mRNA_L-elsbetiae_contig1535.3789.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1535.3789.1
Unique NamemRNA_L-elsbetiae_contig1535.3789.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.320e-106
Identity = 190/320 (59.38%), Postives = 235/320 (73.44%), Query Frame = 1
Query:  166 MSASLLDKQLHIHVRKGDVRGVEKTLQLGACIDGFDAHRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQE 1125
            MS SL DKQL + V KG+ RGVE+ L LGA +DGFD  +PL  AA  GRA V+ +LA RGA+LEA+ P DVRD  G +V+S GS A+HAAVYAR  D++ AL  AGA+PNAADATGHTPLMQACR     +R  +VRELL  GADPA QSD+GM+ALH+A+ RD  DVI LL+ +  ATL+Q TGY GTPLCCAAS G++++V CL+S GASD ALWS+KGASAL+GAVQEGR+ +V ILL    +D VGG  AV KAI TA RK  A++LHMLLA A GE+ +  WA    +++ LL  A   GSL+V++ +L AGA E
Sbjct:    1 MSTSL-DKQLLVEVLKGNERGVEEQLDLGASLDGFDIWKPLFAAARHGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLD-HGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVA-GEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADE 317          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.590e-50
Identity = 160/412 (38.83%), Postives = 225/412 (54.61%), Query Frame = 1
Query:  184 DKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQEN-EGGPGNRPSE----CIRFTGRINPPQEAAIVRMLRRGPAYRARPRAWPTGAGASGRA---------AKPPLDVRIFWPQGRRFFATRFNRYTNK 1371
            D++L + V KG++ GV+K L  GA +DG     + P+  AA  G A ++ +L ++GADLE          E RF    GSRAIHAA+    P A+  L  AGA+ N+ D  G TPLM    + DT   +A  REL   GA P +++ DGM A+H AA     +V+ +++    + L+       TP+  AA  G  +AV  L+S GASD  L  ++  +A++ A   G   +V ++L    I+ VGG  A+  +I  AV+ R+A++L ML++ AEGE+ +  WA  R  D   L  AA   S+  ++VLL AGA+E    G G   SE     +R   R +P +EAA+VRML+RGPAYRAR   WPT  G +G +               V+IF P G RFFATRF RY NK
Sbjct:    8 DRRLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLET---------EARF--PAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALA-DTGALLA--RELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAILWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVS-AEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARYANK 401          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 3.410e-43
Identity = 137/376 (36.44%), Postives = 201/376 (53.46%), Query Frame = 1
Query:  181 LDKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDT---KERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAV--RKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPS-ECIRFTG---RINPPQEAAIVRMLRRGPAYRARPRAWPTGAGA 1275
            L  QL  ++R+ +  GVE+TL  GA +DG      RP+  AA+  +  +  +L  R AD++     D+R  +G  V  +G RA+H A+     D    L  AGA+P++A+  G TPLM  C   D+   ++R  M RE                 AL FAA RD  ++I++L+++   TL+++T    TPL  AA +G  KAVS L+S GA      +EK    L+ AV+E  + VV +LL    +  +GGA  + +A+  A   RK  A ++ MLL+ AEG +++  WAR R  + P+L  A   G+++   VLL AGA E       RP+ E + F     + +P ++ AIVRML RGPAYRAR  AWP  A A
Sbjct:  110 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLS-AEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARA 484          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 4.480e-42
Identity = 136/376 (36.17%), Postives = 200/376 (53.19%), Query Frame = 1
Query:  181 LDKQLHIHVRKGDVRGVEKTLQLGACIDGFDA--HRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDT---KERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAV--RKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPS-ECIRFTG---RINPPQEAAIVRMLRRGPAYRARPRAWPTGAGA 1275
            L  QL  ++R+ +  GVE+TL  GA +DG      RP+  AA+ G   +  +L  R A+++     D+R  +G  V  +G RA+H A+     D    L  AGA+P++A+  G TPLM  C   D+   ++R  M RE                 AL FAA RD  D+I++L+++   TL+++T    TPL  AA +G  KAVS L+S GA      +EK    L+ AV+E  + VV +LL    ++ + G   + +A+  A   RK  A ++ MLL+ AEG +++  WAR R  + P+L  A   G+++   VLL AGA E       RP+ E + F     + +P ++ AIVRML RGPAYRAR  AWP  A A
Sbjct:  118 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLS-AEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARA 492          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME6_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 8.650e-41
Identity = 148/425 (34.82%), Postives = 215/425 (50.59%), Query Frame = 1
Query:  184 DKQLHIHVRKGDVRGVEKTLQLGACIDGFD--AHRPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAV-YARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGA-DSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQ------RSSDT----PLLSQAAEAGSLAVVNVLLRAGAQENEGGPGNRPSECIRFTGRINPPQE------AAIVRMLRRGPAYRARPRAWPTGAGAS---------GRAAKPPLDVRIFWPQGRRFFATRFNRYTNK 1371
