mRNA_L-elsbetiae_contig1540.3815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1540.3815.1
Unique NamemRNA_L-elsbetiae_contig1540.3815.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 7.420e-209
Identity = 268/353 (75.92%), Postives = 292/353 (82.72%), Query Frame = 1
Query:  370 TSMTGEKET--------PMDTPPADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRV-------GKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNEE 1383
            TS  G KE         PM+ P  DG  C+TYDEDV +A +L  TCEWNTYMCCWTGHDG    YGNADVCRV+DYP EGDVLE+PRDDEGPVYCHGFAW + +D+D+HI PLYHYV NVN TDDGGYYGNV G P CGCIE+MP+VS AACSKFG +GI+PCWDNSLRSQYKY L+EP GEME NLVRECDNEDVPDYDFR C HNTYMCCWTENDGQGMADNTDVCRV         TEYPGESEGEVHCHGFVWPEDA+DKYIHLLAQFVQH+DH+DRRGYFGN+  APMCGCIE+MP+VSEADCTTYDNEPGREGKFTACT+NDLR+ +EE Y    L NLV ECDN E
Sbjct:  134 TSDGGSKEEXXXXXEPIPMENP-EDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNNDLRTRYEEEYPMGELDNLVGECDNAE 485          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 8.080e-201
Identity = 259/336 (77.08%), Postives = 284/336 (84.52%), Query Frame = 1
Query:  397 PMDTPPADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRV-------GKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNEE 1383
            PM+ P  DG  C+TYDEDV +A +L  TCEWNTYMCCWTGHDG G  YGN DVCRV+DYP EGDVLE+PRDDEGPVYCHGFAW +G+D+D+HI PLYHYV NVN TDDGGYYGNV G P CGCIE+MP+VS AACS+FG +GI+PC  NSLRS YK  L+EP GE+E NLVRECDNEDVPDYDFR C HNTYMCCWTENDGQGMADNTDVCRV         TEYPGESEGEVHCHGFVWPEDA+DKYIHLLAQFVQH+DH+DRRGYFGN+  APMCGCIE+MP+VSEADCTTYDNEPGREGKFTACT NDLR+ +EE Y    L NLV ECDNEE
Sbjct:  108 PMENP-EDGMSCSTYDEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTKNDLRTRYEEEYPMGELDNLVGECDNEE 442          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.990e-183
Identity = 237/346 (68.50%), Postives = 276/346 (79.77%), Query Frame = 1
Query:  370 TSMTGEKE-TPMDTPPADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRV------GKT-EYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNEE 1383
            T   GE+E  PM+ P  DG  C+TYDEDV +AKLLD TCEW+TYMCCWTG DG      N+DVCRV+DYP EGD  EMPRD EG VYCHGFAW EG+DVDTHI PLYHYV+NV  T++GG+YGNV G+P+CGCIEEMP VS++ CS++ W+GI  C +N L SQY+  L EP G M+ NLVR CDNEDVPDYD+  C HNTYMCCWTENDG+GMADNTDVCRV      G+T E+PG+SEGEVHCHGFVWPEDA+DKYIHLL+QFVQ++DH+DRRGY+GN+  APMCGCIE+MP VSEADCTTYD +P REGKFTACT NDLR+ +E  Y    L NLV+ CDN E
Sbjct:  127 TDDGGEEEGAPMENPD-DGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGSDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWVEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGAPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRTCDNEDVPDYDYGSCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEAEYPTGELANLVDTCDNAE 471          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.020e-155
Identity = 221/437 (50.57%), Postives = 277/437 (63.39%), Query Frame = 1
