mRNA_L-elsbetiae_contig15922.4092.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15922.4092.1
Unique NamemRNA_L-elsbetiae_contig15922.4092.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: A0A2U3CBT5_HEIAB (ACP_syn_III domain-containing protein n=1 Tax=Heimdallarchaeota archaeon (strain B3-JM-08) TaxID=2012493 RepID=A0A2U3CBT5_HEIAB)

HSP 1 Score: 528 bits (1360), Expect = 1.270e-188
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 1
Query:    1 TESDIKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIPSVMTDSTPEDDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLRYL 837
            TESDIKRFRNLGLKNYSKYEGSLASLYVKSIS SIESSGFIPESIDAVIPSVMTDSTPEDDMEMWKALH+SGLNSPAVFGLGCQESATFGGAIDLAKNL+KSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVS HPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLL EANLK CAIDKLFCTNANDPIYTMFSHFSNIDDHKV+KEGL KYGHVNLCDNAVDISSKMQS GISMGENLMLLNWARNLF+GVCLRYL
Sbjct:   28 TESDIKRFRNLGLKNYSKYEGSLASLYVKSISSSIESSGFIPESIDAVIPSVMTDSTPEDDMEMWKALHQSGLNSPAVFGLGCQESATFGGAIDLAKNLVKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSDHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLGEANLKSCAIDKLFCTNANDPIYTMFSHFSNIDDHKVIKEGLRKYGHVNLCDNAVDISSKMQSGGISMGENLMLLNWARNLFSGVCLRYL 306          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI001427E0D9 (hypothetical protein n=1 Tax=Nocardia aobensis TaxID=257277 RepID=UPI001427E0D9)

HSP 1 Score: 81.6 bits (200), Expect = 2.450e-14
Identity = 61/264 (23.11%), Postives = 118/264 (44.70%), Query Frame = 1
Query:   13 IKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIPSVMTDSTPE-DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWA 801
            +     LGL NY     S   +    I+ ++  S   P +ID  + +  T    + ++ E+ +     GL      G+   E A FG A+ LA+ L+ SG  + +L++      + + R+      +VSDGAASC+V+  PA+ EIL+T   +N    A+   D          I ++ ++    L  A +    I ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A
Sbjct:   27 VNTLHELGLSNYRHARDSPIDMAAVCIAETLNQSTLPPSAIDIFMLASSTVGFGQIENTELLQLSERFGLTHATPIGVSAAECANFGTALHLARTLVASGEARTILLVTTDACTTPEQRLLRRVNAVVSDGAASCLVTTEPARIEILATATATNQLIRAATNPDAIAALTRRTLIGLVDDV----LLRAKIDRAQIRQVITNNINTEALRFITLSAGLDHNLTYVDNVADFAHVHSADNLLNLQSYLE-DGAAPDQIVLTISHA 285          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI001D153482 (hypothetical protein n=1 Tax=Nocardia africana TaxID=134964 RepID=UPI001D153482)

HSP 1 Score: 79.7 bits (195), Expect = 9.450e-14
Identity = 54/218 (24.77%), Postives = 105/218 (48.17%), Query Frame = 1
Query:  178 DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLR 831
            ++ E+ +     GL+     G+   E A FG A+ LA+ L+ SG  + VL++      + + R+     ++VSDGAASC+V+  PA+ EIL+T   +N    A+   D          I +++++    L  AN+    I ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A   +A   LR
Sbjct:   64 ENTELLQLSERFGLSHATPIGVSAAECANFGTALHLARTLVASGEARTVLLVTTDACTTPEQRLLRQVNSVVSDGAASCLVTTEPARIEILATATATNQLIRAATNPDAIAALTRRTLIGLVNDV----LSRANIDRDQIRQVITNNINTEALRFMTLSAGLDHNLCYVDNVADFAHVHSADNLLNLQSYLE-DGAAPDQIVLTISHAFGTWALAPLR 276          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI0009FE92C1 (hypothetical protein n=2 Tax=Nocardia TaxID=1817 RepID=UPI0009FE92C1)

