mRNA_L-elsbetiae_contig15994.4130.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 358 bits (920), Expect = 1.100e-114 Identity = 180/279 (64.52%), Postives = 216/279 (77.42%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEVGGGSEGPFKRARTHTGRPARKQAEEDPFAVFGRTDVVDDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGV 839 RVWD+ T DP FFC AA LLTPPFSEG H+AAMKL A + YLP+ + ATAPT+DEEV KLDE W EIK+RAV+AVK +Q G G+ G FKRART R+ + D FA FGR+ ++ + D VEQE+ +EIMRYKGVF+ DL P+EVL YW T G+ +F +LK+VAQQTFG+Q SAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFL AN++FIP+Y +IP+IDS+D+RKCLPAKF GT+EDLL AEMALDPL N+TPP + D G+ Sbjct: 574 RVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGRSVGGVEESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPPGEDDTGL 852
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 306 bits (785), Expect = 2.650e-98 Identity = 169/282 (59.93%), Postives = 198/282 (70.21%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRP---EVGGGSEGPFKRARTHTGRPARKQAEEDPFAVFGRTDVVDDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGV 839 RVW++ +P+PSFFCDAA LLTPPFSEGRH++AM+LTAE+A YLP ++ APT D EV KLD AW EI+KRAV++VKT+QDR + GGG GPFKRA T GR AR + D F GRT V+ E + R SEVL YWG GK AF SLK+VAQQTFGNQASAAPVERDFSGCGLF+VPNRSRV+EYWVEMVMFLKAN+ +IP ID +D+RKCLPAKF GT+ED L AEMAL PLSND PP +A +G+ Sbjct: 252 RVWNEQSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGGG-GPFKRAHTSGGRSARNPTDPDEFTDSGRTAAVE---------EARRMTSCSR-------------SEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDAPPAEAGLGL 509
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 300 bits (767), Expect = 2.050e-94 Identity = 158/254 (62.20%), Postives = 189/254 (74.41%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEVGGGSEG--PFKRARTHTGRPARKQAEEDPFAVFGRTDVV--DDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFN 752 VWDD+ DPS FCDAA LLTPPFSEG +L+AMKLTAEE L A + APT DE+V EKL+ WAEIKKRAV AVKT+Q+R GG +G PFKRART P+R++ ED F++FG +V D + D VE+E+ EI+RYKGVF+ P DLPPS+VL YW GK F SLKYVAQQTFG+QASAA +ERDFS CGLF NRSR EEYW+EMVM LK NY+ IP+Y DIP+IDS+D+RKCLPAK++ Sbjct: 330 HVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYS 583
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 7.840e-83 Identity = 151/284 (53.17%), Postives = 183/284 (64.44%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEV---GGGSEGPFKRARTHTGRPARKQAEEDPFAVFGRTDVVDDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGVDG 845 R W DPSF D++ LLTPP+S G H++AMKLT EE YLP PT DE+V +K EAW IKKRA+QAVK Q + GGG GPFKRART AR A ED FAV V+ + D + + EI R + + + DL P +VL YW G+ AF +L YVAQQ FG+QA AA +ERDFS GL NR+R++EYWVEMV+FLKAN+Q IP Y DIPN+DS+ +R+CLPAKF GTNE LL AEMALDPL N TPPN + IG +G Sbjct: 229 RYWAGCV-DPSFV-DSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSG-DDGDLSVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLENKTPPNTSAIGDNG 509
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 223 bits (567), Expect = 5.370e-68 Identity = 128/288 (44.44%), Postives = 176/288 (61.11%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPE-VGGGSEGPFKRAR--THTGRPARKQAEEDPFAVFGR------TDVVDDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGV 839 RVWDD + DPS F DAA LLTPPF+ G++L A++L+A +A YL APT+D EV KLD WA+IK+RA +A + + R E + G + KR R + T RK F++FGR TD + D+++E + + + E+ YK +FI +L EVL +W GK F L VAQQ FGNQA+ + VERDFSG G+ L PNRSR++ YWVE+VMFL AN+ IP IP + ++++R CLPA+F+G + DL+ AE D L N PP+ DI + Sbjct: 29 RVWDDDSADPSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGVQPLHKRFRGESSTSSATRKSR----FSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTAPPSVNDIDL 312
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5JWR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR2_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.430e-64 Identity = 130/249 (52.21%), Postives = 151/249 (60.64%), Query Frame = 3 Query: 105 LTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRP--EVGGGSEGPFKRARTHTGRPARKQAEEDPFAVFGRTDVV--DDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGV 839 LTAEE YLPA + PT DE+V EKLDE WAEIKKRAV AVK Q R + G G GPFKRART P+R++ +D FAVFGR +V +E + D+VE+ + SEIMRYKGVF+ DLPPS+VL YW T GK +F SLKYVAQQT G+QASA VER FS CGLF V NR KF+G N+DLLKAEMALDPLSN TPP + D+GV Sbjct: 295 LTAEEGEYLPAGSDVIVPTSDEDVQEKLDETWAEIKKRAVTAVKKAQSRAVGDGGNGEAGPFKRARTSGAGPSRRKNHDDAFAVFGRNEVAPQSSNEEDLDLVEKGVSSEIMRYKGVFMRSTDLPPSKVLHYWKTVGKHSFPSLKYVAQQTLGSQASAPQVERGFSHCGLFCVGNR-----------------------------------------KFSGKNDDLLKAEMALDPLSNTTPPQEDDVGV 502
