mRNA_L-elsbetiae_contig1588.4070.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: D7FK98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK98_ECTSI) HSP 1 Score: 544 bits (1402), Expect = 3.310e-171 Identity = 417/927 (44.98%), Postives = 471/927 (50.81%), Query Frame = 1 Query: 283 MCWDGLSSLWVFGGQGATTSRADSSRTHQGVKIRSLAKRTCFNDFFEFDTKKLEWRD-------HVQAGV-CPTSRRGHTATLVLGRRTVDTAQQEDQGSPENSVDAAYGDSSGLGPDTSNDSGEARSQTWGGEAETRNVNGGSGSNGNVTPRPPG-ITPRRRSSPAKG-------------------------GRSGGVGSRRGDGVGIGGGGGLNKHCESREMFVIGGAGTDPIRNMEVVYPQLWIFDFDRSTWTCVEAAGGPGTPSGAGXXXXXXXXXXXAAGSGPPAVFDHTATLAGG-HIVVIGGVMVGKALNSEVYTLALDTLQWSVLDPHPLGFSAPSLHGHTAVEDPTRAGRLIVFGGRGGSNWNTQVLTFESKKQLWSMAVCDTA--PLDEGATTATNNXXXXXXXXXXXXXXXXXXXXXXXXXNSGGPLRVTIREGPVTGSAEPPRDGNRGGDANGTATXXXXXXXXXXXXXXXXXXXXXXXXXXDCNTGVRVDPNGPPAATNPAVTFSSSXXXPAGALATGGGVGNATGAAATTDAVPLAVMPHQ--RHGHTCFVWDPRDTVLTSGGGSDAGGGAD-------------RGAPPSPPKRGQRKVRRGRSIIDGSYRCVALSTARRPLPSPTSTRASCFPTSAPGKSGEGGXXXXSGRSSPTRSRXXXXXXSRNKSNARGGEELVSDDCPPSPCIITFGGSALRTGGGYAQAALHVLEAPAPEGGGRGXXXXXXXXXXXXXARAVEGGRRSSSP--GLLGLLESAASTRKQSFNKFQTCTKSVLLKVHSLRQLGKEKLTFGDSYDPEDLSYVDFKVRSVIMGEDSVKLKHSSGGSSSGSHAMSSPXXXXXXVGGAGEKNGAAGEVKP-HPGAGRLGVFPTGYEQ--VKAFLADARPANFR-RPASAPAHF-DPGGGN 2886 MCWDGLSSLWVFGGQGA TS+ADSSRTHQGVKIR+LA+RTCFNDFFEFDTK+L H++A C R T L LG D A G R + S +GN TPR PG ITPR+RS +G GR+ CESREMFVIGGAGTDPIRNMEVVYPQLWIFDF+R TWTCVEAAG XXXXXXXXXX G GPPAVFDHTATLAGG HIVVIGGVMVG+ALNS+VY LALDTLQWS L+PHPLGFSAP++HGHTAVEDP AGRLI+FGGRGG +WNTQVLTF+ +K LWSMAVCD A P DE T+ +S PLRVTI + PV G EP R G+ +P PA +P T PL Q RHGHTCFVWDPR L +D GGG RG P SP KRG + GRS XXXX XXXXX SRN+ +D+ P PCI+TFGGSALRTGGGYA+AALHVLE PAPE + GGR++SSP G+L LE AA KQ+FNKFQ+ T SVLLKVHSLRQLG E+LTFGDSY+PEDLSY+D KV+SV++G L+ + GS ++ +SP G K +VKP HPGAGRLG FPTGYEQ VKAFLADARPAN R RP SAPAH +PGGG+ Sbjct: 1 MCWDGLSSLWVFGGQGAATSKADSSRTHQGVKIRTLARRTCFNDFFEFDTKRLVAGPRPGGSLPHLEAWAHCDPRSRAATRDLNLGN------------------DGASG--------------------------YRRADSESVGHGNSTPRSPGRITPRKRSGEGEGXXXXXXXXXXXXXXXXXXXXXXXXMGRA---------------------SCESREMFVIGGAGTDPIRNMEVVYPQLWIFDFNRRTWTCVEAAGXXXXXXXX--XXXXXXXXXXXXGPGPPAVFDHTATLAGGTHIVVIGGVMVGRALNSQVYMLALDTLQWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKSWNTQVLTFQFRKNLWSMAVCDMAEPPPDELNANQTS--------------------AARGKRSSASPLRVTILDNPVIGRTEPSRGGSD-------------------------------------------EPKAAPAPPSPNNTDDERPQHE-----------------------PLGEPGQQAKRHGHTCFVWDPRQAALAC---NDGGGGXXXXXXXXXXXXDGARGLPVSP-KRGSQNRGSGRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXRSRNRRTPT--PSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPE---------------DNDSDNDGGGRKASSPSTGILASLELAADAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGGRTLE--ADGSDEDRNSKTSPAATTAG----GSKAKTRADVKPPHPGAGRLGSFPTGYEQARVKAFLADARPANARIRPVSAPAHLVEPGGGS 740