HSP 1 Score: 79.7 bits (195), Expect = 1.250e-13
Identity = 64/274 (23.36%), Postives = 124/274 (45.26%), Query Frame = 1
Query:   13 IKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIPSVMTDSTPE-DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLR 831
            +   R +GL  Y     S   +    I+ ++E S      ID ++ +  T    + ++ E+ +     GL      G+   E A FG A+ LA+ L+ SG  + VL++      + + R+     ++VSDGAA+C+V+  PA+ EIL+T   +N    A+   D          I +  E+    L  AN+    + ++   N N       +  + +D +    + + ++ HV+  DN +++ S ++ DG +  + ++ ++ A   +A   LR
Sbjct:   31 LDALREVGLSTYRHARDSPIDMAATCIAETLEHSRMPASEIDILMLASSTIGFGQIENTELLQLSERFGLAHATPIGVSAAECANFGTALHLARTLVASGEARSVLLVTTDACTTPEQRLLRQVNSVVSDGAAACLVTTEPARIEILATATATNQLIRAATTPDTIAALTRRTLIGLADEV----LLRANIDRAQVRQVITNNINTEALRFMTLSAGLDHNLCYLDNVAEFAHVHSADNLLNLQSYLE-DGAAPDQIVLTISHAFGTWALAPLR 299          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: A0A231H3E4_9NOCA (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=14 Tax=Nocardiaceae TaxID=85025 RepID=A0A231H3E4_9NOCA)

HSP 1 Score: 76.6 bits (187), Expect = 1.550e-12
Identity = 53/218 (24.31%), Postives = 102/218 (46.79%), Query Frame = 1
Query:  178 DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLR 831
            ++ E+ +     GL      G+   E A FG A+ LA+ L+ +G  + VL++      + + R+     ++VSDGAASC+V+  PA+ EIL+T   +N    A+   D          I +  E+    L  AN+    + ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A   +A   LR
Sbjct:   87 ENTELLQLSERFGLAHATPIGVSAAECANFGTALHLARTLVTTGEARTVLLVTTDACTTPEQRLLRQVNSVVSDGAASCLVTTEPARIEILATATATNQLIRAATNPDTIAALNRRTLIGLADEV----LLRANIDRAQVRQVITNNINTEALRFMTLSAGLDHNLCYVDNVADFAHVHSADNLINLQSYLE-DGTAPDQIVLTISHAFGTWALAPLR 299          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI0009FD23AC (hypothetical protein n=1 Tax=Nocardia violaceofusca TaxID=941182 RepID=UPI0009FD23AC)

HSP 1 Score: 76.6 bits (187), Expect = 1.550e-12
Identity = 54/218 (24.77%), Postives = 101/218 (46.33%), Query Frame = 1
Query:  178 DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLR 831
            ++ E+ +     GL      G+   E A FG A+ LA+ L+ SG  + VL++      + + R+     ++VSDGAASC+V+  PA+ EIL+T   +N    A+   D          I ++ E+    L  A      I ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A   +A   LR
Sbjct:   87 ENTELLQLSERFGLTHATPIGVSAAECANFGTALHLARTLVASGEARTVLLVTTDACTAPEQRLLRQVNSVVSDGAASCLVTNEPARIEILATATATNQLIRAATNPDAIAALTRRTLIGLVDEV----LLRAKTDRDQIRQVITNNINTEALRFMTLSAGLDHNLSYADNVADFAHVHSADNLLNLQSYLE-DGAAPDQIVLTISHAFGTWAVAPLR 299          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: A0A2S6A6A6_9NOCA (ACP_syn_III domain-containing protein n=2 Tax=Nocardia nova TaxID=37330 RepID=A0A2S6A6A6_9NOCA)

HSP 1 Score: 76.3 bits (186), Expect = 2.120e-12
Identity = 60/269 (22.30%), Postives = 121/269 (44.98%), Query Frame = 1
Query:   13 IKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIPSVMTDSTPE-DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFA 816
            +     +GL  Y     S  ++    I+ ++E S      ID ++ +  T    + ++ E+ +     GL      G+   E A FG A+ LA+ L+ SG  + VL++      + + R+     ++VSDGAASC+V+  PA+ EIL+T   +N    A+   D          + +I ++    L   N+    I ++   N N       +  + +D +    + +  + HV+  DN +++ + ++ DG +  + ++ ++ A   +A
Sbjct:   31 VDALHEVGLATYRHARDSPINMAAACIAGTLEQSRMPASGIDILMLASSTIGFGQIENTELLQLSERFGLARATPIGVSAAECANFGTALHLARTLVASGEARTVLLVTSDACTTPEQRLLRQVNSVVSDGAASCLVTTEPARIEILTTATATNQLIRAATNPDAIAALTRRTLLGLIDDV----LLRTNVDRDEIRQVITNNINTEALRFMTLSAGLDHNLCYADNVADFAHVHSADNLINLQTYLE-DGAAPDQIVLTISHAFGTWA 294          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI000F02C739 (hypothetical protein n=1 Tax=Mycobacterium attenuatum TaxID=2341086 RepID=UPI000F02C739)

