mRNA_L-elsbetiae_contig15406.3821.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15406.3821.1
Unique NamemRNA_L-elsbetiae_contig15406.3821.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A6H5J6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6G6_9PHAE)

HSP 1 Score: 452 bits (1164), Expect = 7.160e-152
Identity = 214/235 (91.06%), Postives = 225/235 (95.74%), Query Frame = 1
Query:    1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705
             GNELFEFNATS DNLHEEG PLLRGHAA ELWGL+C+P+APEFCTVGEDKQLRIWDIYSKRP+R HEVEMPSRAV+YSPDGSKIAVGFG P+RESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMG+ADGK+YVY+T E+YVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQA+ELFSHEADTGMVIPAASRLKNVQW TQTVLFGWASQG WP ELDGTEV
Sbjct:  268 AGNELFEFNATSGDNLHEEGKPLLRGHAANELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVYNTDEKYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAYELFSHEADTGMVIPAASRLKNVQWDTQTVLFGWASQGAWPPELDGTEV 502          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 4.530e-144
Identity = 215/235 (91.49%), Postives = 226/235 (96.17%), Query Frame = 1
Query:    1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705
             GNELFEFNATS DNLHEEG PLLRGHAA ELWGL+C+P+APEFCTVGEDKQLRIWDIYSKRP+R HEVEMPSRAV+YSPDGSKIAVGFG P+RESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMG+ADGK+YVY+T E+YVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQA+ELFSHEADTGMVIPAASRLKNVQW TQTVLFGWASQGVWP ELDGTEV
Sbjct: 1083 AGNELFEFNATSGDNLHEEGKPLLRGHAAHELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVYNTDEKYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAYELFSHEADTGMVIPAASRLKNVQWDTQTVLFGWASQGVWPPELDGTEV 1317          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: F0YLX5_AURAN (HELP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLX5_AURAN)

HSP 1 Score: 226 bits (576), Expect = 1.970e-66
Identity = 107/231 (46.32%), Postives = 157/231 (67.97%), Query Frame = 1
Query:    1 VGNELFEFNATSCDNLHEEGSPLLR---GHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPA 684
            VG EL+E +     NLH EG  L     GH   ELW LAC+PT P+FC+ G+DK LR+W ++ KR +R +++EM SRA +YSPDG ++AVGFG PV++++KQFDGK++++  DDF ++H ARDSQK IT++K+APSG+ LA+GS D +IYVY+T  R    A    HNS +  +D+S D +YV+S  + +E   + A  G  +   S+LK+V++   + ++GW +QG W A
Sbjct:  334 VGAELWEVDTAEGKNLHPEGPVLFGHFGGHYGGELWALACHPTLPQFCSAGDDKMLRVWSLFEKRMVRCNQLEMMSRACAYSPDGKQVAVGFGAPVKQTAKQFDGKFVIMNADDFAIVHEARDSQKWITELKYAPSGELLAVGSFDNRIYVYTTHMR----AKCLKHNSFVTHLDWSADSKYVQSDARDYEHLYYGALDGAHVRLPSQLKDVEFAGWSCIYGWPTQGAWAA 560          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S3JVR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVR1_9STRA)

HSP 1 Score: 230 bits (587), Expect = 8.910e-66
Identity = 118/249 (47.39%), Postives = 163/249 (65.46%), Query Frame = 1
Query:    1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTP-----VRESS-----KQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYV-LAAMLTTHNSPIVAIDFSTDG---RYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705
            + +E++EF+A+   N+      +L GH   ELWGL+ +PT P+F T G+D  LRIW I+ KR +R H +EM +RA +YSPDG ++A+G+G       ++E+S     KQF+GK  +L  DDF VLH  RDS K IT+IK++PSG+ LA+GSAD +IY+Y      + L  M+T H+S I  +DFS      ++++S C   EL   EADTGM IPAASRLK+V+W + T    WA+QG WPAE DGTEV
