mRNA_L-elsbetiae_contig1553.3888.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1553.3888.1
Unique NamemRNA_L-elsbetiae_contig1553.3888.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: D8LS68_ECTSI (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS68_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 2.850e-113
Identity = 166/170 (97.65%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRW+ILPQDQR+GIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWP+FISDICE+SKTNEVLCENNMQILKLLSEEV
Sbjct:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWRILPQDQRDGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPSFISDICEASKTNEVLCENNMQILKLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A6V1W3N7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3N7_HETAK)

HSP 1 Score: 217 bits (552), Expect = 5.410e-66
Identity = 105/170 (61.76%), Postives = 132/170 (77.65%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEAAAAKL+D SQP DV LLD++V   FD  +PQ+  AN +LM +KE+  MW +A  ILEQS + +TRF  LQIL   I TRWKILP DQREGIK Y+VGK+I ++  E  + Q+++F++K+N VL+ ILKQEWPHNWP+FISD+  +SK +EVLCENNMQILKLLSEEV
Sbjct:    1 MEAAAAKLLDQSQPFDVNLLDEIVNATFDPRNPQQATANTILMGLKENDQMWLRADAILEQSSNPNTRFFALQILTDTINTRWKILPADQREGIKNYIVGKLISITSDEAQVSQQKVFVSKMNQVLIQILKQEWPHNWPSFISDLVGASKQSEVLCENNMQILKLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A7S3HRC2_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRC2_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.220e-62
Identity = 103/170 (60.59%), Postives = 137/170 (80.59%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            M+AAAA L++FSQP D +LLDQ+V  A D SHPQR  AN  L++MK+ PDMW++A  ILE S++ HT+F GLQ+L  AI T WK++P DQREGI+ YVVGK+I LS +++ ++   +F++K+NLVLV ILKQ+WPHNWPTFISD+  +SKT+E LCENNM++L+LLSEEV
Sbjct:    1 MDAAAAHLLNFSQPFDCSLLDQIVLIAMDGSHPQRAAANEFLVKMKDHPDMWRRADAILEVSKNLHTKFFGLQVLGEAISTHWKVIPADQREGIRGYVVGKVIALSSSDDVMKTNMVFLSKLNLVLVQILKQDWPHNWPTFISDLVGASKTSESLCENNMKVLQLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A7S2VYH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYH7_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.560e-62
Identity = 101/177 (57.06%), Postives = 132/177 (74.58%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQP-------MDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEA + +L+    P        DV+LLD VV+T +D  +PQR++AN  LM ++E PD+W +A  I+E++Q   TRF GLQ+LD A+ TRWKILP DQR+GIK YVVGK+I +S  E+ + +E++FI K+NL LV ILKQEWPHNW +FI D+  SSKT+E+LCENNMQILKLLSEEV
Sbjct:   16 MEAVSQRLISSCSPASSQDVQFDVSLLDNVVSTVYDPRNPQRSNANKALMALQECPDVWTKADAIIEKAQYPQTRFFGLQVLDDAVCTRWKILPTDQRDGIKNYVVGKVITMSSDEQLMSREKVFIQKLNLTLVQILKQEWPHNWSSFIPDLVGSSKTSEILCENNMQILKLLSEEV 192
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A7S2VA01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA01_9STRA)

HSP 1 Score: 200 bits (509), Expect = 4.470e-62