HSP 1 Score: 76.3 bits (186), Expect = 2.180e-12
Identity = 57/253 (22.53%), Postives = 118/253 (46.64%), Query Frame = 1
Query:    4 ESDIKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVI-PSVMTDSTPEDDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSG-HPAQFEILSTKVISNPKKAASYKSDLSHGFMIDES-IRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQ 753
            E  +++  ++GL+ Y + + +   L  + I+++I  S    + +D +I  S        D   +   L  +GL      G+   +   FG A+  A +LI     + VL++   +    + R+     +I+SDGAASC++S  HP++ E+L+T   +N K   +  SD+S   +I    ++++S+    LL  ++ +   + KL   N N       +    +   +   E +  +GHV+  D  +++ + ++
Sbjct:   30 EQLLRQVHDVGLRYYHRSDSTPIDLAAEVITQTIAQSPITADEVDVLIFASASVAGGAFDAARVMSMLDNTGLTRATPIGISLSDCGNFGSAMRAAHSLIMGSGARNVLVVTSDVCRDPRSRILTDTLSILSDGAASCLLSAEHPSRLELLATAGRTNQKVRTADLSDMS--LLIRRGLVKVVSD----LLRRSDAELADVGKLMANNVNAEAVRFMTVALGLGPDRAYLENVADFGHVHSADILINLLTYLE 276          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: A0A231GV52_9NOCA (ACP_syn_III domain-containing protein n=1 Tax=Nocardia cerradoensis TaxID=85688 RepID=A0A231GV52_9NOCA)

HSP 1 Score: 75.5 bits (184), Expect = 3.950e-12
Identity = 58/264 (21.97%), Postives = 117/264 (44.32%), Query Frame = 1
Query:   13 IKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIPSVMTDSTPE-DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWA 801
            +     +GL NY     S   +    I+ +++ S      ID ++ +  T    + ++ E+ +     GL      G+   E A FG A+ LA+ L+ +G  + VL++      + + R+     ++VSDGAASC+++   A+ EIL+T   +N    A+   D          I ++       L  AN+    I ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A
Sbjct:   31 VDTLHQVGLSNYRHARDSPIDMAAVCIAETLDQSRMPASGIDILMLASSTIGFGQIENTELLRLSERFGLTHATPIGVSAAECANFGTALHLARTLVTTGEARNVLLVTADACTTPEQRLLRLVNSVVSDGAASCLITTQHARIEILTTSTGTNHLIRAATNPDAIAALTRRTLIGLVDNA----LSRANIDRAQIHQVITNNINTEALRFITLSAGLDHNLTYLDNVADFAHVHSADNLINLQSYLE-DGAAPDQIVLTVSHA 289          
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Match: UPI00188DEFB3 (hypothetical protein n=1 Tax=Nocardia sp. BSTN01 TaxID=2783665 RepID=UPI00188DEFB3)