Sbjct: 1353 MSSEIWEFDASDGSNVGGGNGAVLHGHYGGELWGLSVHPTLPQFATCGDDAMLRIWSIFEKRQVRFHTLEMSARACAYSPDGLRLAIGYGAAKSNISLKEASSGATKKQFEGKLAILDLDDFSVLHETRDSHKWITEIKYSPSGELLAVGSADTRIYMYVFDNSMLRLQHMITQHSSAITHLDFSVTNAKMQFLQSNCAGHELCFFEADTGMYIPAASRLKDVKWTSNTCPLSWAAQGTWPAENDGTEV 1601          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.250e-65
Identity = 115/240 (47.92%), Postives = 159/240 (66.25%), Query Frame = 1
Query:    4 GNELFEFNATSCDNLHEEGSPL---LRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYV-LAAMLTTHNSPIVAIDFSTDGR--YVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705
            G E++E +AT   +LH  G+       GH   ELW L  +PT P+F T G+D+ LRIW ++ +R +R  ++EM +RA++Y P+G + AVGFG PV  ++KQFDGK +++  DDF V+H ARDSQKHIT++K+AP G  LA GS D ++YVY+     + L  M+T H++ I+ +DFS      Y+RS C A EL   EADTGM IPAASRLK+V+WH+ T   GWA QG   A+ DG+ V
Sbjct: 1315 GAEVWELDATEGRSLHAGGALCCGHFGGHFGGELWALDAHPTLPQFATAGDDRMLRIWSLFDRRQVRCAQLEMMARALAYDPEGQRFAVGFGAPVPTATKQFDGKIVIMSADDFAVVHEARDSQKHITELKYAPGGDLLAAGSHDHRMYVYAVDGGALRLQNMITQHDAAILRVDFSAPANVTYLRSNCAAGELCFFEADTGMFIPAASRLKDVKWHSLTCPLGWAVQGTHAAQNDGSRV 1554          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S4IT62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT62_9STRA)

HSP 1 Score: 222 bits (566), Expect = 5.700e-63
Identity = 106/241 (43.98%), Postives = 157/241 (65.15%), Query Frame = 1
Query:    1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVY-----STVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEVA 708
             G+E++E +ATS  NLH  G PL +GH      GLA +P    F +VG D  LR+WD+Y  + ++   +EM +RA ++SPDGS +AVGFG P +ES+KQ+ GKWIV +  DF +L  ARDS+K IT++KW+P+G+ +A+GS D K+Y+Y     S+     L++++  H S I   DFS D +Y++  C A EL  +E  TG+ +PA+SRLK+V+WH+QT + GW  Q +W    D  E++
Sbjct: 1089 AGSEIWELSATSGANLHGSG-PLQQGHFGNHTSGLAISPNGLMFASVGSDSVLRLWDLYETKKVKTCPIEMAARACTFSPDGSYLAVGFGAPKKESAKQYHGKWIVCRVQDFSILFEARDSRKMITELKWSPNGEHIAVGSFDNKVYLYDCDMDSSNLTIKLSSVIDRHTSFIKHFDFSADNQYLQVNCGAHELSFYEVATGLHLPASSRLKDVKWHSQTCVLGWPVQSIWSPYKDDREIS 1328          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.710e-57
Identity = 96/225 (42.67%), Postives = 151/225 (67.11%), Query Frame = 1
Query:   10 ELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPA 684
            E+ E +A    +L+  G P+++GH   ELWGLA +PT PE+CTVG+D+ +R+WD+ + + +++ +++  +RAV+YSPDGSKIA+G G  V +  ++ DG ++VL E D  ++H  R+S++ ITDIK++P G +LA+GS D  +Y+Y     Y +  +   HNS I  +D S DG++V++ C A+EL   +A++G  IPA S LK+VQW + T   GW  +GV PA
Sbjct: 1331 EIVEISAADGTDLNN-GVPVIQGHYKHELWGLAMHPTKPEYCTVGDDQMVRVWDVATHKMLKSVKLDTMARAVTYSPDGSKIAIGLGARVGKGRQKKDGSFVVLNEKDLVMVHEGRNSKQWITDIKYSPDGATLAVGSYDNSVYLYDIGGGYAVKGVFEGHNSYITHLDLSVDGQFVQTNCGAYELKYCDANSGTGIPAVSTLKDVQWASWTCPLGWPVKGVHPA 1554          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A5A8CSV6_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSV6_CAFRO)

HSP 1 Score: 196 bits (498), Expect = 7.860e-54
Identity = 93/233 (39.91%), Postives = 139/233 (59.66%), Query Frame = 1
Query:    4 GNELFEFNATSCDNLHEE--GSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDG 696
