mRNA_L-elsbetiae_contig15674.3969.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: D7FVZ8_ECTSI (Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVZ8_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 1.260e-187 Identity = 291/358 (81.28%), Postives = 309/358 (86.31%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERLGVSPAPAXXXAWAPSAAATNGGAGGG------------KSEFDQLAAFTTIVADTGEIEAIRKYQPTDATTNPSLIYAAAQMPAYQSFVDDAVQHALGVKG 1038 V+DDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATL RA NII LY+AAGVDKSRILIKIASTWEGIKACE+LQKEGI+CN+TLLFALPQAAACAEAGATLISPFVGRI+DYHKKKTGNSYPD DPGCISVSEIYGYYKKHGY TIVMGASFRSK EVLQLAGCDRLTIAPKFL ELQ S+ +VVQHLEASASAA+CTLDKL SESAFR AMNDD MATSKLAEGIRGFSADLVKLE TVR+RLGV+P+ XXX K+EFDQLA TTIVAD+GEIEAIRKY+PTDATTNPSLIYAAAQMPAYQ FVDDAV+HALG++G Sbjct: 75 VTDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLARARNIISLYEAAGVDKSRILIKIASTWEGIKACEVLQKEGITCNMTLLFALPQAAACAEAGATLISPFVGRILDYHKKKTGNSYPDAWQDPGCISVSEIYGYYKKHGYGTIVMGASFRSKDEVLQLAGCDRLTIAPKFLAELQESNGEVVQHLEASASAAACTLDKLPSSESAFRLAMNDDPMATSKLAEGIRGFSADLVKLEATVRDRLGVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEFDQLAEVTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMPAYQGFVDDAVKHALGLQG 432
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A7R9UIC3_9STRA (Transaldolase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UIC3_9STRA) HSP 1 Score: 364 bits (935), Expect = 8.590e-120 Identity = 196/341 (57.48%), Postives = 245/341 (71.85%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERLGVSPAPAXXXAWAPSAAATNGGAGGGKSEFDQLAAFTTIVADTGEIEAIRKYQPTDATTNPSLIYAAAQMPAYQSFVDDAVQHA 1023 V +DE V MDKLSVNFG EIL +V GYVSTEVDARLSFDTE TL+RA II +Y+ G+ K R+LIKIASTWEGI+AC++LQ EG+ CN+TLLF+L QAAACA+AGATLISPFVGRI D++K K G S+ + A DPG +SV IY YYK GY TIVMGASFR+ G++ +LAGCDRLTI+P L+EL AS + V L+ S T+DKL+ +E AFR AM++D MAT+KLAEGIR FSAD+ LET V ++ A G+S F+QL TTIVADTG+I++I+K +PTDATTNPSL+Y AA +P Y + +++AV A Sbjct: 145 VPEDELVPLIMDKLSVNFGAEILGIVPGYVSTEVDARLSFDTEGTLKRARRIIQMYEEIGISKDRVLIKIASTWEGIQACKVLQLEGVQCNMTLLFSLAQAAACADAGATLISPFVGRISDWYKAKEGRSF-EAAEDPGVLSVQTIYRYYKALGYPTIVMGASFRNTGQITELAGCDRLTISPGLLDELAASSEAVPTKLDPSQPN---TIDKLENTEMAFRWAMSEDPMATAKLAEGIRKFSADIESLETVVNRKIVEKRAE-------------------GRSAFEQLQLLTTIVADTGDIKSIKKVKPTDATTNPSLLYKAATLPEYANLLEEAVASA 462
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: W7U1X5_9STRA (Transaldolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1X5_9STRA) HSP 1 Score: 360 bits (925), Expect = 1.770e-116 Identity = 189/337 (56.08%), Postives = 241/337 (71.51%), Query Frame = 1 Query: 4 SDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERLGVSPAPAXXXAWAPSAAATNGGAGGGKSEFDQLAAFTTIVADTGEIEAIRKYQPTDATTNPSLIYAAAQMPAYQSFVDDAV 1014 SD ER+A TMD+L+VNFG EI +V GYVSTEVDARLS+D + TL+RA II +Y+ G+ K RILIKIASTWEGIKA E L++EG+ NLTLLF+L QA A AEAGATL+SPFVGRI+D+ KK+TG ++ D DPG SV +IYGYYKK+GY TIVMGASFR+KGE+ LAGCDRLTI+P L+EL+ D + + LE ++ +++ E +FR AMN DAMAT+KLAEGIRGF+AD+ KLE + + L V P+ +F QLA FTT+V DTG++EAI++ +PTDATTNPSLI+ AA +P Y+ VD A+ Sbjct: 75 SDSERLAATMDRLAVNFGAEITKIVPGYVSTEVDARLSYDKDETLKRARRIIGMYKELGISKERILIKIASTWEGIKAAEALEQEGVKTNLTLLFSLAQAVAAAEAGATLVSPFVGRILDWWKKETGKTFADAEEDPGVQSVRQIYGYYKKYGYETIVMGASFRNKGEITALAGCDRLTISPGLLDELKDCHDPLPRVLEPENGSSFYDGERIRVDEKSFRLAMNADAMATAKLAEGIRGFAADIEKLEAMIAKML-VPPS----------------------DQFSQLAVFTTLVCDTGDVEAIKRLKPTDATTNPSLIFKAASLPQYKPLVDSAI 388