Identity = 97/159 (61.01%), Postives = 124/159 (77.99%), Query Frame = 1 
Query:    7 AAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQ 483
            A  A+L + S   DVA+LDQVV  A+    P R  AN  LM+++E+PD+WQQA +I+E++ + H RF GLQ+LD AI+TRWKILP DQ+EGIK YVVGKII +SQ E +L QE++FI K+NL LV ILK+EWPHNWP+FISD+  SS+T+EVLCENNMQ
Sbjct:   16 ALTARLTNGSD-FDVAVLDQVVAAAYSPMDPNRAAANQFLMQLQEAPDLWQQADSIIEKASNPHARFFGLQVLDDAIRTRWKILPADQKEGIKNYVVGKIINMSQDESTLAQEKVFIGKLNLTLVEILKKEWPHNWPSFISDLVNSSRTSEVLCENNMQ 173
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A482RTY0_9ARCH (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTY0_9ARCH)

HSP 1 Score: 205 bits (521), Expect = 4.020e-61
Identity = 97/170 (57.06%), Postives = 134/170 (78.82%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEAAAA L++FSQP D  LL+Q+V  A D++HPQR+ AN  L+++K+ PDMW++A  ILEQS+   T+F GLQ+L  AI T WK++PQDQREGI++Y+V K+I LS ++E ++  + F++++NLVLV ILKQ+WP   P+FI+DI  SSKT+E LCENNM +L+LLSEEV
Sbjct:    1 MEAAAAHLLNFSQPFDCELLEQLVAIAMDSNHPQRSAANEFLVKIKDHPDMWRRADAILEQSKQATTKFFGLQVLTEAINTHWKVIPQDQREGIRSYIVSKVIALSSSDELIKSNQSFLSRLNLVLVQILKQDWPXXXPSFITDIVASSKTSESLCENNMMVLQLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A7S1YZM0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZM0_TRICV)

HSP 1 Score: 213 bits (541), Expect = 4.540e-61
Identity = 105/171 (61.40%), Postives = 133/171 (77.78%), Query Frame = 1 
Query:    1 MEAAAAKLMDFS-QPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEA A +LMD S +  DV+LLDQVV  A+D   P R  AN  LM ++E+PD+W +A  ILE++Q+  +RF GLQ+LD AI+TRWKI+P +QREGIK YVVGK+I +S  E  + +E++FI K+NL LV ILKQEWPHNWP+FI D+  SSKT+E+LCENNMQILKLLSEEV
Sbjct:   16 MEAVAQRLMDPSAKDFDVSLLDQVVVAAYDPVSPHRGAANKALMTLQENPDLWTKADAILERAQNPQSRFFGLQVLDDAIRTRWKIMPPEQREGIKNYVVGKVISMSSDEAVMTREKVFIGKLNLTLVQILKQEWPHNWPSFIPDLVGSSKTSEILCENNMQILKLLSEEV 186
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A8K1CLE8_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLE8_PYTOL)

HSP 1 Score: 214 bits (545), Expect = 2.150e-60
Identity = 104/170 (61.18%), Postives = 132/170 (77.65%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEA   KL+DF+QP DVA LDQVV    D   P +  AN +++ ++E  D W +A  ILE+S S  T++ GLQIL+ AI+ RWK+LP++QREGIK Y+VGK++QLS  E +LR+ER+FINK++LVLV +LK EWPHNWPTFISDI  SSKT+E+LCENNM ILKLLSEEV
Sbjct:    1 MEAIGQKLLDFTQPFDVAALDQVVACMNDPKSPHQRIANQIMVALQEHQDSWTRASDILEKSTSPQTKYFGLQILEDAIRYRWKVLPKEQREGIKGYIVGKLLQLSSDEATLRRERVFINKMDLVLVQVLKHEWPHNWPTFISDIVSSSKTSEILCENNMTILKLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.190e-60
Identity = 103/170 (60.59%), Postives = 132/170 (77.65%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            MEAAAAKLMD SQP D+ALLDQVVT  +D  +PQ+  AN LLM++K+  +MW ++  ILE + S  T+F GLQILD  +QT+WK LPQ QREGI+ +V G I+ LSQ++E + Q R+ + K++ VLV +LKQEWPHNWP+F+ DI   SKT+EV+CENNMQILKLLSEEV