            G ELFE  A    N HE+  G PL++GH   E+WGLA +P   E+CTVG+D  LR+WD           +E  +RAV+YSPDG  +AVG G  V     + DG+W+V+  +D++V+H A D++  ITD+K+ P+G +L + + DG++ +Y     + L  +   H SP+V  DFS DG+ VR+    +EL   +  TG  +P+A+ +++VQW TQTV  GW+  G W    +G
Sbjct: 1508 GCELFEVVAADGRNAHEDAGGGPLVQGHGRHEVWGLAAHPERAEYCTVGDDGTLRVWDASGPGQAAVAALEGVARAVAYSPDGRFVAVGLGGDVGRGRTREDGRWVVVSTEDWEVVHRAHDTRAAITDVKFCPAGATLGVAARDGRLLLYDVSAGFSLRGVFDRHRSPLVRFDFSRDGKKVRTASATWELLYADTATGAHLPSAAAMRDVQWATQTVAVGWSMLGAWEGGEEG 1740          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S1XVQ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVQ5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.030e-51
Identity = 98/250 (39.20%), Postives = 142/250 (56.80%), Query Frame = 1
Query:    4 GNELFEFNATSCDN--LHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESS----KQFDGKWIVLQ----------EDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705
            G ++FEF      N      G  +++GH  +E WGLA +P  PE+ TVG+D+ LRIW+  +   I    +E  +RA +YSPDG+K+A+GFG+  R S      + DG + V            +   +++H ARDS+K I+DIK++P G+ LA+G  D  IY+YS  +++        HNS I   DFS DG+Y++S C A+EL   +   G  I AAS L++  W T T   GW  QG+WP E DGT+V
Sbjct:  397 GADIFEFGVFGDGNEVRLRHGGAIVQGHCREETWGLATHPQLPEYATVGDDRTLRIWNATTHALIHVENIEHFARACAYSPDGTKLALGFGSGSRSSGGGRGSRIDGTFRVYSIKREGAWPDIDVSLKMIHEARDSRKWISDIKFSPDGKVLAVGGHDTAIYIYSVNQQFKKKGKFNKHNSYITHFDFSRDGKYLQSNCGAYELLFSDVSNGRQITAASSLRDAAWSTWTCTLGWPVQGIWPKEADGTDV 646          
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A812ZI92_9DINO (Eml5 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZI92_9DINO)

HSP 1 Score: 189 bits (480), Expect = 1.510e-51
Identity = 87/220 (39.55%), Postives = 133/220 (60.45%), Query Frame = 1
Query:   43 NLHEE--GSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDG 696
            N HE+  G PL++GH   E+WGLA +P   E+CTVG+D  LR+WD           +E  +RAV+YSPDG  +AVG G  V     + DG+W+V+  +D++V+H A D++  ITD+K+ P+G +L + + DG++ +Y     + L  +   H SP+V  DFS DG+ VR+    +EL   +  TG  +P+A+ +++VQW TQTV  GW+  G W    +G
Sbjct:    8 NAHEDAGGGPLVQGHGRHEVWGLAAHPERAEYCTVGDDGTLRVWDAAGPGQAAVAALEGVARAVAYSPDGRFVAVGLGGDVGRGRTREDGRWVVVSTEDWEVVHRAHDTRAAITDVKFCPAGATLGVAARDGRLLLYDVSAGFSLRGVFDRHRSPLVRFDFSRDGKKVRTASATWELLYADTATGAHLPSAAAMRDVQWATQTVAVGWSMLGAWEGGEEG 227          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6G6_9PHAE7.160e-15291.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE32_ECTSI4.530e-14491.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YLX5_AURAN1.970e-6646.32HELP domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S3JVR1_9STRA8.910e-6647.39Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SIX3_9STRA2.250e-6547.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4IT62_9STRA5.700e-6343.98Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A2R5G5S9_9STRA4.710e-5742.67Echinoderm microtubule-associated protein-like 1 n... [more]
A0A5A8CSV6_CAFRO7.860e-5439.91Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S1XVQ5_9STRA1.030e-5139.20Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A812ZI92_9DINO1.510e-5139.55Eml5 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15406contigL-elsbetiae_contig15406:2156..3583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.1
