mRNA_L-elsbetiae_contig1600.4148.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI) HSP 1 Score: 194 bits (492), Expect = 7.870e-53 Identity = 126/281 (44.84%), Postives = 139/281 (49.47%), Query Frame = 1 Query: 73 QVLEAVGPVNETVDRCFTDTTSRLRGTDFPSLYMDVCRLYQ--------------------------TRLNNLDSSILPYFQA---------------------------------------------------------------------------NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 QV EAVG +E VDRCFT TTSRLRGTDF SLYMD+CRL+Q LNN ++ + A N+IGGRSNTGEGGEDAERFTDNR S IKQVAS RFGVTS YLANS QIQIKMAQG+KPGEGG LP KV IAQNR+T PG G+ SP PHH I +EDLA +H +NAN EV VKLVSE Sbjct: 509 QVFEAVGLADEIVDRCFTGTTSRLRGTDFSSLYMDICRLHQKAYPPNTQNLPLLDNLGQFHYRDGGEAHLNNPETMVYLQMAARNNSREAYKSYSDAVTSATERVALRGLLRFKDEPSLSIPLEEVEPVGEIMKRFNTGAMSLGSISRETHETLAQAVNEIGGRSNTGEGGEDAERFTDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGSKVTKYIAQNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPKGEVSVKLVSE 789
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A6H5KZS8_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 2.000e-50 Identity = 126/288 (43.75%), Postives = 139/288 (48.26%), Query Frame = 1 Query: 73 QVLEAVGPVNETVDRCFTDTTSRLRGTDFPSLYMDVCRLYQ--------------------------TRLNNLDSSILPYFQA---------------------------------------------------------------------------NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFK-------VNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 QV EAVG +E VDRCFT TTSRLRGTDF SLYMD+CRL+Q LNN ++ + A N+IGGRSNTGEGGEDAERFTDNR S IKQVAS RFGVTS YLANS QIQIKMAQG+KPGEGG LP K V IAQNR+T PG G+ SP PHH I +EDLA +H +NAN EV VKLVSE Sbjct: 833 QVFEAVGLADEIVDRCFTGTTSRLRGTDFSSLYMDICRLHQKAYPPNTSNLPLLDNLGQFHYRDGGEAHLNNPETMVYLQMAARNNSREAYKSYSDAVTSATERVALRGLLRFKDEPSLSIPLEEVEPVGEIMKRFNTGAMSLGSISRETHETLAQAVNEIGGRSNTGEGGEDAERFTDNRRSAIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGSKASVCRQEVTKYIAQNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPKGEVSVKLVSE 1120
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: K0TIB2_THAOC (Glu_synthase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIB2_THAOC) HSP 1 Score: 166 bits (419), Expect = 3.270e-46 Identity = 86/123 (69.92%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N +GGRSNTGEGGED ERF DNR S+IKQVAS RFGVTS+YLANS QIQIKMAQG+KPGEGG LP FKV+ IA+NR+T PG G+ SP PHH I +EDLA +H +NA EV VKLVSE Sbjct: 57 NALGGRSNTGEGGEDPERFLDNRRSSIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAENRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPTGEVSVKLVSE 179
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A7S2YAK0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAK0_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.090e-45 Identity = 115/282 (40.78%), Postives = 136/282 (48.23%), Query Frame = 1 Query: 73 QVLEAVGPVNETVDRCFTDTTSRLRGTDFPSLYMDVCRLYQT------------------------------------------------------RLNNLD----------------------------SSILPYFQA--------------------NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 QV EAVG +E VDRCFT+TT+R++GTDF +LY D+ R +++ RL N S I+ F N +GGRSNTGEGGED RF DNR S+IKQVAS RFGVTS+YLANS QIQIKMAQG+KPGEGG LP FKV+ IA NR+T PG G+ SP PHH I +EDLA +H +NA EV VKLVSE Sbjct: 81 QVFEAVGLADEVVDRCFTNTTTRIQGTDFEALYRDLERFHESAYPTGTTEFDGLVRSDGQFHYRDGGEAHLNTPGNMVNLQIAARTNSREAYKEFARLTNEQNQKVTLRGQLKFKFDPSKSIPLEEVEPVSDIVKRFATGAMSLGSISREAHETLAVAMNALGGRSNTGEGGEDPARFLDNRRSSIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIASNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPTGEVSVKLVSE 362
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A7S0CFF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFF7_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.470e-44 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N IGGRSNTGEGGED +RF DNR S+IKQVAS RFGVTS YLANS QIQIKMAQG+KPGEGG LP FKV+ IAQNR+T PG G+ SP PHH I +EDLA +H +NAN + V KLVSE Sbjct: 175 NSIGGRSNTGEGGEDPKRFLDNRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAQNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPHGMVSTKLVSE 297