HSP 1 Score: 75.1 bits (183), Expect = 5.190e-12
Identity = 52/218 (23.85%), Postives = 102/218 (46.79%), Query Frame = 1
Query:  178 DDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLIKSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEILSTKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAIDKLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKMQSDGISMGENLMLLNWARNLFAGVCLR 831
            ++ E+ +     GL      G+   E A FG A+ LA+ LI +G    VL++      + + R+     ++VSDGAASC+++  PA+ EIL+T   +N    A+   D          I ++ ++    L  A++    I ++   N N       +  + +D +    + +  + HV+  DN +++ S ++ DG +  + ++ ++ A   +A   LR
Sbjct:   83 ENTELLQLSERFGLTHATPIGVTAAECANFGTALHLARTLITTGEADTVLLVTTDACTAPEQRLLRQVNSVVSDGAASCLITTEPARIEILTTATATNQLIRAATNPDTIAALTRHTLIDLVDDV----LSRASVDRAQIRQVITNNINTEALRFMTLSAGLDHNLCYCDNVADFAHVHSADNLINLRSYLE-DGAAPDQIVLTISHAFGTWALAPLR 295          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15922.4092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2U3CBT5_HEIAB1.270e-18896.42ACP_syn_III domain-containing protein n=1 Tax=Heim... [more]
UPI001427E0D92.450e-1423.11hypothetical protein n=1 Tax=Nocardia aobensis Tax... [more]
UPI001D1534829.450e-1424.77hypothetical protein n=1 Tax=Nocardia africana Tax... [more]
UPI0009FE92C11.250e-1323.36hypothetical protein n=2 Tax=Nocardia TaxID=1817 R... [more]
A0A231H3E4_9NOCA1.550e-1224.313-oxoacyl-[acyl-carrier-protein] synthase 3 n=14 T... [more]
UPI0009FD23AC1.550e-1224.77hypothetical protein n=1 Tax=Nocardia violaceofusc... [more]
A0A2S6A6A6_9NOCA2.120e-1222.30ACP_syn_III domain-containing protein n=2 Tax=Noca... [more]
UPI000F02C7392.180e-1222.53hypothetical protein n=1 Tax=Mycobacterium attenua... [more]
A0A231GV52_9NOCA3.950e-1221.97ACP_syn_III domain-containing protein n=1 Tax=Noca... [more]
UPI00188DEFB35.190e-1223.85hypothetical protein n=1 Tax=Nocardia sp. BSTN01 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15922contigL-elsbetiae_contig15922:3146..3985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score97.8
Seed ortholog evalue8.4e-18
Seed eggNOG ortholog189753.AXAS01000056_gene5968
KEGG rclassRC00004,RC02729,RC02888
KEGG koko:K00648
KEGG ReactionR10707
KEGG Pathwayko00061,ko01100,ko01212,map00061,map01100,map01212
KEGG ModuleM00082,M00083
Hectar predicted targeting categoryother localisation
EggNOG free text desc.beta-ketoacyl-acyl-carrier-protein synthase III activity
EggNOG OGsCOG0332@1,COG0332@2
EC2.3.1.180
COG Functional cat.I
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons1
Model size840
Cds size840
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815655.1090539-CDS-L-elsbetiae_contig15922:3145..39851622815655.1090539-CDS-L-elsbetiae_contig15922:3145..3985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15922 3146..3985 -
1691683017.769857-CDS-L-elsbetiae_contig15922:3145..39851691683017.769857-CDS-L-elsbetiae_contig15922:3145..3985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15922 3146..3985 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15922.4092.1prot_L-elsbetiae_contig15922.4092.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15922 3146..3985 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15922.4092.1

>prot_L-elsbetiae_contig15922.4092.1 ID=prot_L-elsbetiae_contig15922.4092.1|Name=mRNA_L-elsbetiae_contig15922.4092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
TESDIKRFRNLGLKNYSKYEGSLASLYVKSISRSIESSGFIPESIDAVIP
SVMTDSTPEDDMEMWKALHESGLNSPAVFGLGCQESATFGGAIDLAKNLI
KSGSYKRVLILVGAIRNSIKDRVTLGGETIVSDGAASCIVSGHPAQFEIL
STKVISNPKKAASYKSDLSHGFMIDESIRMISEISKLLLEEANLKPCAID
KLFCTNANDPIYTMFSHFSNIDDHKVVKEGLGKYGHVNLCDNAVDISSKM
QSDGISMGENLMLLNWARNLFAGVCLRYL*
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mRNA from alignment at L-elsbetiae_contig15922:3146..3985-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15922.4092.1 ID=mRNA_L-elsbetiae_contig15922.4092.1|Name=mRNA_L-elsbetiae_contig15922.4092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig15922:3146..3985- (Laminarionema elsbetiae ELsaHSoW15)
ACTGAATCAGATATCAAAAGGTTTAGAAACCTTGGGTTAAAGAATTATTC AAAATATGAAGGATCTCTAGCAAGCCTATATGTGAAGTCTATTTCACGTT CAATTGAATCTAGCGGTTTCATACCAGAGTCAATTGACGCGGTTATTCCT AGTGTAATGACAGACTCTACACCTGAAGATGATATGGAAATGTGGAAGGC TCTACATGAGTCAGGTCTAAACTCTCCGGCGGTTTTTGGGCTAGGCTGTC AAGAGTCAGCAACATTTGGGGGAGCAATTGATTTAGCAAAGAATCTAATC AAGTCAGGGTCTTATAAAAGAGTACTAATATTAGTTGGTGCCATACGTAA TAGCATAAAAGATAGAGTTACTCTTGGAGGTGAGACTATAGTAAGTGACG GAGCAGCGAGCTGCATTGTTTCGGGTCATCCTGCTCAGTTCGAAATACTA TCAACAAAAGTCATATCGAATCCCAAAAAAGCAGCTTCTTACAAGAGCGA CCTTAGTCATGGTTTCATGATTGATGAATCTATAAGAATGATATCGGAAA TCTCGAAACTCCTATTAGAAGAAGCAAATTTAAAACCATGTGCTATAGAT AAACTTTTTTGTACAAACGCCAATGACCCTATATATACAATGTTCTCGCA CTTTTCAAATATTGACGATCATAAAGTTGTTAAAGAAGGGCTTGGAAAGT ATGGTCATGTAAATTTATGCGATAATGCTGTAGATATCTCATCTAAAATG CAATCAGACGGCATTTCAATGGGAGAAAACTTAATGCTGCTTAATTGGGC AAGAAACCTTTTTGCAGGTGTCTGTCTGAGATATCTATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15922:3146..3985-

