mRNA_L-elsbetiae_contig15406.3821.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A6H5J6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6G6_9PHAE) HSP 1 Score: 452 bits (1164), Expect = 7.160e-152 Identity = 214/235 (91.06%), Postives = 225/235 (95.74%), Query Frame = 1 Query: 1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705 GNELFEFNATS DNLHEEG PLLRGHAA ELWGL+C+P+APEFCTVGEDKQLRIWDIYSKRP+R HEVEMPSRAV+YSPDGSKIAVGFG P+RESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMG+ADGK+YVY+T E+YVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQA+ELFSHEADTGMVIPAASRLKNVQW TQTVLFGWASQG WP ELDGTEV Sbjct: 268 AGNELFEFNATSGDNLHEEGKPLLRGHAANELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVYNTDEKYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAYELFSHEADTGMVIPAASRLKNVQWDTQTVLFGWASQGAWPPELDGTEV 502
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 4.530e-144 Identity = 215/235 (91.49%), Postives = 226/235 (96.17%), Query Frame = 1 Query: 1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705 GNELFEFNATS DNLHEEG PLLRGHAA ELWGL+C+P+APEFCTVGEDKQLRIWDIYSKRP+R HEVEMPSRAV+YSPDGSKIAVGFG P+RESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMG+ADGK+YVY+T E+YVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQA+ELFSHEADTGMVIPAASRLKNVQW TQTVLFGWASQGVWP ELDGTEV Sbjct: 1083 AGNELFEFNATSGDNLHEEGKPLLRGHAAHELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVYNTDEKYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAYELFSHEADTGMVIPAASRLKNVQWDTQTVLFGWASQGVWPPELDGTEV 1317
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: F0YLX5_AURAN (HELP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLX5_AURAN) HSP 1 Score: 226 bits (576), Expect = 1.970e-66 Identity = 107/231 (46.32%), Postives = 157/231 (67.97%), Query Frame = 1 Query: 1 VGNELFEFNATSCDNLHEEGSPLLR---GHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPA 684 VG EL+E + NLH EG L GH ELW LAC+PT P+FC+ G+DK LR+W ++ KR +R +++EM SRA +YSPDG ++AVGFG PV++++KQFDGK++++ DDF ++H ARDSQK IT++K+APSG+ LA+GS D +IYVY+T R A HNS + +D+S D +YV+S + +E + A G + S+LK+V++ + ++GW +QG W A Sbjct: 334 VGAELWEVDTAEGKNLHPEGPVLFGHFGGHYGGELWALACHPTLPQFCSAGDDKMLRVWSLFEKRMVRCNQLEMMSRACAYSPDGKQVAVGFGAPVKQTAKQFDGKFVIMNADDFAIVHEARDSQKWITELKYAPSGELLAVGSFDNRIYVYTTHMR----AKCLKHNSFVTHLDWSADSKYVQSDARDYEHLYYGALDGAHVRLPSQLKDVEFAGWSCIYGWPTQGAWAA 560
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S3JVR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVR1_9STRA) HSP 1 Score: 230 bits (587), Expect = 8.910e-66 Identity = 118/249 (47.39%), Postives = 163/249 (65.46%), Query Frame = 1 Query: 1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTP-----VRESS-----KQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYV-LAAMLTTHNSPIVAIDFSTDG---RYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705 + +E++EF+A+ N+ +L GH ELWGL+ +PT P+F T G+D LRIW I+ KR +R H +EM +RA +YSPDG ++A+G+G ++E+S KQF+GK +L DDF VLH RDS K IT+IK++PSG+ LA+GSAD +IY+Y + L M+T H+S I +DFS ++++S C EL EADTGM IPAASRLK+V+W + T WA+QG WPAE DGTEV Sbjct: 1353 MSSEIWEFDASDGSNVGGGNGAVLHGHYGGELWGLSVHPTLPQFATCGDDAMLRIWSIFEKRQVRFHTLEMSARACAYSPDGLRLAIGYGAAKSNISLKEASSGATKKQFEGKLAILDLDDFSVLHETRDSHKWITEIKYSPSGELLAVGSADTRIYMYVFDNSMLRLQHMITQHSSAITHLDFSVTNAKMQFLQSNCAGHELCFFEADTGMYIPAASRLKDVKWTSNTCPLSWAAQGTWPAENDGTEV 1601