Sbjct:    1 MEAAAAKLMDMSQPFDLALLDQVVTATYDPHNPQQQQANRLLMQLKDHKEMWTRSKDILEGTASPQTKFFGLQILDDVVQTQWKALPQVQREGIRNFVSGMIVSLSQSDEIMAQNRVLLGKLDRVLVGVLKQEWPHNWPSFVPDIVALSKTSEVICENNMQILKLLSEEV 170
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BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Match: A0A7S3Q1F7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1F7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.550e-60
Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 1 
Query:    1 MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPDMWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVGKIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSKTNEVLCENNMQILKLLSEEV 510
            ME A  +L D SQ  D+ALLD VV T +D    Q+  AN  LM ++E+PD+W +A  ILE++ +  TRF GLQILD AI+TRWKILP +QR+GIK YVVGK+I +S  E++LR+E++FI K+NL LV ILKQEWPHNW +FI D+  SSKT+EVLCENNMQILKLLSEEV
Sbjct:    7 MEGALQRLQDASQEFDIALLDNVVATVYDPRSTQQIAANKALMTLQENPDIWTKADAILEKATNPQTRFFGLQILDDAIRTRWKILPAEQRDGIKNYVVGKVISMSSDEQTLRREKVFIQKLNLTLVQILKQEWPHNWSSFIPDLVGSSKTSEVLCENNMQILKLLSEEV 176
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1553.3888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS68_ECTSI2.850e-11397.65Importin N-terminal domain-containing protein (Fra... [more]
A0A6V1W3N7_HETAK5.410e-6661.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HRC2_9STRA1.220e-6260.59Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S2VYH7_9STRA1.560e-6257.06Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2VA01_9STRA4.470e-6261.01Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A482RTY0_9ARCH4.020e-6157.06Importin N-terminal domain-containing protein (Fra... [more]
A0A7S1YZM0_TRICV4.540e-6161.40Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A8K1CLE8_PYTOL2.150e-6061.18Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A835YZ33_9STRA2.190e-6060.59Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S3Q1F7_9STRA4.550e-6061.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1553contigL-elsbetiae_contig1553:142..7729 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.6
Seed ortholog evalue2.8e-88
Seed eggNOG ortholog2880.D8LS68
Preferred nameXPO1
KEGG koko:K03939,ko:K14290
KEGG TC1.I.1,3.D.1.6
KEGG Pathwayko00190,ko01100,ko03008,ko03013,ko04013,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,ko05164,ko05166,ko05169,map00190,map01100,map03008,map03013,map04013,map04714,map04723,map04932,map05010,map05012,map05016,map05164,map05166,map05169
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000054,GO:0000055,GO:0000056,GO:0000122,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0005049,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0005911,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0007275,GO:0008104,GO:0008150,GO:0008565,GO:0009266,GO:0009408,GO:0009506,GO:0009553,GO:0009555,GO:0009628,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009889,GO:0009890,GO:0009892,GO:0009932