mRNA_L-elsbetiae_contig15408.3822.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 141 bits (355), Expect = 8.760e-37 Identity = 78/137 (56.93%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 7 DAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVLD 417 DAF + LSQACEGGEKRWYTST ELQ SL+ CRACRS PTLHVRV +P SLW Q P N S+V + SRVP VRAL LTW SME L QR I+ ++ E L++ L SL ++VWP GL +LVLD Sbjct: 11 DAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALP-NTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVG-PLCAASLGSVVWPLGLTQLVLD 145
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 147 bits (371), Expect = 3.370e-35 Identity = 77/138 (55.80%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVL 414 CLDAF++ LSQACEGGEKRWY STLELQ TSL+ CRACR+ LHV V D +PRSLW ++ AQT P N + + SRVP VRAL LTW LSMEAL ++ I+ + E L+L S +VWP+GL +LVL Sbjct: 11 CLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRP-NTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL 147
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 121 bits (303), Expect = 2.640e-28 Identity = 68/141 (48.23%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 4 LDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPG-----SLRAMVWPQGLKKLV 411 LD IV L+QAC+G EKRWY STLELQ SLE C ACRS LHV V + +P +LW ++ ++T P + EV +RVPAV+ALC TW L M+ LPQR A+ E ++ R L G S+ ++VWP+ LK+LV Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTP-SQRSPEVCTSNRVPAVQALCWTWALPMDRLPQR------AAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 122 bits (306), Expect = 3.930e-27 Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVLD 417 CLDAF+V LSQ EGGEKRWYTSTL+LQ SLEFC ACRS P LHV V +P +LW +A P A S +RVPAV+A+ LTW E+ + + + LE LQL + SL +L ++VWPQGL++LV+D Sbjct: 9 CLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQAN---PTAGTS-----TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQL-QVSLCTANLDSVVWPQGLQRLVMD 138
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.410e-27 Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQG-LKKLVLD--VPAETS 435 CL AFIV L+Q C G EKRWY STLELQ SLEFC ACR +PTLHVRV +PRSLW K+ + E + +RVPAV+A LTW L ME L Q ++ + ++ ++S S + SL +M W Q LK+LV D +PA T+ Sbjct: 17 CLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSR-EACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNS-STASLGSMFWLQMMLKRLVFDSDMPASTA 162
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.370e-25 Identity = 67/139 (48.20%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVLD 417 CLDAF+V L+QAC+G EKRWY STLELQ SLE C ACR + TLHVRV +P SLW + T N +V + SRVP V+A LTW L M L QR + + + + S A SL + VWPQ LK++V + Sbjct: 9 CLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTT-NNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSA-ASLESAVWPQRLKRMVFE 145
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.350e-24 Identity = 73/176 (41.48%), Postives = 92/176 (52.27%), Query Frame = 1 Query: 7 DAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAH--------------------------------KSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVLDVPAETSV 438 DA I+ +SQA EG KRWYTSTLEL+ SLE CRACR +PT+HVRV +P SLW T AH K+ +S SRVP +AL LTW L E L Q ++ + LEFLQL R SL+P L ++ WPQ LK+L L+ E ++ Sbjct: 11 DALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPT---RAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARIS--SRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQL-RESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 1.160e-20 Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHK 213 CLDAF+V L+Q C+G EKRWY STLELQ SLEFC ACR +PTLHVRV +PRSLW +T P AHK Sbjct: 41 CLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLW---SPRTTPITAHK 108
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 8.860e-20 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAVRALCLTWELSMEALPQRFTIQRFASLEFLQLSRRSLAPGSLRAMVWPQGLKKLVLDV 420 C+DAFIV L++ C+GGE+RWY STLELQ SLEFC ACR +PT H S ++ R VS SR P VRA LTW LSM+ L Q ++ ++ + S A +L +M+W Q LK+LVL++ Sbjct: 19 CVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH------STSTVGRL--------------VSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSA-ANLASMLWLQRLKRLVLEL 137
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.940e-19 Identity = 49/83 (59.04%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 1 CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDLSPRSLWRAQKAQTGPPNAHKSEVSLPSRVPAV 249 C DAF+V LSQACEGG KR YTSTLEL SL+ CRA RS TLHVRV +PRS W K Q P S++ L SRVP V Sbjct: 22 CFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEG-SSKIRLSSRVPVV 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15408.3822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15408.3822.1 >prot_L-elsbetiae_contig15408.3822.1 ID=prot_L-elsbetiae_contig15408.3822.1|Name=mRNA_L-elsbetiae_contig15408.3822.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp CLDAFIVVLSQACEGGEKRWYTSTLELQRTSLEFCRACRSIPTLHVRVGDback to top mRNA from alignment at L-elsbetiae_contig15408:2279..3547- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15408.3822.1 ID=mRNA_L-elsbetiae_contig15408.3822.1|Name=mRNA_L-elsbetiae_contig15408.3822.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1269bp|location=Sequence derived from alignment at L-elsbetiae_contig15408:2279..3547- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15408:2279..3547- >mRNA_L-elsbetiae_contig15408.3822.1 ID=mRNA_L-elsbetiae_contig15408.3822.1|Name=mRNA_L-elsbetiae_contig15408.3822.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig15408:2279..3547- (Laminarionema elsbetiae ELsaHSoW15)back to top |