Seed ortholog evalue3.9e-125
Seed eggNOG ortholog2880.D8LE32
KEGG koko:K18595,ko:K18598
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule binding
EggNOG OGsCOG2319@1,KOG2106@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons5
Model size708
Cds size708
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15406.3821.1prot_L-elsbetiae_contig15406.3821.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15406 2156..3583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815628.669228-CDS-L-elsbetiae_contig15406:2155..23081622815628.669228-CDS-L-elsbetiae_contig15406:2155..2308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2156..2308 -
1691683000.881007-CDS-L-elsbetiae_contig15406:2155..23081691683000.881007-CDS-L-elsbetiae_contig15406:2155..2308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2156..2308 -
1622815628.683552-CDS-L-elsbetiae_contig15406:2457..25631622815628.683552-CDS-L-elsbetiae_contig15406:2457..2563Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2458..2563 -
1691683000.8991508-CDS-L-elsbetiae_contig15406:2457..25631691683000.8991508-CDS-L-elsbetiae_contig15406:2457..2563Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2458..2563 -
1622815628.6941628-CDS-L-elsbetiae_contig15406:2721..28311622815628.6941628-CDS-L-elsbetiae_contig15406:2721..2831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2722..2831 -
1691683000.910634-CDS-L-elsbetiae_contig15406:2721..28311691683000.910634-CDS-L-elsbetiae_contig15406:2721..2831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 2722..2831 -
1622815628.7052703-CDS-L-elsbetiae_contig15406:3085..32391622815628.7052703-CDS-L-elsbetiae_contig15406:3085..3239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 3086..3239 -
1691683000.9239454-CDS-L-elsbetiae_contig15406:3085..32391691683000.9239454-CDS-L-elsbetiae_contig15406:3085..3239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 3086..3239 -
1622815628.7224884-CDS-L-elsbetiae_contig15406:3398..35831622815628.7224884-CDS-L-elsbetiae_contig15406:3398..3583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 3399..3583 -
1691683000.93386-CDS-L-elsbetiae_contig15406:3398..35831691683000.93386-CDS-L-elsbetiae_contig15406:3398..3583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15406 3399..3583 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15406.3821.1

>prot_L-elsbetiae_contig15406.3821.1 ID=prot_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGED
KQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQF
DGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYS
TVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVI
PAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEVA
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mRNA from alignment at L-elsbetiae_contig15406:2156..3583-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15406.3821.1 ID=mRNA_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig15406:2156..3583- (Laminarionema elsbetiae ELsaHSoW15)
