGCGTTC
AGCGGTAAAGATGTCTCCGTTAAAGTGCAACAGCGGACATCAAGTTCATT
TTCGGCCTTGCAGGGAAAAAGCCGCAACTGTACACCCAAGCACAGACATC
GAAGGCTTGGTGTCCCTCACTCTGGAAGAGGCGTTCAGCGGTAAAGATGT
CTCCGTTAAAGTGCAACAGCGGGTTCCCTGCCCCGCGTGCCACGGCTTCG
GGGCAACCTCTTTCGTCTCTTGCGACCGCTGCAGTGGATCGGGCAAACGT
CTCCACGACGTTCATCTTACAGATGCTGAAGACGCCCCGACCAGGGACTC
GTGCAGTTCTCGTTACCACGGCGTGGGTACCGTGACAGTGGAGAATACCG
GTGTGCACCACGGGGGCGGTAGAAGCAGCAACAGCAACAGCACGTGCCCA
CACGTAAAACAAAATCATACAGGCACTGGAAAGAACGCAAGGGGTGGCAT
TGGCGGCCTGGGCGAGGTCGCCTGCAACAGCCAGAATACGCTATATAACC
TCACTGATGGAACCTTCCGGAAGGAAGAAGCCGTCCGAGAGGGTGCCAAG
GTCAAGGAAGACGCCAACGCCACGGGGCTGAAACTGATACACACCGTCGA
CTGCGCCCAGTGCAAGGGCTCCGGCAAGATTCCAGCTCCGTGGAACAATG
GAAGGCGAGGGTACTGTACACGGTGCGCGGGTGCCAGGTTTGTGGAGGCA
GAGGCCGAGCTTGTTCTTTCGATTCCAGCCGGAGTGGAAAAGGGCCACAC
CGAAGTTTATGAAGACAAGGGGCATGTCGATCTTTCCCGTTCCCTGCCCC
GCGTGCCACGGCTTCGGGGCAACCTCTTTCGTCTCTTGCGACCGCTGCAG
TGGATCGGGCAAACGTCTCCACGACGTTCATCTTACAGATGCTGAAGACG
CCCCGACCAGGGACTCGTGCAGTTCTCGTTACCACGGCGTGGGTACCGTG
ACAGTGGAGAATACCGGTGTGCACCACGGGGGCGGTAGAAGCAGCAACAG
CAACAGCACGTGCCCACACGTAAAACAAAATCATACAGGCACTGGAAAGA
ACGCAAGGGGTGGCATTGGCGGCCTGGGCGAGGTCGCCTGCAACAGCCAG
AATACGCTATATAACCTCACTGATGGAACCTTCCGGAAGGAAGAAGCCGT
CCGAGAGGGTGCCAAGGTCAAGGAAGACGCCAACGCCACGGGGCTGAAAC
TGATACACACCGTCGACTGCGCCCAGTGCAAGGGCTCCGGCAAGATTCCA
GCTCCGTGGAACAATGGAAGGCGAGGGTACTGTACACGGTGCGCGGGTGC
CAGGTTTGTGGAGGCAGAGGCCGAGCTTGTTCTTTCGATTCCAGCCGGAG
TGGAAAAGGGCCACACCGAAGTTTATGAAGACAAGGGGCATGTCGATCTT
TCCCACCTCATAGATGGGCTGCAACAGAATGCAGCAGCTGAGCAAGCTGC
CGTAGGCGGTGAAACCGACGCAAAGCCCAGCAAAGCCCGCGGGTCGGCCC
CGGCTTCCTCTCCCCCACCCCCGCCCCTTGACTCTACCCCCTCAGCCTCA
AACAAATCATTTCTCGCCTCGACGGCGAGAAAAGAGAAAATCAAGACAGG
CGATTTCCGCCTCACGGTCGATGTGTTGCCGCATCCGGTGTTTTCGCGGG
GAAGTGATGGGGCTGATCTATACACCTCGGTCGCGATAAGTCTCGACGAG
GCGCTGACGGGGTTCACGCGTGAAATCGTCACGCTGGATGGGTCAGTGGT
GGCGGTCAGACCTCATAGATGGGCTGCAACAGAATGCAGCAGCTGAGCAA
GCTGCCGTAGGCGGTGAAACCGACGCAAAGCCCAGCAAAGCCCGCGGGTC
GGCCCCGGCTTCCTCTCCCCCACCCCCGCCCCTTGACTCTACCCCCTCAG
CCTCAAACAAATCATTTCTCGCCTCGACGGCGAGAAAAGAGAAAATCAAG
ACAGGCGATTTCCGCCTCACGGTCGATGTGTTGCCGCATCCGGTGTTTTC
GCGGGGAAGTGATGGGGCTGATCTATACACCTCGGTCGCGATAAGTCTCG
ACGAGGCGCTGACGGGGTTCACGCGTGAAATCGTCACGCTGGATGGGTCA
GTGGTGGCGGTCAGGCGCACAAGTCGCACTCTTCCGGGAATGCTGCTACG
CTTCCCTGGGCTCGGGATGCCCATGCCGTTGCCCTCCGGCAAGAGGCGCC
GATCCACCAGCGCCGAGGATACTAAGACAGCGTCGCCGCGCACAAGTCGC
ACTCTTCCGGGAATGCTGCTACGCTTCCCTGGGCTCGGGATGCCCATGCC
GTTGCCCTCCGGCAAGAGGCGCCGATCCACCAGCGCCGAGGATACTAAGA
CAGCGTCGCCGGCGGCCCCGTTGGGTGCGGCCGCCGATCAAGGTCGGGGG
GGGGAGGGGGGCGACGCCGGTGCTCCTGGGGGGGGTTCCGCGGTGGCCTT
TGGCGACCTGGTCGTCGAGGCTTTGGTTACGCTGCCGACGGGGCGGCCCC
GTTGGGTGCGGCCGCCGATCAAGGTCGGGGGGGGGAGGGGGGCGACGCCG
GTGCTCCTGGGGGGGGTTCCGCGGTGGCCTTTGGCGACCTGGTCGTCGAG
GCTTTGGTTACGCTGCCGACGGGTATGAGAGATGACCGGTCCAGGTTTAT
CGGGAATGTCTTACAGGCCAGTTCAGATCAAGCCAGAGAAGAAGAAGAGG
TATGAGAGATGACCGGTCCAGGTTTATCGGGAATGTCTTACAGGCCAGTT
CAGATCAAGCCAGAGAAGAAGAAGAG
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