,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016049,GO:0019219,GO:0019222,GO:0019904,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033157,GO:0033750,GO:0034613,GO:0040007,GO:0042221,GO:0042254,GO:0042493,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045184,GO:0045892,GO:0045934,GO:0046822,GO:0046825,GO:0046907,GO:0048229,GO:0048468,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0055044,GO:0060255,GO:0060341,GO:0060560,GO:0065007,GO:0070201,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0098687,GO:0140104,GO:0140142,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.nuclear export signal receptor activity
EggNOG OGsCOG5101@1,KOG2020@2759
COG Functional cat.UY
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03016,ko03019,ko03036
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-12_004630.2
Exons8
Model size675
Cds size675
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1553.3888.1prot_L-elsbetiae_contig1553.3888.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1553 142..7729 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815634.9917805-CDS-L-elsbetiae_contig1553:141..2961622815634.9917805-CDS-L-elsbetiae_contig1553:141..296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 142..296 -
1691683004.8071249-CDS-L-elsbetiae_contig1553:141..2961691683004.8071249-CDS-L-elsbetiae_contig1553:141..296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 142..296 -
1622815635.0048354-CDS-L-elsbetiae_contig1553:580..5911622815635.0048354-CDS-L-elsbetiae_contig1553:580..591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 581..591 -
1691683004.8189209-CDS-L-elsbetiae_contig1553:580..5911691683004.8189209-CDS-L-elsbetiae_contig1553:580..591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 581..591 -
1622815635.0159733-CDS-L-elsbetiae_contig1553:851..9101622815635.0159733-CDS-L-elsbetiae_contig1553:851..910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 852..910 -
1691683004.8294106-CDS-L-elsbetiae_contig1553:851..9101691683004.8294106-CDS-L-elsbetiae_contig1553:851..910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 852..910 -
1622815635.0312073-CDS-L-elsbetiae_contig1553:1757..18351622815635.0312073-CDS-L-elsbetiae_contig1553:1757..1835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 1758..1835 -
1691683004.843226-CDS-L-elsbetiae_contig1553:1757..18351691683004.843226-CDS-L-elsbetiae_contig1553:1757..1835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 1758..1835 -
1622815635.0442708-CDS-L-elsbetiae_contig1553:2874..29341622815635.0442708-CDS-L-elsbetiae_contig1553:2874..2934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 2875..2934 -
1691683004.8548224-CDS-L-elsbetiae_contig1553:2874..29341691683004.8548224-CDS-L-elsbetiae_contig1553:2874..2934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 2875..2934 -