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 216 bits (549), Expect = 7.830e-62 Identity = 122/218 (55.96%), Postives = 146/218 (66.97%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEVGGGSEG--PFKRARTHTGRPARKQAEEDPFAVFGRTDVV--DDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWV 644 RVWDD+ DPS FCDAA LLTPPFSEG + +AMKLTAEE YL A + APT DE+V EKL+ WAEIKKRA+ AVKT Q+R GG +G PFKRART P+R++ E+ F++FGR +V DE + D VE+E+ EIMR +VL YW G+ SLKYVAQQTFG+QASAA +ERDFS CGLF NRSR EEYW+ Sbjct: 450 RVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGAAPSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR--------------DVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWL 653
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 206 bits (523), Expect = 2.680e-58 Identity = 115/279 (41.22%), Postives = 163/279 (58.42%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEVGGGSEGPFKRARTHTGRPARKQAEEDPFAVFGRTDVVDDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLKANYQFIPEYGDIPNIDSRDMRKCLPAKFNGTNEDLLKAEMALDPLSNDTPPNKADIGV 839 RVWD + DPS F +A+ LLTP + + L A LTA ++ +L APT+D EV++KL++ WA+IK RA +A + + G + P KR T + + A V G T+ V + ++E V+ Q++ E+ R++ +++ ++L EVL +W G+ F L VAQQ GNQA AA VERDFS C L NRSR++ YWVEMVMFL NY+ IP + DIP I ++D+R CLP +FNG + DL AE D + N N +DIGV Sbjct: 345 RVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATAEGGQPPLKRLSTPATKARPRFASLARNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIEN---TNNSDIGV 620
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.950e-50 Identity = 102/168 (60.71%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRPEVGGGSEG--PFKRARTHTGRPARKQAEEDPFAVFGRTDVV-DDDETE*DVVEQEIGSEIMRYKGVFIAPKDLPPSEVLMYWGT 497 RVWD +T DPS CDA LLTPPFSEG +++AMKLTAEE YLPA + TAPTLDEEV EKLD AW EIKKRAV AVKT Q R P KRART P R++ ED FAVFGR +V E D+VE+E+ SEIMRYKGVFI DL PSE L YW T Sbjct: 200 RVWDTSTLDPSVLCDAPCLLTPPFSEGNYVSAMKLTAEECEYLPAGSCVTAPTLDEEVKEKLDGAWTEIKKRAVAAVKTAQSRAAXXXXXXXXXPLKRARTSAAGPTRRKNREDAFAVFGRKEVAPQSSEGNLDLVEEEVSSEIMRYKGVFIESTDLSPSEALNYWKT 367
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Match: A0A6H5KBZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ2_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.980e-47 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 3 RVWDDTTPDPSFFCDAARLLTPPFSEGRHLAAMKLTAEEAAYLPANTGATAPTLDEEVNEKLDEAWAEIKKRAVQAVKTQQDRP--EVGGGSEGPFKRARTHTGRPARKQAE--EDPFAVFGRTDVV---DDDETE*DVVEQEIGSEIMRYKGVFIAPKDL 464 RVWD++T DPS F D A LLTPPFSEG +L+AMKLT EE YLPA + APT DE+V EKLD AWAEI+KRAV AVK Q + + GG GPFKRART+ P+R++ E +D FA FGR +V ++++ + D+VE+E+ SEIMRYKGVF+ PKD+ Sbjct: 29 RVWDESTLDPSIFADVACLLTPPFSEGNYLSAMKLTVEEGDYLPAGSSVIAPTSDEDVREKLDGAWAEIQKRAVTAVKKAQRQAAGDSDGGGAGPFKRARTNGAGPSRRKNENQDDTFAAFGRNEVAPQTNEEDADVDLVEEEVVSEIMRYKGVFMRPKDV 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15994.4130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15994.4130.1 >prot_L-elsbetiae_contig15994.4130.1 ID=prot_L-elsbetiae_contig15994.4130.1|Name=mRNA_L-elsbetiae_contig15994.4130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp MRYKGVFIAPKDLPPSEVLMYWGTKGKFAFASLKYVAQQTFGNQASAAPVback to top mRNA from alignment at L-elsbetiae_contig15994:2877..3949+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15994.4130.1 ID=mRNA_L-elsbetiae_contig15994.4130.1|Name=mRNA_L-elsbetiae_contig15994.4130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1073bp|location=Sequence derived from alignment at L-elsbetiae_contig15994:2877..3949+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15994:2877..3949+ >mRNA_L-elsbetiae_contig15994.4130.1 ID=mRNA_L-elsbetiae_contig15994.4130.1|Name=mRNA_L-elsbetiae_contig15994.4130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=846bp|location=Sequence derived from alignment at L-elsbetiae_contig15994:2877..3949+ (Laminarionema elsbetiae ELsaHSoW15)back to top |