mRNA_L-elsbetiae_contig156.3920.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: D7FZK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK6_ECTSI) HSP 1 Score: 333 bits (853), Expect = 1.020e-109 Identity = 161/189 (85.19%), Postives = 176/189 (93.12%), Query Frame = 3 Query: 24 GVGGLRAAIEVDVGQELEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPLANNRLFRGGEDGGEVAIMIHPHDIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVVGLPNDVVLETKRMRDMELWGRIEFALKKKVEQ 590 GVGGL+A+ EV++ + LEIGSVLVAGADNYG MTFKAVALVYEHGEG P+RAVCVDKG+DFTIGEMS+GDLGPL+NNRLFRGG+DGGE AIMIHPHDI G+RPLGDTGLFVGGFV+ALDLVEE AKPGDFKFFFNHL+WPAGAL EQV KGLWKVV LPNDV+LETKRMRDMELWGRIEFAL+KK EQ Sbjct: 10 GVGGLQASFEVELDRGLEIGSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTGDLGPLSNNRLFRGGDDGGEAAIMIHPHDIMGSRPLGDTGLFVGGFVTALDLVEENKAKPGDFKFFFNHLSWPAGALQEQVGKGLWKVVRLPNDVLLETKRMRDMELWGRIEFALQKKAEQ 198
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A6H5KYX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX8_9PHAE) HSP 1 Score: 329 bits (844), Expect = 1.950e-107 Identity = 160/189 (84.66%), Postives = 174/189 (92.06%), Query Frame = 3 Query: 24 GVGGLRAAIEVDVGQELEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPLANNRLFRGGEDGGEVAIMIHPHDIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVVGLPNDVVLETKRMRDMELWGRIEFALKKKVEQ 590 GVGGL+AA EV++ + LEIGSVLVAGADNYG MTFKAVALVYEHGEG P+RAVCVDKG+DFTIGEMS+GDLGPL+NNRLFRGG+DGGE AIMIHPHDI G+RPLGDTGLFVGGFV+ALDLVEE AKP DFKFFFNHL+WPAGAL EQV KGLWKVV LP DV+LETKRMRDMELWGRIEFAL+KK EQ Sbjct: 71 GVGGLQAAFEVELDRGLEIGSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTGDLGPLSNNRLFRGGDDGGEAAIMIHPHDIMGSRPLGDTGLFVGGFVTALDLVEENKAKPSDFKFFFNHLSWPAGALQEQVGKGLWKVVRLPKDVLLETKRMRDMELWGRIEFALQKKAEQ 259
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A835YY37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY37_9STRA) HSP 1 Score: 166 bits (420), Expect = 6.200e-45 Identity = 84/172 (48.84%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 39 RAAIEVDVGQELEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPLANNRLFRGGEDGGEVAIMIHPH-DIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVVGLPNDVVLETKRMRDMELW 551 R A+ V + L+ G VLVA ++YGH T K+VALV+E+ ++AV +D+G FTIGEM+S D+GPLANNRL+RGGEDGG +MIH D+ GA+ +GD+ LFVGG +A + V G A+ +FKFFFN + W G L EQVEKG W + L ++ +D ELW Sbjct: 40 RCALSVQPVEGLDAGVVLVASKNDYGHFTMKSVALVFEYSM-EASKAVVLDRGSPFTIGEMTSLDMGPLANNRLYRGGEDGGSAVVMIHMRGDLAGAQQIGDSDLFVGGLQAAKEAVASGQAQASEFKFFFNFMRWSPGGLEEQVEKGKWSTIFLDKSAIMAQASNKDQELW 210
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A7S4A408_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A408_9STRA) HSP 1 Score: 112 bits (280), Expect = 9.420e-25 Identity = 72/176 (40.91%), Postives = 94/176 (53.41%), Query Frame = 3 Query: 66 QELEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDL--GPLANNRLFRGGEDGGEVAIMIHP-HDIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVV-GLPNDVVLETKRMRDM-ELWGRIEFALKK 578 Q G V++A + Y H +A LV EH E R + V +D TIGE + G L LA NRLF GGE GG+ A MIH D+ GAR LG + LF+GG A V G +P DFKFFFN W G L + + G W+ + G+P +VVL+ D +LW + A K+ Sbjct: 52 QRAAAGQVVLAPRNEYNHFLRQAAVLVVEHTE-RGSLGVSLDSPTLLTIGEAAKGLLEDSELAENRLFMGGEYGGDSATMIHACEDVAGARRLGGSDLFLGGLADAAKRVNAGINRPEDFKFFFNFCKWAPGELDDAIADGRWRALTGVPREVVLDQDPFADRGKLWRTLGRAAKR 226
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A8J6CH84_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CH84_DIALT) HSP 1 Score: 107 bits (266), Expect = 2.120e-23 Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 66 QELEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPLANNRLFRGGEDGGEVAIMIHPH-DIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLW 485 + L G+VLV+ D Y H +AV LV EH E +R V +++ FT+GEM+SG +G + + RGG G + +M+H D+ G++P+G +GL++GG A LV +G A+P +FKFFFN W GAL +Q+ W Sbjct: 9 RSLRAGTVLVSQPDQYDHFFHEAVVLVCEHSE-HGSRGVLLNRETPFTMGEMASG-MGCFDEHSVHRGGNGGADTVLMLHARADVAGSKPIGSSGLYLGGLRHAQQLVADGLAEPSEFKFFFNSEVWAPGALEQQLRTLWW 147