GTAGGTAACGAGCTGTTCGAGTTTAACGCAACTAGCTGCGACAACCTGCA CGAGGAAGGGAGCCCGCTCCTAAGAGGGCACGCCGCAAAAGAGCTTTGGG GTTTAGCGTGCAACCCGACAGCTCCTGAGTTTTGCACCGTCGGGGAGGAC AAGCAGCTCCGTATTTGGGACATCTACTCAAAGCGGTGGGTGAAGACATC CATGCCGAGCTAGGAGACAATTCTCCGCGATAAGCATTATGAACGGGTGC AAACCCAATCTGGCATTGTGGCCATAGCATGAAGGATGTTGCCACCAACT GCGTTATTTCGACCCGCTTGGTCCTTGTCCCTTGTCAATACTAGGCCTAT CCGAAACCATGAGGTGGAGATGCCTTCGAGGGCAGTTTCCTACTCCCCGG ATGGATCGAAAATCGCCGTTGGTTTCGGAACGCCGGTCAGGGAGAGCAGC AAGCAGTTCGACGGCAAGTGGATAGTCCTCCAAGAAGACGATTTTCAGGT TTGTGGACGGTTAGATGGTAATCCGCGTACGGTTCCTGCCTACACCGTTT TCCTTCCGCCTAAAGTATATGATGCATACCAATGTTGATCTTTCGCTTTT AGACTGCGCTGCCTGGCAATGCCTCGGCAGAGAAAAGTTCCACGTTCGAG CGTGGAACTCTCCTCACCCTGTTCCTCGAATGTTATCGACTATCGGCTTC ATGGACCCGTACAAACATCTCATGATTTATCCATATTTTTTGCGTACAAA AGGTTCTTCACGCGGCACGTGACTCTCAGAAACACATCACGGACATCAAG TGGGCACCGAGCGGCCAGAGCTTGGCGATGGGGTCCGCTGACGGCAAGAT CTACGTGTATAGGTGGGTGTCGGAGTGTTCACTCGATGTGTTAAGAACGT TGGTCTCACAACGGCTGTGCTATGTTTAGACAACATCACGACATTTCCGG AACGGCATCTTCATTCGTTGTTGTTGGCGATCATAACTCCTCGTCCTTTT CGCTCGGTTCTGAATCGCAGCACGGTCGAGAGATACGTTCTTGCCGCCAT GCTGACGACACACAACAGTCCTATCGTCGCCATAGACTTCAGTACGGACG GCCGCTACGTGCGCTCAACGTGCCAGGTGAGGCCCCTGTCGTGGTTGGCA TTTGGTTAGCTTTTTTTGTACGGGCAATTCGAGGGTTCCGGATGATGCTT CCGATCTGTCTCATAAGCACTTGACCCTCCCTTCGGCAAACCCTCGCTGT GCTTCGTTCCCATCCCATGTTTTAGGCTTTCGAGCTATTTTCTCATGAGG CGGACACTGGCATGGTCATACCGGCGGCTTCTCGGCTGAAAAACGTCCAG TGGCATACACAAACGGTGCTGTTTGGTTGGGCCTCTCAAGGGGTGTGGCC CGCTGAACTAGATGGCACAGAGGTGGCT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15406:2156..3583-

>mRNA_L-elsbetiae_contig15406.3821.1 ID=mRNA_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig15406:2156..3583- (Laminarionema elsbetiae ELsaHSoW15)
GTAGGTAACGAGCTGTTCGAGTTTAACGCAACTAGCTGCGACAACCTGCA
CGAGGAAGGGAGCCCGCTCCTAAGAGGGCACGCCGCAAAAGAGCTTTGGG
GTTTAGCGTGCAACCCGACAGCTCCTGAGTTTTGCACCGTCGGGGAGGAC
AAGCAGCTCCGTATTTGGGACATCTACTCAAAGCGGTAGGTAACGAGCTG
TTCGAGTTTAACGCAACTAGCTGCGACAACCTGCACGAGGAAGGGAGCCC
GCTCCTAAGAGGGCACGCCGCAAAAGAGCTTTGGGGTTTAGCGTGCAACC
CGACAGCTCCTGAGTTTTGCACCGTCGGGGAGGACAAGCAGCTCCGTATT
TGGGACATCTACTCAAAGCGGCCTATCCGAAACCATGAGGTGGAGATGCC
TTCGAGGGCAGTTTCCTACTCCCCGGATGGATCGAAAATCGCCGTTGGTT
TCGGAACGCCGGTCAGGGAGAGCAGCAAGCAGTTCGACGGCAAGTGGATA
GTCCTCCAAGAAGACGATTTTCAGGCCTATCCGAAACCATGAGGTGGAGA
TGCCTTCGAGGGCAGTTTCCTACTCCCCGGATGGATCGAAAATCGCCGTT
GGTTTCGGAACGCCGGTCAGGGAGAGCAGCAAGCAGTTCGACGGCAAGTG
GATAGTCCTCCAAGAAGACGATTTTCAGGTTCTTCACGCGGCACGTGACT
CTCAGAAACACATCACGGACATCAAGTGGGCACCGAGCGGCCAGAGCTTG
GCGATGGGGTCCGCTGACGGCAAGATCTACGTGTATAGGTTCTTCACGCG
GCACGTGACTCTCAGAAACACATCACGGACATCAAGTGGGCACCGAGCGG
CCAGAGCTTGGCGATGGGGTCCGCTGACGGCAAGATCTACGTGTATAGCA
CGGTCGAGAGATACGTTCTTGCCGCCATGCTGACGACACACAACAGTCCT
ATCGTCGCCATAGACTTCAGTACGGACGGCCGCTACGTGCGCTCAACGTG
CCAGCACGGTCGAGAGATACGTTCTTGCCGCCATGCTGACGACACACAAC
AGTCCTATCGTCGCCATAGACTTCAGTACGGACGGCCGCTACGTGCGCTC
AACGTGCCAGGCTTTCGAGCTATTTTCTCATGAGGCGGACACTGGCATGG
TCATACCGGCGGCTTCTCGGCTGAAAAACGTCCAGTGGCATACACAAACG
GTGCTGTTTGGTTGGGCCTCTCAAGGGGTGTGGCCCGCTGAACTAGATGG
CACAGAGGTGGCTGCTTTCGAGCTATTTTCTCATGAGGCGGACACTGGCA
TGGTCATACCGGCGGCTTCTCGGCTGAAAAACGTCCAGTGGCATACACAA
ACGGTGCTGTTTGGTTGGGCCTCTCAAGGGGTGTGGCCCGCTGAACTAGA
TGGCACAGAGGTGGCT
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