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A6H5KCB8_9PHAE (Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB8_9PHAE) HSP 1 Score: 337 bits (864), Expect = 2.950e-112 Identity = 176/214 (82.24%), Postives = 184/214 (85.98%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKL 642 V+DDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATL RA NII LY+AAGVDKSRILIKIASTWEGIKACE AAACAEAGATLISPFVGRI+DY+KKKTGNSYPD + DPGCISVSEIYGYYKKHGY TIVMGASFRSK EVLQLAGCDRLTIAPKFL ELQ S +VVQHLEASASAA+CTLDK+ Sbjct: 75 VTDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLARARNIISLYEAAGVDKSRILIKIASTWEGIKACE-------------------AAACAEAGATLISPFVGRILDYYKKKTGNSYPDASQDPGCISVSEIYGYYKKHGYGTIVMGASFRSKDEVLQLAGCDRLTIAPKFLAELQESKGEVVQHLEASASAAACTLDKV 269
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A067DAI4_SAPPC (Transaldolase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067DAI4_SAPPC) HSP 1 Score: 330 bits (847), Expect = 3.520e-109 Identity = 168/257 (65.37%), Postives = 205/257 (79.77%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERL 771 V+D+ER+ +D+LSVNFG +IL +V GYVSTEVDARLSFDT AT++RAH II +Y+AAG+ K RILIKIASTWEGI+AC+ LQ+EGI CN+TLLF PQA ACAEA ATLISPFVGRI+D++K KTG +Y DPG +SV+ IY YYKKHGY+TIVMGASFR+ GEVL+LAGCDRLTI+P LEEL S D V + L+A A+ A+ K+ SE FR AMN+DAMAT KL+EGIRGF AD+VKLE ++ +L Sbjct: 65 VTDEERLGHIIDQLSVNFGKKILEIVPGYVSTEVDARLSFDTAATIDRAHRIIGMYEAAGISKDRILIKIASTWEGIEACKFLQQEGIKCNMTLLFGFPQAVACAEADATLISPFVGRILDWYKAKTGKTYTS-VEDPGVVSVTNIYNYYKKHGYSTIVMGASFRNTGEVLELAGCDRLTISPNLLEELANSTDVVTKKLDAEAAQANYNGAKVTFSEKEFRFAMNEDAMATEKLSEGIRGFCADIVKLEDILKAKL 320
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A0P1AH91_PLAHL (Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH91_PLAHL) HSP 1 Score: 329 bits (844), Expect = 1.550e-108 Identity = 164/259 (63.32%), Postives = 204/259 (78.76%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERLGV 777 +++ ER+ +DKLSVNFG+EIL +V GYVSTEVDARLSFDT+ T+ RAH II+LY+ AG+ K RILIKIASTWEGI+AC+ LQKEGISCN+TLLF QA CAEAGATLISPFVGRI+D+HK K G S +P DPG +SV+ IY YYKK+ Y TIVMGASFR+ GE+ +LAGCDRLTI+P LEEL S + + + L+ +A +C+++KL E FR +MN+DAMAT KLAEGIRGFSAD+VKLE ++ +L V Sbjct: 76 LTEKERLGYVIDKLSVNFGLEILKVVPGYVSTEVDARLSFDTKNTIARAHRIIELYEKAGIQKDRILIKIASTWEGIQACKHLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKIGKSSYEPHEDPGVVSVTSIYQYYKKYNYQTIVMGASFRNTGEITELAGCDRLTISPALLEELAESTEALTKKLDPETAAKACSIEKLSFDEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKLRV 334
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A662XW57_9STRA (Transaldolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XW57_9STRA) HSP 1 Score: 327 bits (838), Expect = 1.250e-107 Identity = 164/257 (63.81%), Postives = 203/257 (78.99%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERL 771 VS+ +R+ +DKLSVNFG+EIL +V GYVSTEVDARLSFDTEAT+ RAH I++LY+ AG+ K RILIKIASTWEGI+AC+ LQKEGISCN+TLLF QA CAEAGATLISPFVGRI+D+HK KTG S + DPG +SV++IY YYKK+GY TIVMGASFR+ GE+ +L GCDRLTI+P LE+L S D + + L+ SA + +K+ +E FR +MN+DAMAT KLAEGIRGFSAD+VKLE ++ +L Sbjct: 76 VSEKDRLGYIIDKLSVNFGLEILKIVPGYVSTEVDARLSFDTEATIARAHRILELYEKAGITKDRILIKIASTWEGIQACKQLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYEAHEDPGVVSVTKIYQYYKKYGYKTIVMGASFRNTGEITELTGCDRLTISPNLLEDLTKSTDKLEKKLDEEESAKAYVGEKISYAEKDFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKL 332
