mRNA_L-elsbetiae_contig1535.3789.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 334 bits (857), Expect = 1.320e-106 Identity = 190/320 (59.38%), Postives = 235/320 (73.44%), Query Frame = 1 Query: 166 MSASLLDKQLHIHVRKGDVRGVEKTLQLGACIDGFDAHRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQE 1125 MS SL DKQL + V KG+ RGVE+ L LGA +DGFD +PL AA GRA V+ +LA RGA+LEA+ P DVRD G +V+S GS A+HAAVYAR D++ AL AGA+PNAADATGHTPLMQACR +R +VRELL GADPA QSD+GM+ALH+A+ RD DVI LL+ + ATL+Q TGY GTPLCCAAS G++++V CL+S GASD ALWS+KGASAL+GAVQEGR+ +V ILL +D VGG AV KAI TA RK A++LHMLLA A GE+ + WA +++ LL A GSL+V++ +L AGA E Sbjct: 1 MSTSL-DKQLLVEVLKGNERGVEEQLDLGASLDGFDIWKPLFAAARHGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLD-HGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVA-GEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADE 317
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.590e-50 Identity = 160/412 (38.83%), Postives = 225/412 (54.61%), Query Frame = 1 Query: 184 DKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQEN-EGGPGNRPSE----CIRFTGRINPPQEAAIVRMLRRGPAYRARPRAWPTGAGASGRA---------AKPPLDVRIFWPQGRRFFATRFNRYTNK 1371 D++L + V KG++ GV+K L GA +DG + P+ AA G A ++ +L ++GADLE E RF GSRAIHAA+ P A+ L AGA+ N+ D G TPLM + DT +A REL GA P +++ DGM A+H AA +V+ +++ + L+ TP+ AA G +AV L+S GASD L ++ +A++ A G +V ++L I+ VGG A+ +I AV+ R+A++L ML++ AEGE+ + WA R D L AA S+ ++VLL AGA+E G G SE +R R +P +EAA+VRML+RGPAYRAR WPT G +G + V+IF P G RFFATRF RY NK Sbjct: 8 DRRLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLET---------EARF--PAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALA-DTGALLA--RELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAILWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVS-AEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARYANK 401
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 174 bits (442), Expect = 3.410e-43 Identity = 137/376 (36.44%), Postives = 201/376 (53.46%), Query Frame = 1 Query: 181 LDKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDT---KERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAV--RKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPS-ECIRFTG---RINPPQEAAIVRMLRRGPAYRARPRAWPTGAGA 1275 L QL ++R+ + GVE+TL GA +DG RP+ AA+ + + +L R AD++ D+R +G V +G RA+H A+ D L AGA+P++A+ G TPLM C D+ ++R M RE AL FAA RD ++I++L+++ TL+++T TPL AA +G KAVS L+S GA +EK L+ AV+E + VV +LL + +GGA + +A+ A RK A ++ MLL+ AEG +++ WAR R + P+L A G+++ VLL AGA E RP+ E + F + +P ++ AIVRML RGPAYRAR AWP A A Sbjct: 110 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLS-AEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARA 484
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.480e-42 Identity = 136/376 (36.17%), Postives = 200/376 (53.19%), Query Frame = 1 Query: 181 LDKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDT---KERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAV--RKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPS-ECIRFTG---RINPPQEAAIVRMLRRGPAYRARPRAWPTGAGA 1275 L QL ++R+ + GVE+TL GA +DG RP+ AA+ G + +L R A+++ D+R +G V +G RA+H A+ D L AGA+P++A+ G TPLM C D+ ++R M RE AL FAA RD D+I++L+++ TL+++T TPL AA +G KAVS L+S GA +EK L+ AV+E + VV +LL ++ + G + +A+ A RK A ++ MLL+ AEG +++ WAR R + P+L A G+++ VLL AGA E RP+ E + F + +P ++ AIVRML RGPAYRAR AWP A A Sbjct: 118 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLS-AEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARA 492
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME6_ECTSI) HSP 1 Score: 164 bits (414), Expect = 8.650e-41 Identity = 148/425 (34.82%), Postives = 215/425 (50.59%), Query Frame = 1 Query: 184 DKQLHIHVRKGDVRGVEKTLQLGACIDGFD--AHRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAV-YARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGA-DSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQ------RSSDT----PLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPSECIRFTGRINPPQE------AAIVRMLRRGPAYRARPRAWPTGAGAS---------GRAAKPPLDVRIFWPQGRRFFATRFNRYTNK 1371 DK+L V+ G+++GV++ L GA ++G + RPL AA +G + L +GA+LE +V + G ++ GS A+HAAV + I L GANP+A D G T L AC LD ER+AMVRELL GA ++ G HFAA + ++ELL+ A ++ GTP+ AAS G +KAVS L+S GASD A+ S + S L A+ G VV +LL + +++ GG + A+ A+++ + L +L++ + W+ Q R SD P L A + +LL AGA E ++P++ + G + ++ A IVR+LRR PA+RAR WP GA A+ G A PL +IFWP GR FF RF +Y K Sbjct: 4 DKRLLQEVQNGNLKGVDEALAAGANVNGSSRLSCRPLICAARWGNCKIAKRLIEKGANLELAVTDETGFGGISPLYPVGSNALHAAVSFGVEVGMIRVLLDGGANPDAQDIDGCTALANACSVLDPDERLAMVRELLRGGATAFSKTFKGTSPAHFAASKGDCRLLELLLSEAPAMINHVNDDFGTPMAFAASTGQDKAVSFLVSAGASDEAVLSHERGS-LFMALCRGFTNVVRVLLSSPEALKAAGGYDEIRHAMCWAMQQGQPESLRLLISVGGKTR---YWSNQLVLVPGRLSDNQVEVPALQCAVCYQCVESTKLLLEAGADERFL-TNHKPADLLGAVGLLLDAEDRDLQKAAEIVRVLRRAPAFRARSWRWP-GATATPPVDAGSDPGDDAATPLGAQIFWPAGRNFFTKRFEKYAKK 422