Query:   91 TFLALCAAPLLLAXXXXXXXXXXXXXXXXXDSADGSGVAAPTQYPNPTIGYKETPAPADTEEVVTEEEEGTPVTEEXXXXXXXXXXXXXXXXXTSMTGEKETPMDTPPADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRV------GKT-EYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNE 1380
            +FL++CA PLLLA                  S D S    P+     T       A AD+++ V  E    P  ++                   +  E+  P++    DG++C+TYDEDV +A LL   CEWNTYMCCWTG+DG      N DVCRV DYP EG+ LE PRD EG VYCHGF W +G+DV+T+I PLYH V N   T++GGYYGNV G+PQCGC+EEMP+VS + CS+F  DGI  C ++ L S Y   ++EPNG +E NLVR CDN DVPD+DFR C+ +TYMCCWTEND +G+ DNTDVCR+      G+T EYPG+SEG+VHCHG VWPEDA+DKYIHLLAQ+VQ +DH   +GY+GN+  APMCGC EDMPEVS+ADCT Y      E +   C  NDLR+ ++  Y    L NLV  CDN+
Sbjct:    4 SFLSVCAGPLLLALAANACDDSSAPAPTPEYSGDSSKGTTPSPVSPATSPTDTVVAFADSDDYVEPE----PTDDDG-----------------EVEDEEGVPLEND-GDGEVCSTYDEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDNYDVPDFDFRECDSHTYMCCWTENDAKGVLDNTDVCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHLLAQYVQTFDHIGNKGYYGNIEGAPMCGCAEDMPEVSKADCTNYSPTEEDEDRIRGCDPNDLRTRYDVLYPDGDLDNLVGRCDNQ 418          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 1.420e-150
Identity = 206/318 (64.78%), Postives = 222/318 (69.81%), Query Frame = 1
Query:  451 VSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRV-------GKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNEE 1383
            V +A +L  TCEWNTYMCCWTGHDG    YGNADVCRV++YP EGDVLE+PRDDEGPVYCHGFAW +G+D+D+HI PLYHYV NVN TDDGGYYGNV G P CGCIE+MP+VS AACSKFG +GI+PCWDNSLRSQYKY L+EP GEME NLVRECDNEDVPDYDFR C HNTYMCCWTENDGQGMADNTDVCRV         TEYPG SEGEV                                                     SEADCTTYDNEPGREGKFTACT NDLR+ +EE Y    L NLV ECDN E
Sbjct:    4 VDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGGSEGEV-----------------------------------------------------SEADCTTYDNEPGREGKFTACTKNDLRTRYEEEYPMGELSNLVGECDNAE 268          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 2.640e-139
Identity = 213/434 (49.08%), Postives = 256/434 (58.99%), Query Frame = 1
Query:  376 MTG-EKETPMDTPPADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYY-----GNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNT----------------------------------------DVCRV-------GKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFG---------------------------------------------NLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVLPNLVEECDNEE 1383
            MTG  ++ PM+ P  DG  C+TY+E V +AKLLD TCEW+ YMCCWTG+DG      N+DVCRV+DYP EGD  EMPR+ EG V CHGFAW EG+DVDTHI PLYHYV+NV  T++ G+Y      +V G+P+CGCIEE+P VS + CS++ W+GI  C +N L SQY+  L EP G M+ NLVR CDNED+PDYD   C HNTYMCC TENDGQGMA+NT                                        DVCRV       G  E+ G+SE E H HGFVW EDA+DKYIHLL+QFVQ +DH+DRRGY+G                                             ++  APM GC+E+MP VSEAD TTYD +P REGKFTACT NDL + + E Y    L NLV   DN E