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: A0A024GRW7_9STRA (Transaldolase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRW7_9STRA) HSP 1 Score: 326 bits (835), Expect = 2.390e-107 Identity = 168/257 (65.37%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERL 771 VSD ER+A +DKL+VNFG+EIL +V GYVSTEVDARLSFDT T+ERAH IIDLYQ G+ K RILIKIASTWEGI+AC+ L+KEGI CN+TLLF QAAACAEAGATLISPFVGRI+D++K KTG S P DPG +SV+ IY Y KK+GY TIVMGASFR+ E+L+LAGCDRLTI+P LEEL + V + L+ +++A + +KL SE FR MNDDAMAT KLAEGIRGFSAD+VKLE + +++ Sbjct: 66 VSDRERLAHVVDKLAVNFGLEILKIVPGYVSTEVDARLSFDTVETIERAHRIIDLYQKEGIGKERILIKIASTWEGIQACKKLEKEGIHCNMTLLFGFAQAAACAEAGATLISPFVGRILDWYKAKTGLSSYKPEEDPGVVSVTNIYRYLKKYGYKTIVMGASFRNTEEILELAGCDRLTISPSLLEELATKETPVSRKLDETSAAKAYEGEKLMLSEKDFRLLMNDDAMATEKLAEGIRGFSADIVKLEAILSDKM 322
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: K3WK76_GLOUD (Transaldolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK76_GLOUD) HSP 1 Score: 326 bits (836), Expect = 2.430e-107 Identity = 163/257 (63.42%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERL 771 +S+ ER+ +DKLSVNFG+EIL +V GYVSTEVDARLSFD EAT+ RAH II++Y+ AG+ K RIL+KIASTWEGI+AC+ LQ EGISCN+TLLF QA CAEA ATLISPFVGRI+D+HK KTG S + DPG +SVS+IY YYKK GY TIVMGASFR+ GE+ +LAGCDRLTI+P L+EL S + + + L+ ++AA T +KL SE FR ++N+DAMAT KLAEGIRGFSAD+VKLE ++ +L Sbjct: 75 ISESERLGYIIDKLSVNFGLEILKIVPGYVSTEVDARLSFDKEATIARAHRIIEMYKKAGISKDRILVKIASTWEGIQACKELQAEGISCNMTLLFGFAQAVGCAEANATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVSKIYQYYKKFGYKTIVMGASFRNVGEITELAGCDRLTISPNLLDELSKSTEPISRKLDEESAAAKYTGEKLSLSEKGFRLSLNEDAMATEKLAEGIRGFSADIVKLEDILKAKL 331
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Match: H3G883_PHYRM (Transaldolase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G883_PHYRM) HSP 1 Score: 323 bits (829), Expect = 2.880e-106 Identity = 163/257 (63.42%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 1 VSDDERVAKTMDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGVDKSRILIKIASTWEGIKACEILQKEGISCNLTLLFALPQAAACAEAGATLISPFVGRIMDYHKKKTGNSYPDPATDPGCISVSEIYGYYKKHGYNTIVMGASFRSKGEVLQLAGCDRLTIAPKFLEELQASDDDVVQHLEASASAASCTLDKLDPSESAFRQAMNDDAMATSKLAEGIRGFSADLVKLETTVRERL 771 +S+ ER+ +DKLSVNFG+EIL +V GYVSTEVDARLSFDTE+T+ RAH IIDLY+ AG+ K RILIKIASTWEGI+AC+ LQ+EGISCN+TLLF QA CAEAGATLISPFVGRI+D+HK KTG S + DPG +SV++IY YYKK+ Y TIVMGASFR+ GE+ +LAGCDRLTI+P LEEL + + + L++ + + T +KL E FR +MN+DAMAT KLAEGIRGFSAD+VKLE ++ +L Sbjct: 76 LSEKERLGYVIDKLSVNFGLEILKVVPGYVSTEVDARLSFDTESTIARAHRIIDLYEKAGIKKDRILIKIASTWEGIQACKKLQEEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVTKIYQYYKKYDYKTIVMGASFRNTGEITELAGCDRLTISPNLLEELTKTTTKLEKKLDSETAGKAYTGEKLSYDEKDFRVSMNEDAMATEKLAEGIRGFSADIVKLEQILKAKL 332 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15674.3969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15674.3969.1 >prot_L-elsbetiae_contig15674.3969.1 ID=prot_L-elsbetiae_contig15674.3969.1|Name=mRNA_L-elsbetiae_contig15674.3969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp MDKLSVNFGVEILTLVKGYVSTEVDARLSFDTEATLERAHNIIDLYQAAGback to top mRNA from alignment at L-elsbetiae_contig15674:212..3829- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15674.3969.1 ID=mRNA_L-elsbetiae_contig15674.3969.1|Name=mRNA_L-elsbetiae_contig15674.3969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3618bp|location=Sequence derived from alignment at L-elsbetiae_contig15674:212..3829- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15674:212..3829- >mRNA_L-elsbetiae_contig15674.3969.1 ID=mRNA_L-elsbetiae_contig15674.3969.1|Name=mRNA_L-elsbetiae_contig15674.3969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2058bp|location=Sequence derived from alignment at L-elsbetiae_contig15674:212..3829- (Laminarionema elsbetiae ELsaHSoW15)back to top |