mRNA_L-elsbetiae_contig15382.3807.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI) HSP 1 Score: 221 bits (562), Expect = 4.570e-71 Identity = 111/127 (87.40%), Postives = 118/127 (92.91%), Query Frame = 1 Query: 1 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLARTGAQAAASTYV 381 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRA FL+FVG+L FSLN I ++AG LM++NA FNFYVIF YPEFERDLQRKDLESEGRDYLRANRGA+AQAGVEFARNNPDLAR GAQAAASTYV Sbjct: 95 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.020e-43 Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 1 Query: 1 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLARTGAQAAASTYV 381 AF+CILCCFETH+ +A A+NFGFLYNAKGRA FL+FVGIL FS ++GYI+GI MI ++ FNF+VI YPE + QRKDLES RD++R N+GAIA+ GV FA+NNP A A+ A ST+V Sbjct: 41 AFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTA-STFV 165
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH) HSP 1 Score: 121 bits (303), Expect = 2.940e-32 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQ-------AGVEFARNNPDLARTGAQA 363 FSC+LCCFETHLK V+K IA NFGF+Y+AK R+ F++F+G + FS + L G I G+ M+ NA FN + +F YP++E D+QRKD +SE +DYL +N Q A E R NP++AR G QA Sbjct: 27 FSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSFS-LFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQGTQA 151
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 7.760e-22 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 1 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLAR 348 AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FL+FVG+L FSL + G +AG MI NA FN V+ YP++ + E E +++ N G +A+ G L+R Sbjct: 124 AFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKGARGPHRRSSLSR 237
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A6U4HF89_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HF89_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.110e-19 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPE-FERDLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLARTGAQAAA 369 FS ++CCFETH K VA I NFGF+Y+A GR F++FVGIL +SL +IGYIAG LMI+NA FY+++ YP F +L+ + E+ G+ +A A NNP+ GA AAA Sbjct: 136 FSVLICCFETHFKQVALLIQDNFGFMYDATGRFFFMIFVGILCWSLG-IIGYIAGALMIVNACVGFYIMYKYPHVFTEELESFE-ETMGKHAAQA------------AANNPEAVAAGAGAAA 244
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A7S4EDS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDS9_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.420e-19 Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAI-AQAGVEFARNNPDLARTGAQAA 366 F+ ++CCFETHL V++ I NFGFLYN KGR F + V L FS+ LIG I+G+ +++ AA+N YVI+ +P++ER++ D+E G + G++ A G ++ L GA AA Sbjct: 127 FALLICCFETHLAQVSRIIGENFGFLYNVKGRVTFFILVSFLCFSIG-LIGLISGVGLLVAAAYNAYVIYKHPDYEREMLENDVEQRGPSSVYGVAGSVVAPPGASSGGDSSWLEGAGAAAA 247
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: F0WMR8_9STRA (Uncharacterized protein AlNc14C160G7754 n=2 Tax=Albugo TaxID=65356 RepID=F0WMR8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 8.150e-14 Identity = 47/126 (37.30%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLARTGAQAAASTYV 381 F + FE L + I ANFGFLY KGRAAF+ F+G L F ++ +GY+AGILM MNA N V+ +PEF+ + + G Y + A + F +NP A +Q A S+ + Sbjct: 84 FGFLFLLFECRLSRMETPIRANFGFLYTYKGRAAFIFFIGFLDFGMSSALGYLAGILMCMNAFVNMLVMCRHPEFKATMSANADPTTG--YTTGQQEAAS-----FMSSNPSFANKASQFAVSSVM 202
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A067BXY9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXY9_SAPPC) HSP 1 Score: 74.3 bits (181), Expect = 9.050e-14 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFER-DLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLA 345 F + FE L KT+ NFGFLY+ KGRA F+ F+G + F ++ +GYIAGI+M +NA NFY + +PEF+ +L + G Y A++ A F NNP++A Sbjct: 83 FGVLFLLFECRLSRFEKTLRTNFGFLYSYKGRAFFIFFIGFMDFGTDDGLGYIAGIIMCINAFLNFYAMMRHPEFKNGNLSSSSDPTVG--YAAAHKEA-----QNFISNNPNIA 190
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A1V9YX65_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX65_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.270e-13 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 4 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFER-DLQRKDLESEGRDYLRANRGAIAQAGVEFARNNPDLAR 348 F + FE + + +I NFGFLY+ KGRA+F+ F+G L F + +GYIAGI+M +NA NFYV+ +PEF +L + G Y A++ A F NNPD+A+ Sbjct: 84 FGVLFLLFECRISRLDPSIRKNFGFLYSYKGRASFIFFIGFLDFGTDAGLGYIAGIIMCINAFLNFYVMMRHPEFASGNLSATSDPTAG--YTAAHQEA-----QNFLTNNPDIAK 192
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.700e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 43 VVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELIGYIAGILMIMNAAFNFYVIFTYPEFERDLQRKDLESEGRDYLRANRGAIAQAG 312 +VAK IA NFGFLY+AK RA FL+FVG+L FSL + G +AG MI NA FN V+ YP++ + E E +++ N G + G Sbjct: 123 LVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARKVG 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15382.3807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15382.3807.1 >prot_L-elsbetiae_contig15382.3807.1 ID=prot_L-elsbetiae_contig15382.3807.1|Name=mRNA_L-elsbetiae_contig15382.3807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAAFLVFVGILAFSLNELback to top mRNA from alignment at L-elsbetiae_contig15382:136..3143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15382.3807.1 ID=mRNA_L-elsbetiae_contig15382.3807.1|Name=mRNA_L-elsbetiae_contig15382.3807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3008bp|location=Sequence derived from alignment at L-elsbetiae_contig15382:136..3143+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15382:136..3143+ >mRNA_L-elsbetiae_contig15382.3807.1 ID=mRNA_L-elsbetiae_contig15382.3807.1|Name=mRNA_L-elsbetiae_contig15382.3807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig15382:136..3143+ (Laminarionema elsbetiae ELsaHSoW15)back to top |