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.540e-39 Identity = 143/370 (38.65%), Postives = 198/370 (53.51%), Query Frame = 1 Query: 307 GRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQE---NEGGP--GNRPSECIRFTGRINPPQEAAIVRMLRRGPAYRARPRAWPTGAGASG----------RAAKPPLDVRIFWPQGRRFFATRFNRYTNK 1371 G ++ +L ++GA+LE E RF GSRAIHAA+ P A+ L AGA+ N+ D G TPLM + DT +A REL GA P +++ DGM A+H AA +V+ +++ + L+ TP+ AA G +AV L+S GASD L ++ +A+ A G +V ++L I+ VGG A+ +I AV+ R+A++L ML++ AEGE + WA R D L AA S+ V++VLL AGA+E N G G + R +P +EAA+VRML+RGPAYRAR WPT G +G R AK V+I+ P G RFFATRF RY NK Sbjct: 106 GNTAMLKLLISKGANLET---------EARF--PAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALA-DTGALLA--RELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVS-AEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKS-FGVQIYRPTGTRFFATRFARYANK 456
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI) HSP 1 Score: 125 bits (313), Expect = 6.640e-28 Identity = 118/321 (36.76%), Postives = 164/321 (51.09%), Query Frame = 1 Query: 241 LQLGACIDGF-DAH-RPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGR----FVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLD-TKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQR----SSDT-----------------PLLSQAAEAGSLAVVNVLLRAGA 1119 L+ GA + F DA RP+ VA +G D+I L A GAD EA D +DG + + + G A++ A A+ L GANPNA D+ G TP+M C + T ++ M+R LL AGAD A++++ G +A+H AA R A V+ LL+ +TL+ +T TPL AA G E +S L S GASD W+ G +AL AV G V LL + +D VGG +++AIR +V L MLL GEK+QE WA+ D+ P+L AA+ S+ ++VLL AGA Sbjct: 2 LEEGASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSD-KDGAWKGNPEWSYRNGFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCGTGSVTSTKLTMMRSLLKAGADLAVENELGGLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGASDSLPWATTGITALHKAVIVGMGTSVRFLL-ENGLDAVGGLPGIAEAIRISVWFGCIDGLEMLL-NVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGA 319
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI) HSP 1 Score: 110 bits (275), Expect = 3.980e-23 Identity = 83/213 (38.97%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 409 RGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSD 1047 +G + AAV R A+ + AGA+PN D G L AC D + R+ +VRELL GA+P L+ ALH AA ++ L+ ATL+ TPL A S G KAV+CL+SLGASDR ++ E + +L AV G + ++S+LLG ++ VGG ++ A+ AV K R L++LL+ EGE+++ WAR R SD Sbjct: 15 KGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGVGCNALQVACFDGDDERRLCIVRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLG-KGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSV-EGEERRTFWARTRVSD 225
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LMB0_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB0_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.490e-15 Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 523 LMQACRSLDTKERIAMVRELL---TAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGG 918 +M ACR L + + E+L AGADPAL+ +DG +A+HFAA R V++LL+ + +TL+ +T + TPL AA G E + L+S GASD + + KG +A GAV+ G+ V LL + +D VGG Sbjct: 1 MMIACRRLGSVMSTPTLLEILHALLAGADPALEDEDGGLAIHFAAARCDTQVVQLLLSKAPSTLNHATHFGWTPLAAAADGGRESTMCLLLSAGASDSLVRATKGVTAFHGAVRSGKIRSVRFLL-ENGLDAVGG 134
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME9_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 2.600e-10 Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 292 VAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKER 561 VAA G+ + L ARGA L++ DV EG + GS+AIHAAV+ P ++ L GANPNAAD G TPLM AC TK+R Sbjct: 2 VAAGLGKVSFVEFLVARGAGLDSRTCRDVPRPEGGIILRMGSQAIHAAVHGGSPGVLYVLLRLGANPNAADDDGETPLMIACGD-STKDR 90 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1535.3789.1 >prot_L-elsbetiae_contig1535.3789.1 ID=prot_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp MSASLLDKQLHIHVRKGDVRGVEKTLQLGACIDGFDAHRPLHVAASFGRAback to top mRNA from alignment at L-elsbetiae_contig1535:8036..10511- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1535.3789.1 ID=mRNA_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2476bp|location=Sequence derived from alignment at L-elsbetiae_contig1535:8036..10511- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1535:8036..10511- >mRNA_L-elsbetiae_contig1535.3789.1 ID=mRNA_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig1535:8036..10511- (Laminarionema elsbetiae ELsaHSoW15)back to top |