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: A0A6H5JRA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA7_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 5.810e-155 Identity = 401/995 (40.30%), Postives = 468/995 (47.04%), Query Frame = 1 Query: 292 DGLSSLWVFGGQGATTSRADSSRTHQGVKIRSLAKRTCFNDFFEFDTKKLEWRDHVQAGVCPTSRRGHTATLVLGRRTVDTAQQEDQGSPENSVDAAYGDSSGLGPDTSNDSGEARSQTWGGEAETRNVNGGSGSNGNVTPRPPG-ITPRRRSSPAKGGRSGGVGS------------RRGDGVGIGGGGGLNKHCESREMFVIGGAGTDPIR-----------------------------------------------NMEVVYPQLWIFDFDRSTWTCVEAAGGPGTPSGAGXXXXXXXXXXXAAGSGPPAVFDHTATLAGG-HIVVIGGVMVGKALNSEVYTLALDTLQWSVLDPHPLGFSAPSLHGHTAVEDPTRAGRLIVFGGRGGSNWNTQ-----VLTFESKKQLWSMAVCDTA--PLDEGATTATNNXXXXXXXXXXXXXXXXXXXXXXXXXNSGGPLRVTIREGPVTGSAEPPRDGNRGGDANGTATXXXXXXXXXXXXXXXXXXXXXXXXXXDCNTGVRVDPNGPPAATNPAVTFSSSXXXPAGALATGG---------------GVGNATGAAATTDAVPLAVMPHQRHGHTCFVWDPRDTVLT-SGGGSDAGGGADRGAPPSPPKRGQRKVRRGRSIIDGSYRCVALSTARRPLPSPTSTRASCFPTSAPGKSGEGGXXXXSGRSSPTRSRXXXXXX-------------------SRNKSNARGGEELVSDDCPPSPCIITFGGSALRTGGGYAQAALHVLEAPAPEGGGRGXXXXXXXXXXXXXARAVEGGRRSSSP--GLLGLLESAASTRKQSFNKFQTCTKSVLLKVHSLRQLGKEKLTFGDSYDPEDLSYVDFKVRSVIMGEDSVKLKHSSGGSSSGSHAMSSPXXXXXXVGGAGEKNGAAGEVKP-HPGAGRLGVFPT-------------------------GYEQVKAFLADARPANFR-RPASAPAHF-DPG 2877 DGLSSLWVFGGQGA TS+ADSSRTHQGVKIR+LA+RTCFNDFFEFDTK++ D S GH RR DS +G +GN TPR PG ITPR+ +GGR G G GDG G+G ESREMFVIGGAGTDPIR NMEVVYPQLWIFDF+R TWTCVEAAGG G AAG GPPAVFDHTATLAGG HIVVIGGVMVG+ALN +VY LALDTLQWS+L+PHPLGFSAP++HGHTAVEDP AGRLI+FGGRGG NWNTQ VLT + +K LWSMAVCD P DE ++ +S PLRVTI + PV G +P +RGG A R +P P NP + S AG LA+GG A + A +A+MPHQRHGHTCFVWDPR L +GGG++AG G R++C G GG S +SSP R R XX SRN+ +D+ P PCI+TFGGSALRTGGGYA+AALHVLE PAPE GGRG GGR+ SSP G+L LESAA KQ+FNKFQ+ T SVLLKVHSLRQLG E+L+FGDSY+P+DLSY+D KV+SV++G L+ + GS ++ ++ G + VKP HP AGRLG + + G+ QVKAF+ADARP N R RP SAPAH +PG Sbjct: 27 DGLSSLWVFGGQGAATSKADSSRTHQGVKIRTLARRTCFNDFFEFDTKRVLGND---------SASGH-------RRA---------------------DSESVG------------------------------HGNSTPRSPGRITPRKWRGEGEGGRRGAGGGXXXXXXXXXXXRESGDG-GMG-----RAFGESREMFVIGGAGTDPIRPPAAFVVAPRATSAGNLRMAAQPCLYTSVLPKTRSSPNPPYVRYATKNMEVVYPQLWIFDFNRRTWTCVEAAGGGGAXXXG---ISKGNIPSAAAGPGPPAVFDHTATLAGGTHIVVIGGVMVGRALNGQVYMLALDTLQWSILEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQGGNGKVLTCQFRKNLWSMAVCDMGEPPPDELNANQSSTSKGKR--------------------SSASPLRVTILDNPVIGKTQP----SRGGSDEPIAAPATPSPNNTDDERPQNEP--------------RREPGQQPKVKNPPPSSSL-----AGILASGGLKXXXXXXXXXXXXXXXXXXKAATEHSAAAMVAMMPHQRHGHTCFVWDPRQAALACNGGGAEAGDGXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXRSNC---------GAGGGA--SRKSSPKRPRGGENXXXXPLPSSRKXXXXXXXXXRSRNRRTPM--PSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDGGRGNDDNDSDKDG--------GGRKGSSPSTGILASLESAAGAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLSFGDSYNPDDLSYIDLKVQSVVLGVGGRTLE--ADGSDEDRNSTTAE----------GSRAIKRANVKPPHPCAGRLGSYQSIFSDSKTRVTQPSVCNTTRAGGFWSGFPQVKAFIADARPPNARIRPVSAPAHLVEPG 853
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: A0A8J2SDP5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDP5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.190e-15 Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 109 PPMRINCASALLGGELYLFGGLNAGPSRSLWALNVRERRWRPIFAKRGEAPAPRQGHTMCWDG-LSSLWVFGGQGATTSRADSSRTHQGVKIRSL-----AKRTCFNDFFEFDTKKLEWRDHVQAGVCPTSRRGHTATLVLGRRTVDTAQQ 543 PPMR + AS +LG ++Y+FGGL AG S LWAL+ RW + G P R T+ D ++++FGG G + D + GV +L A+R+ F+D + FD W + +CP RRGHTAT GR V+ ++ Sbjct: 18 PPMRTHAASCVLGSKVYVFGGLGAGASNQLWALDTILHRWERLLPP-GPKPPARSAATLAGDDDAHAVYLFGGLGRV--KRDYLKKRDGVPGATLRTQLHAQRSMFSDVWRFDGTAKRWEELTFIHMCPAPRRGHTATYCSGRVLVEEPEE 165