1622815635.0552042-CDS-L-elsbetiae_contig1553:3330..34231622815635.0552042-CDS-L-elsbetiae_contig1553:3330..3423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 3331..3423 -
1691683004.8688958-CDS-L-elsbetiae_contig1553:3330..34231691683004.8688958-CDS-L-elsbetiae_contig1553:3330..3423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 3331..3423 -
1622815635.0673587-CDS-L-elsbetiae_contig1553:4170..42871622815635.0673587-CDS-L-elsbetiae_contig1553:4170..4287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 4171..4287 -
1691683004.8783247-CDS-L-elsbetiae_contig1553:4170..42871691683004.8783247-CDS-L-elsbetiae_contig1553:4170..4287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 4171..4287 -
1622815635.0803561-CDS-L-elsbetiae_contig1553:7627..77291622815635.0803561-CDS-L-elsbetiae_contig1553:7627..7729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 7628..7729 -
1691683004.8870392-CDS-L-elsbetiae_contig1553:7627..77291691683004.8870392-CDS-L-elsbetiae_contig1553:7627..7729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1553 7628..7729 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1553.3888.1

>prot_L-elsbetiae_contig1553.3888.1 ID=prot_L-elsbetiae_contig1553.3888.1|Name=mRNA_L-elsbetiae_contig1553.3888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MEAAAAKLMDFSQPMDVALLDQVVTTAFDASHPQRNDANILLMRMKESPD
MWQQAGTILEQSQSQHTRFIGLQILDGAIQTRWKILPQDQREGIKTYVVG
KIIQLSQTEESLRQERIFINKINLVLVAILKQEWPHNWPTFISDICESSK
TNEVLCENNMQILKLLSEEVEGWRIRQNLRAVRVHPGPQPEAVSAERHPA
DAAAFPHVDPAGVYFRAADDRVSLV
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mRNA from alignment at L-elsbetiae_contig1553:142..7729-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1553.3888.1 ID=mRNA_L-elsbetiae_contig1553.3888.1|Name=mRNA_L-elsbetiae_contig1553.3888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7588bp|location=Sequence derived from alignment at L-elsbetiae_contig1553:142..7729- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGCGGCGGCGGCGAAGCTGATGGATTTCTCTCAGCCGATGGACGT
GGCTCTGCTAGACCAGGTGGTGACGACAGCTTTCGATGCCAGCCACCCGC
AGGTGAACGCTCAGCGCCTGGGGGGGGGGGGGGGGGGCGGTGTTGTGCGG
TGCAAGCGGGGAGAGCGGGGGGGAATCCCGGGAACGAATTCAATTACAAA
ACAANNNNNNNNNNGTTGGACGTGGCTCGGCTAGCCAGGGGGGTGCCGAC
GGTTTTCGGGCCCGGCCCCCCGAGGGTGACGGCTCGGGGCGGGGGGGGGG
GGGGGGGTGCTGTGTTGTGCTGTGCAAGCGGAGAGAGCGAGGGAGAATCC
CGGAAACGAATTCAATTACACAACAAGTGCCCTAAATCTAAATACTCCGG
TACTAGACTAGATATTGTTAGAATAGACATACAGGGAAACAATCGACGCC
AACATACCATTTTCTCTCTGTCAGTCTGTTGGTGTGTCACGGCATTTCAG
CAGCCTGCCTGATCCCTGTTGTCGGACCTCAAAAACATGGCATCGACCGG
GAGAGGTGAGGTCTAACCGAACCACACCACGACGTGAAAAGGGCCAGCGG
GTGGTGTGTGAAAGGAGTGAGTGCAATTGTTGCAATGTGTGGAGTTATTT
CTTCTTTTAAATATTGTAAAAAAAAGTTGAGATAAATGGCCGAAGTATTC
GTCTCCTCCAGAGAGTAAACAAAACAGCCGAGGTTAATAAATAGTCATGT
AGTCAAGTATTGACCCGCGGAGGACGACTCACTACTTGCAGTAGCCCCTG
TCTGCTTGCTGTGCGAAGACAGAACGGGCATATTTGCGCTGCACTTGACA
GATTGTATTGTAGTGACACGCCTTTTCGTTCGACTGAACTCCAGAGAGAC