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A7S3HFL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFL0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 8.490e-18 Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 231 DLGPLANNRLFRGGEDGGEVAIMIHPHDIDG-ARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVVGLPNDVVLETKRMRDMELWGRIEFAL 572 + G N LF+GGE+G + A+MIH +D+ G +RPLG+ G+FVGG A + V P DFKF FN++ WP GAL ++E G W V +P D++++ LW + AL Sbjct: 7 ETGEFKGNLLFKGGENGQDTAVMIHKYDLGGYSRPLGN-GVFVGGSKQAREKVRTLVTHPRDFKFIFNNIQWPPGALKSEIENGDWDVCQVPVDMLIQQDEEWVDRLWLTLRTAL 120
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A7S0DJ91_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJ91_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 4.040e-15 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 270 GEDGGEVAIMIHP-HDIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVVGLPNDVVLETKRMRDMELWGRIEFALKKKVEQ 590 G DG + +M+H +++GA P+GD+G+++GG +A+ LVE G +P F FFF W GAL +++ + LWK+ + ++L+ K R +LW + L KK + Sbjct: 1 GGDGPDKLLMLHNIPELEGAVPIGDSGVYIGGVTAAVQLVERGDLEPDQFHFFFKRCEWLPGALQKEINQELWKMAKVSPHLLLKQKGRRKRKLWNDLRSRLLKKTNK 108
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A4D9D3B9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3B9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.190e-14 Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 72 LEIGSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPL-ANNRLFRGGEDGGEVAIMIHPHD-IDGARPLGDTGLFVGGFVSALDLVEEG---------------GAKPGDFKFFFNHLAWPAGALAEQVEKGLWKVV 494 L+ G +LVA Y H T K+ +Y+H +R V ++K FT+ E++ + AN+ +F GGE GG++A+++HP+ + G R +G GL+ GG A + +E G FK++FN+++W G L +QV KG W V+ Sbjct: 72 LQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGG-GLYYGGLSGAEAMFKEQEDHHILAPAENKAEHGLDRSQFKWWFNYMSWGPGQLEDQVLKGSWDVM 228
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: B8BQX9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQX9_THAPS) HSP 1 Score: 80.9 bits (198), Expect = 5.560e-14 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 3 Query: 81 GSVLVAGADNYGHMTFKAVALVYEHGEGRPTRAVCVDKGMDFTI--GEMSSGDLGPLANNRLFRGGEDGGEVAIMIHP-HDIDGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGALAEQ---VEKG-LWKVVGLPNDVVLETKRMRDMELWGRIEFALKK 578 G VLV+ Y H KA VY A+ +D D I GEMS +G L+ N L+RGG G + A+M+H + +G++G++ GG VSA++ + G P + KFFFN++ + + + VE G W + +P++ VL++ R +W ++ +++ Sbjct: 27 GVVLVSPVHEYDHFLMKAAVFVY---------AIGLDDNEDMVIRVGEMSPNVMGNLSQNMLYRGGNSGSDTAMMLHSASSLQSGEMIGNSGIYEGGIVSAMEAADAGIISPNNCKFFFNYMQFRELEIDDMFATVEDGDAWVSLEVPSEYVLDSDLDRGA-MWSKLRNKIRE 189
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Match: A0A7S1GIC2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIC2_CYCTE) HSP 1 Score: 79.3 bits (194), Expect = 1.250e-13 Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 3 Query: 174 RAVCVDKGMDFTIGEMSSGDL-GPLANNRLFRGGEDGGEVAIMIHPHDI------------DGARPLGDTGLFVGGFVSALDLVEEGGAKPGDFKFFFNHLAWPAGAL------AEQVEKGLWKVVGLPNDVVLETKRMRDMELWGRIEFALKKKV 584 R V +D FT+GEM+ G + GPLA+N L+RGG GGE A+++H + G +P+G +G++ GG A+D EG ++ GD+KFFFN+ + L ++ + W V +P ++L ++ + W + +KK++ Sbjct: 9 RGVVLDNPTPFTMGEMAPGSIVGPLAHNLLWRGGNMGGESAMLLHCRNELLLEGSSSGSGRSGIKPIGSSGIYEGGLQQAMDSCNEGTSENGDYKFFFNYCEFSRTELDKILSEIDEDDGDAWISVEVPPAIILNDLWNKN-QCWSFLRKIIKKRL 163 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig156.3920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig156.3920.1 >prot_L-elsbetiae_contig156.3920.1 ID=prot_L-elsbetiae_contig156.3920.1|Name=mRNA_L-elsbetiae_contig156.3920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp MTFKAVALVYEHGEGRPTRAVCVDKGMDFTIGEMSSGDLGPLANNRLFRGback to top mRNA from alignment at L-elsbetiae_contig156:1158..4641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig156.3920.1 ID=mRNA_L-elsbetiae_contig156.3920.1|Name=mRNA_L-elsbetiae_contig156.3920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3484bp|location=Sequence derived from alignment at L-elsbetiae_contig156:1158..4641+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig156:1158..4641+ >mRNA_L-elsbetiae_contig156.3920.1 ID=mRNA_L-elsbetiae_contig156.3920.1|Name=mRNA_L-elsbetiae_contig156.3920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig156:1158..4641+ (Laminarionema elsbetiae ELsaHSoW15)back to top |