>mRNA_L-elsbetiae_contig15922.4092.1 ID=mRNA_L-elsbetiae_contig15922.4092.1|Name=mRNA_L-elsbetiae_contig15922.4092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig15922:3146..3985- (Laminarionema elsbetiae ELsaHSoW15)
ACTGAATCAGATATCAAAAGGTTTAGAAACCTTGGGTTAAAGAATTATTC
AAAATATGAAGGATCTCTAGCAAGCCTATATGTGAAGTCTATTTCACGTT
CAATTGAATCTAGCGGTTTCATACCAGAGTCAATTGACGCGGTTATTCCT
AGTGTAATGACAGACTCTACACCTGAAGATGATATGGAAATGTGGAAGGC
TCTACATGAGTCAGGTCTAAACTCTCCGGCGGTTTTTGGGCTAGGCTGTC
AAGAGTCAGCAACATTTGGGGGAGCAATTGATTTAGCAAAGAATCTAATC
AAGTCAGGGTCTTATAAAAGAGTACTAATATTAGTTGGTGCCATACGTAA
TAGCATAAAAGATAGAGTTACTCTTGGAGGTGAGACTATAGTAAGTGACG
GAGCAGCGAGCTGCATTGTTTCGGGTCATCCTGCTCAGTTCGAAATACTA
TCAACAAAAGTCATATCGAATCCCAAAAAAGCAGCTTCTTACAAGAGCGA
CCTTAGTCATGGTTTCATGATTGATGAATCTATAAGAATGATATCGGAAA
TCTCGAAACTCCTATTAGAAGAAGCAAATTTAAAACCATGTGCTATAGAT
AAACTTTTTTGTACAAACGCCAATGACCCTATATATACAATGTTCTCGCA
CTTTTCAAATATTGACGATCATAAAGTTGTTAAAGAAGGGCTTGGAAAGT
ATGGTCATGTAAATTTATGCGATAATGCTGTAGATATCTCATCTAAAATG
CAATCAGACGGCATTTCAATGGGAGAAAACTTAATGCTGCTTAATTGGGC
AAGAAACCTTTTTGCAGGTGTCTGTCTGAGATATCTATGAACTGAATCAG
ATATCAAAAGGTTTAGAAACCTTGGGTTAAAGAATTATTCAAAATATGAA
GGATCTCTAGCAAGCCTATATGTGAAGTCTATTTCACGTTCAATTGAATC
TAGCGGTTTCATACCAGAGTCAATTGACGCGGTTATTCCTAGTGTAATGA
CAGACTCTACACCTGAAGATGATATGGAAATGTGGAAGGCTCTACATGAG
TCAGGTCTAAACTCTCCGGCGGTTTTTGGGCTAGGCTGTCAAGAGTCAGC
AACATTTGGGGGAGCAATTGATTTAGCAAAGAATCTAATCAAGTCAGGGT
CTTATAAAAGAGTACTAATATTAGTTGGTGCCATACGTAATAGCATAAAA
GATAGAGTTACTCTTGGAGGTGAGACTATAGTAAGTGACGGAGCAGCGAG
CTGCATTGTTTCGGGTCATCCTGCTCAGTTCGAAATACTATCAACAAAAG
TCATATCGAATCCCAAAAAAGCAGCTTCTTACAAGAGCGACCTTAGTCAT
GGTTTCATGATTGATGAATCTATAAGAATGATATCGGAAATCTCGAAACT
CCTATTAGAAGAAGCAAATTTAAAACCATGTGCTATAGATAAACTTTTTT
GTACAAACGCCAATGACCCTATATATACAATGTTCTCGCACTTTTCAAAT
ATTGACGATCATAAAGTTGTTAAAGAAGGGCTTGGAAAGTATGGTCATGT
AAATTTATGCGATAATGCTGTAGATATCTCATCTAAAATGCAATCAGACG
GCATTTCAATGGGAGAAAACTTAATGCTGCTTAATTGGGCAAGAAACCTT
TTTGCAGGTGTCTGTCTGAGATATCTATGA
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