AGAGAGACACTAGCGAGAGGGCGAGGTTATTTAACCCCTCGGGGACTAGG
CTCGTCACAGGCCGCAAGGCGAACAGTCCAGAAAACGCGGCGGGACTATG
CAAAGAAAACCGGGTCTGCAGCGCAGATACGCAGGTTCTCTGTTCTCTGC
TCTGAAAATGAAAAAAAAAGAGACTTCTGGTTGCAGAAGTCAACCCAGCA
GCAAAACACGCACCGCGGCCGTGTCGCCGCCCGATAACACTCTGGGGACG
TCTGATGGCACACTAGCAAGCTTCATCGGCCCTCAAAACGTCACTGCTAG
TGTTCGCCCGAAGCCTTATTCCTTTGTAGCGCTGTCCCGGGCTCTGAACT
CTTCTGAAAGTACTTTAAATTCAGTATATACCATTTAATCACAAAACATG
ATCACTAAATTGGCACCGAAGTGCCCTACGGCAATAGCGTACTTCTGTAC
TTCTCGGGGGGCCGCCGGATAGAGTCCTGCCTCTAGCGCTCGGTTACTTT
GCAATACTATCCAACGGCAACAGCAAGCAGATCGATCTACACCGGTTGGT
GTATGTAGACGGAAATCCAAGAGGTGTTTGGCGATGTGCTGTTGTGGGTA
TGTACTTGTGCTGGTGGTGTGGGTGTATTTGTGTGTCTTGGCATGCTGCG
TCATGTGATGTGTGGGATGAGAGGGAGAGAGCAAAACCGATTTCGTAAAT
AACCAATCACCCCCAACTCCCAAATGCAACAGCCAAGCAGCAACCGGGGC
GGCCGCTGTAGCAAGCTGCCGGAGACGAAACATAGCGTTACAACCCTGCC
GCTGCTGTGCCACCCCATCTGGGTGGCCATGTGACCATATCGGTTGTTCA
TGTTGTCGTCCCGATGTGCCAACCAGCCCAGGTCCGCACAAAACCGGGCG
TCTCAATGATCATTTTTTGTGATCACCAAAACCCGCTTGAAGTCCCAGAA
GGGTTACCAAAGAGTTATCTGTGTAGTTGCCCAAAACCGGAATGGGACGC
GAGAGAGGAGGGTTGAGGGTTGGCCGTAACTGCTACTGTGCCTTAAGTAT
AAGCACACTCCCGGCAACACCGAACTCCCTGGCAAACGCACACACGCGGA
GATTTTGCTCTGTTTGCCCTGAGGTGCGTCGGAGCTCTGATGTGTCGTTG
GTAAAATCGTGAAATCCGAACTCGTGTGCATACAATTGATATGCTCTTCT
CTGTGTTTCGCCTCTGTGTCTTTGCCTGGTGCTGATGGGTATGTACGTAG
GAGTAGGTGGCAAATGCCCATGTCGCACGGCCATCCCTTGTCGGGGCGCC
ACCAAACCGGCGTGACGACCAGTGCCCGATTTCCCTCTCTCTCAGAAGCC
GATATATCGTCAATCGTTGCTCTAACTGCTGTACATATTAATGTACATGT
TGTACACACCTGGTCAAAAGTGCGGTCATATTTGACGGTGGTTCATCCAA
CGAGACCACCTGCAATCGCGCTTGGAAGAGGCCGATGCTTGGAGCCTTTT
TTTCCCCTCGGGATTCCAGGGCAAGAAAAAGTTGCAGCTTCGTCGCTCGC
GGCTCCATACTGCCCAACCCAACCGCATGGCGCCAAATGGAATTCCAGGA
ACAAAGACTGCTTGTGATGAAGTAGGCTATCTACCTTCACAGTAAATACT
TGCATGGGGAGTTAACCCTGTATCGTCAAGCACAGCAAGCCTGGAGCTTG
TTGGCTACAACGGTAACTGTATCCAAGGGAGCGGGATACTTGGTCAACGC
ATGTTTTATGTATGCATGTGGCATGTATCACATACCGGGCCCAGGGTTAG
TTTGTCGTGCAAATCAACACGCGTCTCGCGGGGCACGTGTGTGTGTGTGT
CGTGTGTGTCGTGTCTCGCCGCTTTTTCAGAGGAGCAGGCATTGCATTGC
GATACATACATACCTCACCCACCGTTTCTGCGATGCCCCACACGCGCCGT
TTTTTCCCGTGGGTGGTGTATCCACGCATGTTGATTGATGTGTAGACGTT
TCAAGGTTTTCGCCGGCTTTTGCCGCCACGCTAAGAGTGAGCGAGTCCCA
AGATAGATATGTGTGGTGCGTTGACTACATTATCAAAAAACTATGTACGG
ATTTGGCATCATCGCTCGTATCAATGAAGAGGGAGATTTGCCGGCCGCTT
CGGTGCGCAGGACTGAAAGCCCGAATTGACGTGAGAACAGACAGGGGTAG
GAGAAGCAGATATCCACGCGGACACACAGGACAACGAGGAGAACTAGGAC
GCAGACGGAGGAAGTAGTAATTGGCTGTCACGAGCGGTACTCCCCTTTTC
CCTCAAGCTCAAACACGCACAAGTTTTGATGGAAACCCCATGTATGTATC
CACCCACACCGCCGAGCCCCCCATGCCCCCCTGCCTTCCGTTGATTACTC
TCGCCCCGCCTAGCGTTCCTCGTGTGTGCCAGCGAAACTTGCCCGCAATC
GACTCCAATCCAATTCCAGACTATTCCGATGCAATGCAATGCAATGCCAT
CCAAAACGCCACTTTTGAACCGAATCAATCAATCGAAAACAGCGCAACGA
CGCCAACATTCTGCTCATGAGAATGAAGGAGAGCCCCGACATGTGGCAGC
AGGCCGGAACTATCCTGGAACAGTCCCAGAGCCAGCACACGCGCTTCATC
GGTCTGCAGGTACACGATACTGACTGTATGTACAGGAGTAGTAGTATAGG
TGTGGCGCGACAGTGGTGTACACCCGGCCGCCTGAGGTAGGATGGTGCGA
AACACGGAGCCCCCAAACAGCAGAATCATCAACGCGACACCGTGCAATTG