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA) HSP 1 Score: 229 bits (584), Expect = 2.250e-65 Identity = 115/240 (47.92%), Postives = 159/240 (66.25%), Query Frame = 1 Query: 4 GNELFEFNATSCDNLHEEGSPL---LRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYV-LAAMLTTHNSPIVAIDFSTDGR--YVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705 G E++E +AT +LH G+ GH ELW L +PT P+F T G+D+ LRIW ++ +R +R ++EM +RA++Y P+G + AVGFG PV ++KQFDGK +++ DDF V+H ARDSQKHIT++K+AP G LA GS D ++YVY+ + L M+T H++ I+ +DFS Y+RS C A EL EADTGM IPAASRLK+V+WH+ T GWA QG A+ DG+ V Sbjct: 1315 GAEVWELDATEGRSLHAGGALCCGHFGGHFGGELWALDAHPTLPQFATAGDDRMLRIWSLFDRRQVRCAQLEMMARALAYDPEGQRFAVGFGAPVPTATKQFDGKIVIMSADDFAVVHEARDSQKHITELKYAPGGDLLAAGSHDHRMYVYAVDGGALRLQNMITQHDAAILRVDFSAPANVTYLRSNCAAGELCFFEADTGMFIPAASRLKDVKWHSLTCPLGWAVQGTHAAQNDGSRV 1554
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S4IT62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT62_9STRA) HSP 1 Score: 222 bits (566), Expect = 5.700e-63 Identity = 106/241 (43.98%), Postives = 157/241 (65.15%), Query Frame = 1 Query: 1 VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVY-----STVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEVA 708 G+E++E +ATS NLH G PL +GH GLA +P F +VG D LR+WD+Y + ++ +EM +RA ++SPDGS +AVGFG P +ES+KQ+ GKWIV + DF +L ARDS+K IT++KW+P+G+ +A+GS D K+Y+Y S+ L++++ H S I DFS D +Y++ C A EL +E TG+ +PA+SRLK+V+WH+QT + GW Q +W D E++ Sbjct: 1089 AGSEIWELSATSGANLHGSG-PLQQGHFGNHTSGLAISPNGLMFASVGSDSVLRLWDLYETKKVKTCPIEMAARACTFSPDGSYLAVGFGAPKKESAKQYHGKWIVCRVQDFSILFEARDSRKMITELKWSPNGEHIAVGSFDNKVYLYDCDMDSSNLTIKLSSVIDRHTSFIKHFDFSADNQYLQVNCGAHELSFYEVATGLHLPASSRLKDVKWHSQTCVLGWPVQSIWSPYKDDREIS 1328
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA) HSP 1 Score: 205 bits (522), Expect = 4.710e-57 Identity = 96/225 (42.67%), Postives = 151/225 (67.11%), Query Frame = 1 Query: 10 ELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPA 684 E+ E +A +L+ G P+++GH ELWGLA +PT PE+CTVG+D+ +R+WD+ + + +++ +++ +RAV+YSPDGSKIA+G G V + ++ DG ++VL E D ++H R+S++ ITDIK++P G +LA+GS D +Y+Y Y + + HNS I +D S DG++V++ C A+EL +A++G IPA S LK+VQW + T GW +GV PA Sbjct: 1331 EIVEISAADGTDLNN-GVPVIQGHYKHELWGLAMHPTKPEYCTVGDDQMVRVWDVATHKMLKSVKLDTMARAVTYSPDGSKIAIGLGARVGKGRQKKDGSFVVLNEKDLVMVHEGRNSKQWITDIKYSPDGATLAVGSYDNSVYLYDIGGGYAVKGVFEGHNSYITHLDLSVDGQFVQTNCGAYELKYCDANSGTGIPAVSTLKDVQWASWTCPLGWPVKGVHPA 1554