            DK+L   V+ G+++GV++ L  GA ++G    + RPL  AA +G   +   L  +GA+LE +V  +   G    ++  GS A+HAAV +      I  L   GANP+A D  G T L  AC  LD  ER+AMVRELL  GA    ++  G    HFAA +    ++ELL+    A ++      GTP+  AAS G +KAVS L+S GASD A+ S +  S L  A+  G   VV +LL + +++   GG   +  A+  A+++ +   L +L++     +    W+ Q      R SD     P L  A     +    +LL AGA E      ++P++ +   G +   ++      A IVR+LRR PA+RAR   WP GA A+         G  A  PL  +IFWP GR FF  RF +Y  K
Sbjct:    4 DKRLLQEVQNGNLKGVDEALAAGANVNGSSRLSCRPLICAARWGNCKIAKRLIEKGANLELAVTDETGFGGISPLYPVGSNALHAAVSFGVEVGMIRVLLDGGANPDAQDIDGCTALANACSVLDPDERLAMVRELLRGGATAFSKTFKGTSPAHFAASKGDCRLLELLLSEAPAMINHVNDDFGTPMAFAASTGQDKAVSFLVSAGASDEAVLSHERGS-LFMALCRGFTNVVRVLLSSPEALKAAGGYDEIRHAMCWAMQQGQPESLRLLISVGGKTR---YWSNQLVLVPGRLSDNQVEVPALQCAVCYQCVESTKLLLEAGADERFL-TNHKPADLLGAVGLLLDAEDRDLQKAAEIVRVLRRAPAFRARSWRWP-GATATPPVDAGSDPGDDAATPLGAQIFWPAGRNFFTKRFEKYAKK 422          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.540e-39
Identity = 143/370 (38.65%), Postives = 198/370 (53.51%), Query Frame = 1
Query:  307 GRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQAAEAGSLAVVNVLLRAGAQE---NEGGP--GNRPSECIRFTGRINPPQEAAIVRMLRRGPAYRARPRAWPTGAGASG----------RAAKPPLDVRIFWPQGRRFFATRFNRYTNK 1371
            G   ++ +L ++GA+LE          E RF    GSRAIHAA+    P A+  L  AGA+ N+ D  G TPLM    + DT   +A  REL   GA P +++ DGM A+H AA     +V+ +++    + L+       TP+  AA  G  +AV  L+S GASD  L  ++  +A+  A   G   +V ++L    I+ VGG  A+  +I  AV+ R+A++L ML++ AEGE  +  WA  R  D   L  AA   S+ V++VLL AGA+E   N  G   G      +    R +P +EAA+VRML+RGPAYRAR   WPT  G +G          R AK    V+I+ P G RFFATRF RY NK
Sbjct:  106 GNTAMLKLLISKGANLET---------EARF--PAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALA-DTGALLA--RELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVS-AEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKS-FGVQIYRPTGTRFFATRFARYANK 456          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 6.640e-28
Identity = 118/321 (36.76%), Postives = 164/321 (51.09%), Query Frame = 1
Query:  241 LQLGACIDGF-DAH-RPLHVAASFGRADVIAVLAARGADLEASVPGDVRDGEGR----FVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLD-TKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQR----SSDT-----------------PLLSQAAEAGSLAVVNVLLRAGA 1119
            L+ GA +  F DA  RP+ VA  +G  D+I  L A GAD EA    D +DG  +    + +  G  A++ A       A+  L   GANPNA D+ G TP+M  C +   T  ++ M+R LL AGAD A++++ G +A+H AA R  A V+ LL+    +TL+ +T    TPL  AA  G E  +S L S GASD   W+  G +AL  AV  G    V  LL  + +D VGG   +++AIR +V       L MLL    GEK+QE WA+        D+                 P+L  AA+  S+  ++VLL AGA
Sbjct:    2 LEEGASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSD-KDGAWKGNPEWSYRNGFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCGTGSVTSTKLTMMRSLLKAGADLAVENELGGLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGASDSLPWATTGITALHKAVIVGMGTSVRFLL-ENGLDAVGGLPGIAEAIRISVWFGCIDGLEMLL-NVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGA 319          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 3.980e-23
Identity = 83/213 (38.97%), Postives = 118/213 (55.40%), Query Frame = 1
Query:  409 RGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGGAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSD 1047
            +G   + AAV  R   A+  +  AGA+PN  D  G   L  AC   D + R+ +VRELL  GA+P L+      ALH AA     ++   L+    ATL+       TPL  A S G  KAV+CL+SLGASDR ++ E  + +L  AV  G + ++S+LLG   ++ VGG  ++  A+  AV K   R L++LL+  EGE+++  WAR R SD
Sbjct:   15 KGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGVGCNALQVACFDGDDERRLCIVRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLG-KGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSV-EGEERRTFWARTRVSD 225          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LMB0_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB0_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.490e-15
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  523 LMQACRSLDTKERIAMVRELL---TAGADPALQSDDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFEKAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVGG 918
            +M ACR L +      + E+L    AGADPAL+ +DG +A+HFAA R    V++LL+ +  +TL+ +T +  TPL  AA  G E  +  L+S GASD  + + KG +A  GAV+ G+   V  LL  + +D VGG
Sbjct:    1 MMIACRRLGSVMSTPTLLEILHALLAGADPALEDEDGGLAIHFAAARCDTQVVQLLLSKAPSTLNHATHFGWTPLAAAADGGRESTMCLLLSAGASDSLVRATKGVTAFHGAVRSGKIRSVRFLL-ENGLDAVGG 134          