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A7S1ZND1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZND1_TRICV) HSP 1 Score: 165 bits (418), Expect = 1.700e-43 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N +GGRSNTGEGGED +RFTDNR S IKQVAS RFGVTS+YLANS QIQIKMAQG+KPGEGG LP FKV+ IA NR+T PG G+ SP PHH I +EDLA +H +NA EV VKLVSE Sbjct: 279 NSLGGRSNTGEGGEDPKRFTDNRRSAIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAANRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPTGEVSVKLVSE 401
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: B7GAZ5_PHATC (Ferredoxin-dependent glutamate synthase, fusion of large and small subunits n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAZ5_PHATC) HSP 1 Score: 165 bits (418), Expect = 6.610e-43 Identity = 86/123 (69.92%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N IGGRSNTGEGGED +RF DNR S+IKQVAS RFGVTS+YLANS QIQIKMAQG+KPGEGG LP FKV+ IA+NR+T PG G+ SP PHH I +EDLA +H +NA EV VKLVSE Sbjct: 989 NSIGGRSNTGEGGEDPKRFLDNRRSSIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAENRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPKGEVSVKLVSE 1111
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A7S2PI44_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PI44_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.160e-42 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N IGGRSNTGEGGED +RF DNR S IKQVAS RFGVTS+YLANS QIQIKMAQG+KPGEGG LP FKV+ IA+NR+T PG G+ SP PHH I +EDLA +H +NA EV VKLVSE Sbjct: 524 NAIGGRSNTGEGGEDPKRFLDNRRSAIKQVASGRFGVTSHYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAENRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPTGEVSVKLVSE 646
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A835YLR4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR4_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.260e-42 Identity = 87/123 (70.73%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N IGGRSNTGEGGED ERF D+R S+IKQVAS RFGVTS YLANS QIQIKMAQG+KPGEGG LP KV IA+NR+T PG G+ SP PHH I +EDLA +H +NAN N EV VKLVSE Sbjct: 954 NTIGGRSNTGEGGEDPERFADSRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGNKVTRYIAKNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPNGEVSVKLVSE 1076
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Match: A0A7S3VBN2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBN2_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.270e-42 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 244 NKIGGRSNTGEGGEDAERFTDNRWSTIKQVASNRFGVTSYYLANSGQIQIKMAQGSKPGEGGLLPDFKVNASIAQNRYTIPGAGISSPLPHHSICFVEDLA--MHPSENANLNAEVPVKLVSE 606 N +G RSNTGEGGED ERF DNR S+IKQVAS RFGVTS YLANS QIQIKMAQG+KPGEGG LP FKV+ IA+NR+T PG G+ SP PHH I +EDLA +H +NA N EV VKLVSE Sbjct: 1008 NALGARSNTGEGGEDPERFEDNRRSSIKQVASGRFGVTSNYLANSDQIQIKMAQGAKPGEGGELPGFKVSEYIAKNRHTTPGVGLISPPPHHDIYSIEDLAQLIHDLKNAQPNGEVSVKLVSE 1130 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1600.4148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1600.4148.1 >prot_L-elsbetiae_contig1600.4148.1 ID=prot_L-elsbetiae_contig1600.4148.1|Name=mRNA_L-elsbetiae_contig1600.4148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp MYIYCSEHCSRLVIEEPTLTLEELQVLEAVGPVNETVDRCFTDTTSRLRGback to top mRNA from alignment at L-elsbetiae_contig1600:2522..4538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1600.4148.1 ID=mRNA_L-elsbetiae_contig1600.4148.1|Name=mRNA_L-elsbetiae_contig1600.4148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2017bp|location=Sequence derived from alignment at L-elsbetiae_contig1600:2522..4538- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1600:2522..4538- >mRNA_L-elsbetiae_contig1600.4148.1 ID=mRNA_L-elsbetiae_contig1600.4148.1|Name=mRNA_L-elsbetiae_contig1600.4148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1506bp|location=Sequence derived from alignment at L-elsbetiae_contig1600:2522..4538- (Laminarionema elsbetiae ELsaHSoW15)back to top |