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: UPI00148F8CA4 (rab9 effector protein with kelch motifs n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F8CA4) HSP 1 Score: 63.2 bits (152), Expect = 2.680e-6 Identity = 43/150 (28.67%), Postives = 67/150 (44.67%), Query Frame = 1 Query: 109 PPMRINCASALLGGELYLFGGLNAGPS--RSLWALNVRERRWRPIFAKRGEAPAPRQGHTMCWDGLSSLWVFGGQGATTSRADSSRTHQGVKIRSLAKRTCFNDFFEFDTKKLEWRDHVQAGVCPTSRRGHTATLVLGRRTVDTAQQEDQ 552 PP +SAL+G +L+LFGG +AG + L LN W+ K GE+PA G T+ +++FGG+ S G + T ND + K++W+ + G+ P R HTA ++ V + E+Q Sbjct: 179 PPALYGQSSALVGDQLFLFGGYDAGGDFCKDLHVLNTESLIWQKWEVK-GESPAACSGQTLSAHHDKDIYLFGGK---------STNEDGTE-------TSLNDIHKLSIAKMKWKVPLYVGIPPARRHEHTAFILHSHLYVFGGKNEEQ 311
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: A0A7S0RVP8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RVP8_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 2.300e-5 Identity = 35/110 (31.82%), Postives = 48/110 (43.64%), Query Frame = 1 Query: 196 LWALNVRERRWRPI-----FAKRGEAPAPRQGHTMCWDGLSSLWVFGGQGATTSRADSSRTHQGVKIRSLAKRTCFNDFFEFDTKKLEWRDHVQAGVCPTSRRGHTATLV 510 LW L+ + RP A+RG PAPR+GH++CWDG L FGG AT G+ + F + EW +G PT R H+AT++ Sbjct: 112 LWTLDTQ----RPAAGFKQVAERGRVPAPRRGHSLCWDGEDQLVCFGGTNAT-----------GIDAQLCV----------FSISRQEWSVPTTSGPAPTPRTQHSATMI 196
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Match: A0A7S2XVA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVA1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 6.130e-5 Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 1 Query: 847 REMFVIGGAGTDPIRNMEVVYPQLWIFDFDRSTWTCVEAAGGPGTPSGAGXXXXXXXXXXXAAGSGPPAVFDHTATLAGGHIVVIGGV 1110 RE+ V+GGAG D ++ +EV++ + W+F+ D +W V G P PA F+HTATL + +IGG+ Sbjct: 74 REIIVVGGAGPDSVKGVEVIFAETWLFNLDAHSWRQVATTGPPS-----------------------PARFEHTATLIKSTLFLIGGL 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1588.4070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1588.4070.1 >prot_L-elsbetiae_contig1588.4070.1 ID=prot_L-elsbetiae_contig1588.4070.1|Name=mRNA_L-elsbetiae_contig1588.4070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1173bp MRGKDEPGWKSSTNQALAKVCRKRWRPLALAAGSPTPPMRINCASALLGGback to top mRNA from alignment at L-elsbetiae_contig1588:3935..16948+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1588.4070.1 ID=mRNA_L-elsbetiae_contig1588.4070.1|Name=mRNA_L-elsbetiae_contig1588.4070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13014bp|location=Sequence derived from alignment at L-elsbetiae_contig1588:3935..16948+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1588:3935..16948+ >mRNA_L-elsbetiae_contig1588.4070.1 ID=mRNA_L-elsbetiae_contig1588.4070.1|Name=mRNA_L-elsbetiae_contig1588.4070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7038bp|location=Sequence derived from alignment at L-elsbetiae_contig1588:3935..16948+ (Laminarionema elsbetiae ELsaHSoW15)back to top |