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A5A8CSV6_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSV6_CAFRO) HSP 1 Score: 196 bits (498), Expect = 7.860e-54 Identity = 93/233 (39.91%), Postives = 139/233 (59.66%), Query Frame = 1 Query: 4 GNELFEFNATSCDNLHEE--GSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDG 696 G ELFE A N HE+ G PL++GH E+WGLA +P E+CTVG+D LR+WD +E +RAV+YSPDG +AVG G V + DG+W+V+ +D++V+H A D++ ITD+K+ P+G +L + + DG++ +Y + L + H SP+V DFS DG+ VR+ +EL + TG +P+A+ +++VQW TQTV GW+ G W +G Sbjct: 1508 GCELFEVVAADGRNAHEDAGGGPLVQGHGRHEVWGLAAHPERAEYCTVGDDGTLRVWDASGPGQAAVAALEGVARAVAYSPDGRFVAVGLGGDVGRGRTREDGRWVVVSTEDWEVVHRAHDTRAAITDVKFCPAGATLGVAARDGRLLLYDVSAGFSLRGVFDRHRSPLVRFDFSRDGKKVRTASATWELLYADTATGAHLPSAAAMRDVQWATQTVAVGWSMLGAWEGGEEG 1740
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A7S1XVQ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVQ5_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.030e-51 Identity = 98/250 (39.20%), Postives = 142/250 (56.80%), Query Frame = 1 Query: 4 GNELFEFNATSCDN--LHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESS----KQFDGKWIVLQ----------EDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDGTEV 705 G ++FEF N G +++GH +E WGLA +P PE+ TVG+D+ LRIW+ + I +E +RA +YSPDG+K+A+GFG+ R S + DG + V + +++H ARDS+K I+DIK++P G+ LA+G D IY+YS +++ HNS I DFS DG+Y++S C A+EL + G I AAS L++ W T T GW QG+WP E DGT+V Sbjct: 397 GADIFEFGVFGDGNEVRLRHGGAIVQGHCREETWGLATHPQLPEYATVGDDRTLRIWNATTHALIHVENIEHFARACAYSPDGTKLALGFGSGSRSSGGGRGSRIDGTFRVYSIKREGAWPDIDVSLKMIHEARDSRKWISDIKFSPDGKVLAVGGHDTAIYIYSVNQQFKKKGKFNKHNSYITHFDFSRDGKYLQSNCGAYELLFSDVSNGRQITAASSLRDAAWSTWTCTLGWPVQGIWPKEADGTDV 646
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Match: A0A812ZI92_9DINO (Eml5 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZI92_9DINO) HSP 1 Score: 189 bits (480), Expect = 1.510e-51 Identity = 87/220 (39.55%), Postives = 133/220 (60.45%), Query Frame = 1 Query: 43 NLHEE--GSPLLRGHAAKELWGLACNPTAPEFCTVGEDKQLRIWDIYSKRPIRNHEVEMPSRAVSYSPDGSKIAVGFGTPVRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGSADGKIYVYSTVERYVLAAMLTTHNSPIVAIDFSTDGRYVRSTCQAFELFSHEADTGMVIPAASRLKNVQWHTQTVLFGWASQGVWPAELDG 696 N HE+ G PL++GH E+WGLA +P E+CTVG+D LR+WD +E +RAV+YSPDG +AVG G V + DG+W+V+ +D++V+H A D++ ITD+K+ P+G +L + + DG++ +Y + L + H SP+V DFS DG+ VR+ +EL + TG +P+A+ +++VQW TQTV GW+ G W +G Sbjct: 8 NAHEDAGGGPLVQGHGRHEVWGLAAHPERAEYCTVGDDGTLRVWDAAGPGQAAVAALEGVARAVAYSPDGRFVAVGLGGDVGRGRTREDGRWVVVSTEDWEVVHRAHDTRAAITDVKFCPAGATLGVAARDGRLLLYDVSAGFSLRGVFDRHRSPLVRFDFSRDGKKVRTASATWELLYADTATGAHLPSAAAMRDVQWATQTVAVGWSMLGAWEGGEEG 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15406.3821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15406.3821.1 >prot_L-elsbetiae_contig15406.3821.1 ID=prot_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp VGNELFEFNATSCDNLHEEGSPLLRGHAAKELWGLACNPTAPEFCTVGEDback to top mRNA from alignment at L-elsbetiae_contig15406:2156..3583- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15406.3821.1 ID=mRNA_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig15406:2156..3583- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15406:2156..3583- >mRNA_L-elsbetiae_contig15406.3821.1 ID=mRNA_L-elsbetiae_contig15406.3821.1|Name=mRNA_L-elsbetiae_contig15406.3821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig15406:2156..3583- (Laminarionema elsbetiae ELsaHSoW15)back to top |