GTTGGAGTGGATGGTTTTTGTGTCGCTGTGACGAGTGTTGTTGCAATGGT
GCGGGTTGCTTTCACGATTGGCGGGAAAATAGCGGTAATTATTTTTGTAG
CTATTTAGCGGCGCGCGATATTTGTTTGGTATCATTTGTATTCCGCCGCT
TCTGTTCGCGCGTATCGCGAACTTTTTTCTTACCCACGCTGCACGGAGTT
GATCCTCGAGTATCGCTCGCTAGAACGCGCTTGTCGGCGTGTTTCGGAGG
CAGTGGCGGTTCGTCGTCGTGCCGATCGGTACACGCGCGCGTATACACAC
AAGTTATTTCGTACAGTTGCATGAGGGGATCGCTTGTGCCCTACACTACT
GCTGTTTTGCGGCCACAGACGGACCCCCACAGACGCTTTGGAGTGCAGAG
CGAGCGAATGTGAGCAACGACAAGGAACAGCCCGCCTCGCTGCCGGACAA
GCTTGTTAACGTTTTCCTCTTTTTTCTCTTGTATTTTCGGCGTGTGCGCT
TGCCTCTCTCTCTCTCTTTCTCTCCCCCCCCCCTCTCTCTCTATTTCTCT
CTCGGGTAATCTTGTGTGTGACGTGGGGGCACGGGGGCGGGCGGGGGCGG
GCGCAGATCTTGGATGGGGCGATCCAGACGCGATGGAAGATTTTGCCACA
GGACCAGCGTGAAGGTATCAAGACCTACGTCGTGGGCAAGATCATCCAGG
TCCGTCTCTTCTTTGCAGTCTCCGTAGATGTAGGCGTCTAAACAGGAAGT
GTGTCTCAGGTCTCAAAACTTTCAACAGCTGGCCTATGCTGGTTTGCTGT
TGTTGACTAGTCTTGGAGTCTACATTCATACTTGTCCCCCTTTTTCTTCC
GTCGTGTATCTAACTTGCTATTTTCGCTGAGTGTTCCTAGTGTTCGTTGC
CGCAGTATATGTGATGGCCACACCGACAAGCAGCTTATCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTATGACTTCTGCGGGCCG
GGGGGGCGGGGGGTGGCTGTGGTGACGGTTGTCCGGATATTGATGCTCGG
ATATATGCCGGGATGGTCTCGGCTTGGGGTTGGGGCGATTTGCAGCTCTC
TCAGACGGAAGAGTCCTTGCGGCAAGAGCGGATATTCATCAACAAAATCA
ACCTGGTGAGCGGTAGGGTGACTGGCAGCTGTTACGGGGGGTAGGGAGAG
AATCAAGAGTCGGTGGGGGGGGAGGGAGGATTTGGTACGGAGGTTGTAAG
TTATAAGGTCATTTGGTAGGTATTTTCAAGATAGCTTGGGCATCAAAGCA
AAGCGGTGTGTTTCTCGATCGATTCAAATCGGATCAAAAGTTTTTTGAGT
CAGGTGTTATCAGCGGGCAGTTTTTTACCAAAATAGCCCACATACATACC
TATATTACCTTGCTTTTACCGATGGTAGCGGAGCATGTTGGCGGCGGCTC
TTTTGCGCCAGGGGCACGTTAGTCGTGGTAAGTAATGGCGGGCTGGATGC
TGCGCTGGATGGTGATATAACGCGCCCCCGTGTTGCGCCTTGTATATTCG
TATTCATATTTTTACACGGGAGGCAAAGCTATTGATCGGCACTAGTGCGT
TCTGCAGGGTGAGATGAACACGTGCGTCGGGCGGCAACGACGGCAGCGGC
GACGCCCGTACACGGAGTGTACATAGAGCTGTGCTGTCAGCCTGGTTGTC
TCGTAGTACACGCGCCAGACTAGGTCTGTCTGTTGTCGTGCGGGATGATT
AAAATGGTGGCGGTGGCGGTGGCGATGGCGGTGGTCTGTAGGGATATCCC
GTTGCTGCACCCCGCCTCCCGCCTCGGCTGGCGGGCAGGCGTCCTCGCGA
CACCCCTGCCGTCCTTCCGTCCGCCCCGTCTCATGAGGGATTTGCCCTAG
GCTATCGCATGATGTTGTTGGGTACCGTAGGTGACACAAGATACCACACC
CCCTGGATCGAACTTTAGAGCTCCATTACTCCGCAACGAAGGTGCCAGCA
CCAAACGACGCATTTTCGGACAGCCCTTGACTAGATCTTTCCAACGCCAC
CCTTTTTGGCACTGGCGCTCTTCTGGCGGGGGAGGAATCGAGCTTTGAAA
ATCTGTCCAGGGGGTGTGGTGTCTTGTGTCACCTACGGTACATGAAGTTT
GATCTTGATGCCTGTACGCGCGACCCGCCGACCGATGCCGTCAGGTACTG
GTGGCGATCTTGAAGCAGGAGTGGCCGCACAACTGGCCTACTTTCATCTC
GGACATCTGCGAATCAAGCAAGGTGTGTTAAAAAGTCTGGTGTTCGTGTG
AACAGGTGCTGTGTTCAACCGTGTTTGACGGAAGAGGAAGGAGTTATCTC
CCCCTCCGGAAGGGCCCAGCGTCCCCATGTGGCTTTATTTGTGGGCTTAT
GTGGGAAGTGACCTTGAGAGGGTTAGGGTTGGGTCTCTCGGAAGGAAGTG
CGCGTGCGCTTGGGCGCAGAAGGACGAACGGGGGGCAGGTTGAGAGGGAG
AGGGAGAGAGACGGCGTTGTTTTGAAGCAAGCACAGCAGCCCAGGAAGGT
GCTTTTGGTTTGGGCGTCTCTTTCCCTCTCACAGGACACTCAGAAGTTGA
GTGTAAGGTAGGGTCGTCGTCGTCGTCGTCCTAAGTTGCCAATGTCGCAC
CACTTGGAAGGGTGTCCGCCTTGAGCTAGCCCCCGCCTCCCTAGAACTGC
ATTTTTTCCCCGAGTCGTAGCGCGTCGAGTTTCGAGAAAGACGAGAGAAG
GCCGATATACCCCTTTATGAACGGGCATGTGTTTACACTTTCAAGAAGCC