Sbjct:   11 MTGARRKGPMENPD-DGASCSTYEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNEDIPDYDHGSCSHNTYMCCLTENDGQGMAENTVRRRVPAVASCVEFSCYSADRKDVGLTMLSVILGHLGATKDVCRVLDYPSVGGALEFAGDSEREAHRHGFVWTEDATDKYIHLLSQFVQKFDHRDRRGYYGKYITVGKAAHNVIMVNGRTTGPGEDNTNNPLSPPPNVSHVILVVTSIEGAPMYGCVEEMPVVSEADGTTYDTDPEREGKFTACTTNDLCTRYAEDYPTGELANLVGTYDNAE 443          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.150e-72
Identity = 108/171 (63.16%), Postives = 126/171 (73.68%), Query Frame = 1
Query:  415 ADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDD-GGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDN 924
            +DG  C+TYDED+ +AKLLDGTCEW+TYMCC+T HD       N DVC V   P+EG  LEMP D EGPVYCHGFAW EG+DV+ HI PLYHYV+N+  T++ GGYYGNV G+P+CGCIEEMP VS A CS+F  DGI  C +  L SQY   L+ P GEME NLVR CDN
Sbjct:   16 SDGGSCSTYDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 2.020e-62
Identity = 99/171 (57.89%), Postives = 116/171 (67.84%), Query Frame = 1
Query:  415 ADGDICTTYDEDVSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEMPRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDD-GGYYGNVVGSPQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMETNLVRECDN 924
            +DG  CTTYDED+ +AKLLD TCEW+TYMCC+T HD       N DVC V   PNEG V           YCHGFAW +G+DV+ HI PLYHYV+N+  T++ GGYYG+V G+P+CGCIEEMP VS A CS+F  DGI  C +  L SQY   L  P GEME NLVR CDN
Sbjct:   23 SDGGSCTTYDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSV---PNEGSV-----------YCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7G8D2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D2_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 2.020e-47
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1
Query:  931 VPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRVGKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFY---RGAVLPNLVEECDNEEG 1386
            V ++DF  C++NT+MCCW   +G  + DNTDVC     E+PG+SEG VHCHGFVWPE+ASD +I  LA  V   +H D + Y GN+P AP+C C+E+MPEVS ADCT Y         F AC+ NDLR +++E Y   RG  L  LV++CDN  G
Sbjct:   51 VKNFDFNQCDYNTWMCCWDGRNGLAVKDNTDVCSYRGEEFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELYPTGRGRDL--LVKKCDNRYG 203          
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Match: D7G8C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 6.760e-47
Identity = 80/157 (50.96%), Postives = 103/157 (65.61%), Query Frame = 1
Query:  925 EDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRVGKTEYPGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAPMCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFY---RGAVLPNLVEECDNEEG 1386
            E V ++DF  C++NT+MCCW   +G  + DNTDVC     E+PG+SEG VHCHGFVWPE+ASD +I  LA  V   +H D + Y GN+P AP+C C+E+MPEVS ADCT Y         F AC+ NDLR +++E Y   RG  L  LV++CDN  G
Sbjct:  113 ERVKNFDFNQCDYNTWMCCWDGRNGLAVKDNTDVCSYRGEEFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELYPTGRGRDL--LVKKCDNRYG 267          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1540.3815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2N0_ECTSI7.420e-20975.92Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7G2N2_ECTSI8.080e-20177.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT55_ECTSI1.990e-18368.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT54_ECTSI1.020e-15550.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JT81_9PHAE1.420e-15064.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L319_9PHAE2.640e-13949.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT53_ECTSI4.150e-7263.16Imm downregulated 17 n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L9G6_9PHAE2.020e-6257.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8D2_ECTSI2.020e-4750.97Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G8C5_ECTSI6.760e-4750.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1540contigL-elsbetiae_contig1540:12304..15646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score599.0
Seed ortholog evalue1.9e-168
Seed eggNOG ortholog2880.D7G2N0
Hectar predicted targeting categoryother localisation
EggNOG OGs2E0FN@1,2S7W7@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1389
Cds size1389
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815628.1329067-CDS-L-elsbetiae_contig1540:12303..127591622815628.1329067-CDS-L-elsbetiae_contig1540:12303..12759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 12304..12759 +
1691683000.5637548-CDS-L-elsbetiae_contig1540:12303..127591691683000.5637548-CDS-L-elsbetiae_contig1540:12303..12759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 12304..12759 +
1622815628.1461155-CDS-L-elsbetiae_contig1540:12984..131571622815628.1461155-CDS-L-elsbetiae_contig1540:12984..13157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 12985..13157 +
1691683000.5735433-CDS-L-elsbetiae_contig1540:12984..131571691683000.5735433-CDS-L-elsbetiae_contig1540:12984..13157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 12985..13157 +
1622815628.1590142-CDS-L-elsbetiae_contig1540:13536..136441622815628.1590142-CDS-L-elsbetiae_contig1540:13536..13644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 13537..13644 +
1691683000.5816298-CDS-L-elsbetiae_contig1540:13536..136441691683000.5816298-CDS-L-elsbetiae_contig1540:13536..13644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 13537..13644 +
1622815628.1721776-CDS-L-elsbetiae_contig1540:14206..142751622815628.1721776-CDS-L-elsbetiae_contig1540:14206..14275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 14207..14275 +
1691683000.590646-CDS-L-elsbetiae_contig1540:14206..142751691683000.590646-CDS-L-elsbetiae_contig1540:14206..14275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 14207..14275 +
1622815628.186086-CDS-L-elsbetiae_contig1540:14534..147481622815628.186086-CDS-L-elsbetiae_contig1540:14534..14748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 14535..14748 +
1691683000.6010308-CDS-L-elsbetiae_contig1540:14534..147481691683000.6010308-CDS-L-elsbetiae_contig1540:14534..14748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 14535..14748 +