AGTCACCCCTCTCTGCAAGCTGTCTGTTGCGACCTGAAAAGTGTTCTCCG
CTCTTACCAATACGAGACGGTTGTGCTGTTCTTCTGTCCTGTGCTGCGGA
TGAAGGCGTGAAGACTCGTCATTCTGCTTCACGTGTTGTTTTTCTGTCCG
TGTGAACCCCATTCGCTCTCGTTTTCACGACGGTTTTGTTGTGCTGTGCT
ATGCTATGCTGCTGTTGTTGCTTTTCTTTTGTTTTTTTCAAGACAAATGA
GGTGCTCTGTGAGAATAACATGTGCTGTGCTGCTGCTGTTGCTTCTCTAT
TTCCTTTTTTTTTTCCAAGACAAATGAGGTGCTCTGCGAGAATAACATGC
AGATCCTCAAGCTGCTGAGCGAAGAGGTGTTTGACTTCAGCAAAGACCAG
ATGACCACCGCTAAGATCAAGACCATGAAGGAGAGCCTCAACGACGTGAG
CGAAACCAAATCGTCGGGAGAGGGAGGGGCAGAATACACTTCCATTCGTC
GCTTGCCTTCTAAACCGTTTGGGCTGTTTGGTTTAATGCTTGCAGCATCA
GGCCAACACTTGCGCAATTTTAGCCAAGAAATACACAGTCTCCCCGCTTG
CTTAGCTTGGGAACTACTGCTGTGGGCACATCGAGAAGAGAAGGGTGGAG
TATTTCCACAAAAAAGAATGGTTATTGTAACTACACTCATAGGACCCCGG
CCGGTGGCAGGCACTGGCACGCGGTGCGATGTGATGCAACACCGTCGTGG
TCCCTGCTGTCTCTGTTGCCGCTGCCGCTGCCGTCTCGAGTTAGTGGTCG
TCGTCGTGGTCGCTTTTTTCCCGTGTTCTCGTAGTTGCATGTCGTTTGCT
GGTGCCCCCCAGATCCCAACCCTTGCCGTATGTTTAATATCTATCTCCGC
TCTCCTGCCCCTGCCCCACCCCTCCCTCCCCAGGAATTCGCCAAAATTTA
CGAGCTGTGCGAGTTCATCCTGGACCGCAGCCAGAAGCCGTCTCTGCTGA
ACGGCACCCTGCAGACGCTGCAGCGTTTCCTCACGTGGATCCCGCTGGGG
TATATTTTCGAGCGGCAGATGATCGAGTGAGTCTCGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1553:142..7729-

>mRNA_L-elsbetiae_contig1553.3888.1 ID=mRNA_L-elsbetiae_contig1553.3888.1|Name=mRNA_L-elsbetiae_contig1553.3888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig1553:142..7729- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGCGGCGGCGGCGAAGCTGATGGATTTCTCTCAGCCGATGGACGT
GGCTCTGCTAGACCAGGTGGTGACGACAGCTTTCGATGCCAGCCACCCGC
AGATGGAGGCGGCGGCGGCGAAGCTGATGGATTTCTCTCAGCCGATGGAC
GTGGCTCTGCTAGACCAGGTGGTGACGACAGCTTTCGATGCCAGCCACCC
GCAGCGCAACGACGCCAACATTCTGCTCATGAGAATGAAGGAGAGCCCCG
ACATGTGGCAGCAGGCCGGAACTATCCTGGAACAGTCCCAGAGCCAGCAC
ACGCGCTTCATCGGTCTGCAGCGCAACGACGCCAACATTCTGCTCATGAG
AATGAAGGAGAGCCCCGACATGTGGCAGCAGGCCGGAACTATCCTGGAAC
AGTCCCAGAGCCAGCACACGCGCTTCATCGGTCTGCAGATCTTGGATGGG
GCGATCCAGACGCGATGGAAGATTTTGCCACAGGACCAGCGTGAAGGTAT
CAAGACCTACGTCGTGGGCAAGATCATCCAGATCTTGGATGGGGCGATCC
AGACGCGATGGAAGATTTTGCCACAGGACCAGCGTGAAGGTATCAAGACC
TACGTCGTGGGCAAGATCATCCAGCTCTCTCAGACGGAAGAGTCCTTGCG
GCAAGAGCGGATATTCATCAACAAAATCAACCTGCTCTCTCAGACGGAAG
AGTCCTTGCGGCAAGAGCGGATATTCATCAACAAAATCAACCTGGTACTG
GTGGCGATCTTGAAGCAGGAGTGGCCGCACAACTGGCCTACTTTCATCTC
GGACATCTGCGAATCAAGCAAGGTACTGGTGGCGATCTTGAAGCAGGAGT
GGCCGCACAACTGGCCTACTTTCATCTCGGACATCTGCGAATCAAGCAAG
ACAAATGAGGTGCTCTGCGAGAATAACATGCAGATCCTCAAGCTGCTGAG
CGAAGAGGTACAAATGAGGTGCTCTGCGAGAATAACATGCAGATCCTCAA
GCTGCTGAGCGAAGAGGTAGAAGGGTGGAAGAAGGGTGGAGAATTCGCCA
AAATTTACGAGCTGTGCGAGTTCATCCTGGACCGCAGCCAGAAGCCGTCT
CTGCTGAACGGCACCCTGCAGACGCTGCAGCGTTTCCTCACGTGGATCCC
GCTGGGGTATATTTTCGAGCGGCAGATGATCGAGTGAGTCTCGTCGAATT
CGCCAAAATTTACGAGCTGTGCGAGTTCATCCTGGACCGCAGCCAGAAGC
CGTCTCTGCTGAACGGCACCCTGCAGACGCTGCAGCGTTTCCTCACGTGG
ATCCCGCTGGGGTATATTTTCGAGCGGCAGATGATCGAGTGAGTCTCGTC
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