1622815628.1966305-CDS-L-elsbetiae_contig1540:15033..151971622815628.1966305-CDS-L-elsbetiae_contig1540:15033..15197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 15034..15197 +
1691683000.609316-CDS-L-elsbetiae_contig1540:15033..151971691683000.609316-CDS-L-elsbetiae_contig1540:15033..15197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 15034..15197 +
1622815628.2117083-CDS-L-elsbetiae_contig1540:15441..156461622815628.2117083-CDS-L-elsbetiae_contig1540:15441..15646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 15442..15646 +
1691683000.6172314-CDS-L-elsbetiae_contig1540:15441..156461691683000.6172314-CDS-L-elsbetiae_contig1540:15441..15646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1540 15442..15646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1540.3815.1prot_L-elsbetiae_contig1540.3815.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1540 12304..15646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1540.3815.1

>prot_L-elsbetiae_contig1540.3815.1 ID=prot_L-elsbetiae_contig1540.3815.1|Name=mRNA_L-elsbetiae_contig1540.3815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=463bp
ICQPTRTIASRGSRCHHQQTKMKLAAQNNRTFLALCAAPLLLALAASAST
STDDNPAPSPDSADGSGVAAPTQYPNPTIGYKETPAPADTEEVVTEEEEG
TPVTEEEDKEGTVTSTMGDDEGTTSMTGEKETPMDTPPADGDICTTYDED
VSIAKLLDGTCEWNTYMCCWTGHDGQGSFYGNADVCRVMDYPNEGDVLEM
PRDDEGPVYCHGFAWEEGSDVDTHITPLYHYVRNVNNTDDGGYYGNVVGS
PQCGCIEEMPMVSHAACSKFGWDGIQPCWDNSLRSQYKYNLEEPNGEMET
NLVRECDNEDVPDYDFRICEHNTYMCCWTENDGQGMADNTDVCRVGKTEY
PGESEGEVHCHGFVWPEDASDKYIHLLAQFVQHYDHKDRRGYFGNLPDAP
MCGCIEDMPEVSEADCTTYDNEPGREGKFTACTDNDLRSSFEEFYRGAVL
PNLVEECDNEEG*
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mRNA from alignment at L-elsbetiae_contig1540:12304..15646+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1540.3815.1 ID=mRNA_L-elsbetiae_contig1540.3815.1|Name=mRNA_L-elsbetiae_contig1540.3815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3343bp|location=Sequence derived from alignment at L-elsbetiae_contig1540:12304..15646+ (Laminarionema elsbetiae ELsaHSoW15)
ATTTGCCAACCAACCCGCACGATAGCCAGCCGCGGCTCGCGCTGCCACCA TCAACAAACAAAAATGAAGCTCGCCGCCCAAAATAACCGGACATTCTTGG CGCTCTGCGCCGCACCGCTGCTGCTGGCCCTAGCCGCGTCCGCCTCCACC TCCACCGACGACAACCCGGCGCCGTCCCCCGACTCGGCTGACGGCTCCGG CGTCGCTGCCCCGACCCAGTACCCCAACCCGACCATCGGATACAAGGAGA CACCCGCGCCCGCTGATACCGAGGAAGTGGTGACCGAGGAAGAAGAAGGG ACGCCGGTGACGGAGGAAGAGGACAAGGAAGGAACTGTGACTTCCACGAT GGGGGACGATGAAGGAACGACGTCCATGACGGGGGAGAAAGAAACGCCGA TGGACACTCCTCCTGCGGATGGAGACATCTGCACCACCTACGACGAGGAC GTAAGTGTACTTATCCAGATTTGGCCGCTGTGTTTTCGCCGGGGGGGGGA CTGATTATGAAGGCGTGTGCATGTGTACGATTATGCCTGGTATTTTCGCT GCAATGACAGCCACGGCTATTTACTGCAGAGATACGTCAAGATACATCAT GACCACATCAGCATTTGTTCTCAATCGCCTTCCACGGATTCGCTCATCTT TTCCCCCCCTCCACCCGAACGCCAGGCGGAGATCGCTAAACTCCTCGATG GCACCTGCGAGTGGAACACATACATGTGCTGCTGGACCGGCCACGACGGG CAGGGGAGCTTTTACGGCAACGCCGACGTCTGCCGCGTGATGGACTACCC GAACGAGGGGGACGTCCTCGAGATGCCCCGCGACGACGAGGGCCCCGTGT ACTGGTGAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCATCATTTCTATTT TCTTTATCTTCTTTCCTGGCGTCACTTTTTTTTTTTTTNNNNNNNNNNCC CGGGGTGGGTAACCCCGGCCGGGGGGGACGTCCTCGGGTTGCCCCGGCGC GCGGAGGGCCCCGTGTTCTGGTGGGCCCCCCCCCCCCCCCCCTCAACTGT TTATTTTTACAGATGTATCAGTCGTCTTGTCCCAATTGTTTTTTACTTTT GTCGCCCGCTGAAAAAAACTCCGTCGCCTTTGACATGTACGGTATTTGCT CGACTTTTGCTATGGTACTGACACTTTTTCTGCGCTCTCCGCTCCTTTCT GTTTTTTTTTTTTCGTGTGTACGGCGAGCACAGCCACGGCTTCGCCTGGG AAGAGGGCTCGGACGTCGACACCCACATCACCCCCCTCTACCACTACGTC AGGAATGTCAACAACACCGATGACGGCGGGTACTACGGAAAGTGAGTAAA CTGTCTTGTTTTGAGAATATTTTTTCTGTGTCTTGTGTCTGTCCCTGCTG CCTGCCGTGCGTCAAGATCAAGCGAGGTACATTAGAGACGGTACTGTCGT AGCTGCCGAACCTGAGCATTTACGGTATGACGACGTTGCCAGCCGGACAT ATTTTGTTTTCTCGTGGCCCTGACTAGGCTGTGAACATCACAAGGCCGCA AGAGCAGAGCGTAGCGGGGGCTGCTGCTTTGAAATTTTCTTGTGATTGAA TCCGTGAGTCTCGCATTCGTCGCGGCTTTCGGGTCCTGACCGACATTCTT TCTGCCGGGATGGAGCCACGTGCCACCGTCTGGTCCCGCGAGCTAGTTCG TTTTAGCAGCATCTCCTTCGTACATACATACATACGTCAGCTGTACACTG CAAGCGCAGTGGTGAGCCTCGCTTTTTTGTTGCATCTCCTGCCTGCTATT TAACCCTGCACTTGTTTGTCTCGTTTGTATCTCCCTCTTCCCACTGCTTC GAACGCGACCCTTGGGGAACTTATCATCGCCCTGGCACGGCCTGGCGCGT TAGTGTGGTGGGTTCACCGCAATGCGGGTGCATCGAGGAGATGCCCATGG TGTCTCACGCCGCGTGCTCCAAGTAAGTGGCGCCGGTTTCGATGGACCCC CTTTCAGTGGGCGGCCTTCGTTTGTGTGTCATTGTTTTACCGGTAAATAC TTCGTATGCTTTTTCCGCACTATTTACTACTGTTCGCATCTATTCTTCGC TGAGGCACCATCATGCCTCTAATGTTCAAACCATATTGTTAACTCAGAAG TTTTGTATGAAATGTACTAAATACTAAATAACGTCTCCCCCCCCTCCTAC CCTTCGTGTTTTTGACCACCGCGCCCCCCAGGTTTGGGTGGGACGGGATC CAGCCCTGCTGGGACAACTCTCTCCGCAGCCAGTACAAGTACAACCTCGA GGAGCCTAACGGCGAGATGGAGACCAACCTGGTGAGGGAGTGCGACAACG AGGACGTGCCCGACTACGACTTCCGCATCTGCGAGCACAACACGTACATG TGCTGCTGGACGGAGAACGACGGCCAGGGGATGGCCGACAACACGGTGCG GTGTTGTGGTCGTCGTCGCCGTCGTCTTGCACCTATCTGCCTCTCCATGA AGATATTCGGTTTGTCTTGTGTTCCATCTGAGTTGGTCTGAAGGCTACGG GCCTCCGCGATCGTACGGTGTGGTGCCGTGTACCGCAGGAAGAGAGTCAT TTCCCCAAACCATTTGGCATTACATAAATAACGCATTGACGAGCAGAAAC AATTATCTCATCAAACAAATCCCCTGCCTGCCTGCCTGCCTGCCTGCCTG CCTGCCTTTTCTGCGTGCCTTTCTTTGCAGGACGTCTGCCGCGTAGGCAA GACGGAGTACCCCGGGGAGAGCGAGGGAGAGGTGCACTGCCACGGGTTCG TGTGGCCCGAGGACGCCAGCGACAAGTACATCCACCTCCTCGCCCAGTTC GTGCAGCACTACGACCACAAGGACAGGAGGGGCTACTTCGGAAAGTGAGT CTTGGGTGCAGGTGCCTATCGATGATTTCCAGCTCCATCACTTGTGTAGT CTATGTGTACATGATGGAGACTCTCGCCGCCTCTTGCTGGCCTTGAAAAT CAGTCGCTGCTGTAAGATACGTTTCTCCCTCCCTCCACTTGACCCTAATA AGACGTTTCACTCTCAACACCCTGCAACTGGCTAAAAACAACACTTTATC TCCTCCCCTCCCCCGCGCTGATATTATTTGGTCCTCAGCCTCCCGGATGC TCCGATGTGCGGCTGCATCGAGGACATGCCCGAGGTCTCGGAGGCGGACT GCACCACGTACGACAACGAGCCCGGCCGCGAGGGCAAGTTCACCGCGTGC ACCGACAACGACCTCCGCAGCTCTTTCGAGGAGTTCTACCGCGGTGCCGT GCTCCCCAACCTCGTGGAGGAGTGCGACAACGAGGAGGGCTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1540:12304..15646+

>mRNA_L-elsbetiae_contig1540.3815.1 ID=mRNA_L-elsbetiae_contig1540.3815.1|Name=mRNA_L-elsbetiae_contig1540.3815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2778bp|location=Sequence derived from alignment at L-elsbetiae_contig1540:12304..15646+ (Laminarionema elsbetiae ELsaHSoW15)
ATTTGCCAACCAACCCGCACGATAGCCAGCCGCGGCTCGCGCTGCCACCA
TCAACAAACAAAAATGAAGCTCGCCGCCCAAAATAACCGGACATTCTTGG
CGCTCTGCGCCGCACCGCTGCTGCTGGCCCTAGCCGCGTCCGCCTCCACC
TCCACCGACGACAACCCGGCGCCGTCCCCCGACTCGGCTGACGGCTCCGG
CGTCGCTGCCCCGACCCAGTACCCCAACCCGACCATCGGATACAAGGAGA
CACCCGCGCCCGCTGATACCGAGGAAGTGGTGACCGAGGAAGAAGAAGGG
ACGCCGGTGACGGAGGAAGAGGACAAGGAAGGAACTGTGACTTCCACGAT
GGGGGACGATGAAGGAACGACGTCCATGACGGGGGAGAAAGAAACGCCGA
TGGACACTCCTCCTGCGGATGGAGACATCTGCACCACCTACGACGAGGAC
GTAAGTATTTGCCAACCAACCCGCACGATAGCCAGCCGCGGCTCGCGCTG
CCACCATCAACAAACAAAAATGAAGCTCGCCGCCCAAAATAACCGGACAT
TCTTGGCGCTCTGCGCCGCACCGCTGCTGCTGGCCCTAGCCGCGTCCGCC
TCCACCTCCACCGACGACAACCCGGCGCCGTCCCCCGACTCGGCTGACGG
CTCCGGCGTCGCTGCCCCGACCCAGTACCCCAACCCGACCATCGGATACA
AGGAGACACCCGCGCCCGCTGATACCGAGGAAGTGGTGACCGAGGAAGAA
GAAGGGACGCCGGTGACGGAGGAAGAGGACAAGGAAGGAACTGTGACTTC
CACGATGGGGGACGATGAAGGAACGACGTCCATGACGGGGGAGAAAGAAA
CGCCGATGGACACTCCTCCTGCGGATGGAGACATCTGCACCACCTACGAC
GAGGACGTAAGTATCGCTAAACTCCTCGATGGCACCTGCGAGTGGAACAC
ATACATGTGCTGCTGGACCGGCCACGACGGGCAGGGGAGCTTTTACGGCA
ACGCCGACGTCTGCCGCGTGATGGACTACCCGAACGAGGGGGACGTCCTC
GAGATGCCCCGCGACGACGAGGGCCCCGTGTACTGATCGCTAAACTCCTC
GATGGCACCTGCGAGTGGAACACATACATGTGCTGCTGGACCGGCCACGA
CGGGCAGGGGAGCTTTTACGGCAACGCCGACGTCTGCCGCGTGATGGACT
ACCCGAACGAGGGGGACGTCCTCGAGATGCCCCGCGACGACGAGGGCCCC
GTGTACTGCCACGGCTTCGCCTGGGAAGAGGGCTCGGACGTCGACACCCA
CATCACCCCCCTCTACCACTACGTCAGGAATGTCAACAACACCGATGACG
GCGGGTACTACGGAAACCACGGCTTCGCCTGGGAAGAGGGCTCGGACGTC
GACACCCACATCACCCCCCTCTACCACTACGTCAGGAATGTCAACAACAC
CGATGACGGCGGGTACTACGGAAATGTGGTGGGTTCACCGCAATGCGGGT
GCATCGAGGAGATGCCCATGGTGTCTCACGCCGCGTGCTCCAATGTGGTG
GGTTCACCGCAATGCGGGTGCATCGAGGAGATGCCCATGGTGTCTCACGC
CGCGTGCTCCAAGTTTGGGTGGGACGGGATCCAGCCCTGCTGGGACAACT
CTCTCCGCAGCCAGTACAAGTACAACCTCGAGGAGCCTAACGGCGAGATG
GAGACCAACCTGGTGAGGGAGTGCGACAACGAGGACGTGCCCGACTACGA
CTTCCGCATCTGCGAGCACAACACGTACATGTGCTGCTGGACGGAGAACG
ACGGCCAGGGGATGGCCGACAACACGGTTTGGGTGGGACGGGATCCAGCC
CTGCTGGGACAACTCTCTCCGCAGCCAGTACAAGTACAACCTCGAGGAGC
CTAACGGCGAGATGGAGACCAACCTGGTGAGGGAGTGCGACAACGAGGAC
GTGCCCGACTACGACTTCCGCATCTGCGAGCACAACACGTACATGTGCTG
CTGGACGGAGAACGACGGCCAGGGGATGGCCGACAACACGGACGTCTGCC
GCGTAGGCAAGACGGAGTACCCCGGGGAGAGCGAGGGAGAGGTGCACTGC
CACGGGTTCGTGTGGCCCGAGGACGCCAGCGACAAGTACATCCACCTCCT
CGCCCAGTTCGTGCAGCACTACGACCACAAGGACAGGAGGGGCTACTTCG
GAAAGACGTCTGCCGCGTAGGCAAGACGGAGTACCCCGGGGAGAGCGAGG
GAGAGGTGCACTGCCACGGGTTCGTGTGGCCCGAGGACGCCAGCGACAAG
TACATCCACCTCCTCGCCCAGTTCGTGCAGCACTACGACCACAAGGACAG
GAGGGGCTACTTCGGAAACCTCCCGGATGCTCCGATGTGCGGCTGCATCG
AGGACATGCCCGAGGTCTCGGAGGCGGACTGCACCACGTACGACAACGAG
CCCGGCCGCGAGGGCAAGTTCACCGCGTGCACCGACAACGACCTCCGCAG
CTCTTTCGAGGAGTTCTACCGCGGTGCCGTGCTCCCCAACCTCGTGGAGG
AGTGCGACAACGAGGAGGGCTAACCTCCCGGATGCTCCGATGTGCGGCTG
CATCGAGGACATGCCCGAGGTCTCGGAGGCGGACTGCACCACGTACGACA
ACGAGCCCGGCCGCGAGGGCAAGTTCACCGCGTGCACCGACAACGACCTC
CGCAGCTCTTTCGAGGAGTTCTACCGCGGTGCCGTGCTCCCCAACCTCGT
GGAGGAGTGCGACAACGAGGAGGGCTAA
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