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Match: D8LME9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME9_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.600e-10
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  292 VAASFGRADVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIHALTAAGANPNAADATGHTPLMQACRSLDTKER 561
            VAA  G+   +  L ARGA L++    DV   EG  +   GS+AIHAAV+   P  ++ L   GANPNAAD  G TPLM AC    TK+R
Sbjct:    2 VAAGLGKVSFVEFLVARGAGLDSRTCRDVPRPEGGIILRMGSQAIHAAVHGGSPGVLYVLLRLGANPNAADDDGETPLMIACGD-STKDR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1535.3789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JAW5_9PHAE1.320e-10659.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK53_9PHAE1.590e-5038.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK8_ECTSI3.410e-4336.44Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE4.480e-4236.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LME6_ECTSI8.650e-4134.82Inversin protein alternative isoform n=1 Tax=Ectoc... [more]
D7G4M4_ECTSI1.540e-3938.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMA9_ECTSI6.640e-2836.76Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LME7_ECTSI3.980e-2338.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMB0_ECTSI1.490e-1540.74Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LME9_ECTSI2.600e-1046.67Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1535contigL-elsbetiae_contig1535:8036..10511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.7
Seed ortholog evalue4.4e-47
Seed eggNOG ortholog2880.D8LDZ2
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons2
Model size1947
Cds size1257
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1535.3789.1prot_L-elsbetiae_contig1535.3789.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1535 8561..10346 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815625.5430784-UTR-L-elsbetiae_contig1535:8035..85601622815625.5430784-UTR-L-elsbetiae_contig1535:8035..8560Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1535 8036..8560 -
1691682998.874588-UTR-L-elsbetiae_contig1535:8035..85601691682998.874588-UTR-L-elsbetiae_contig1535:8035..8560Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1535 8036..8560 -
1622815625.5785675-UTR-L-elsbetiae_contig1535:10346..105111622815625.5785675-UTR-L-elsbetiae_contig1535:10346..10511Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1535 10347..10511 -
1691682998.9009576-UTR-L-elsbetiae_contig1535:10346..105111691682998.9009576-UTR-L-elsbetiae_contig1535:10346..10511Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1535 10347..10511 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815625.5550585-CDS-L-elsbetiae_contig1535:8560..86241622815625.5550585-CDS-L-elsbetiae_contig1535:8560..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1535 8561..8624 -
1691682998.8861802-CDS-L-elsbetiae_contig1535:8560..86241691682998.8861802-CDS-L-elsbetiae_contig1535:8560..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1535 8561..8624 -
1622815625.56881-CDS-L-elsbetiae_contig1535:9153..103461622815625.56881-CDS-L-elsbetiae_contig1535:9153..10346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1535 9154..10346 -
1691682998.8935225-CDS-L-elsbetiae_contig1535:9153..103461691682998.8935225-CDS-L-elsbetiae_contig1535:9153..10346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1535 9154..10346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1535.3789.1

>prot_L-elsbetiae_contig1535.3789.1 ID=prot_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp
MSASLLDKQLHIHVRKGDVRGVEKTLQLGACIDGFDAHRPLHVAASFGRA
DVIAVLAARGADLEASVPGDVRDGEGRFVFSRGSRAIHAAVYARMPDAIH
ALTAAGANPNAADATGHTPLMQACRSLDTKERIAMVRELLTAGADPALQS
DDGMVALHFAALRDGADVIELLVRRQRATLDQSTGYAGTPLCCAASAGFE
KAVSCLMSLGASDRALWSEKGASALIGAVQEGREGVVSILLGADSIDTVG
GAAAVSKAIRTAVRKREARMLHMLLATAEGEKQQELWARQRSSDTPLLSQ
AAEAGSLAVVNVLLRAGAQENEGGPGNRPSECIRFTGRINPPQEAAIVRM
LRRGPAYRARPRAWPTGAGASGRAAKPPLDVRIFWPQGRRFFATRFNRYT
NKCAEGGGILLVGRGSLV*
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mRNA from alignment at L-elsbetiae_contig1535:8036..10511-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1535.3789.1 ID=mRNA_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2476bp|location=Sequence derived from alignment at L-elsbetiae_contig1535:8036..10511- (Laminarionema elsbetiae ELsaHSoW15)
TGGCGATCTTCGCTGGCTGCTGGCTGCTGGTTGGGTAGTGCGCCGTCTCT CGTTCTCCTGGTACATACTTCTTCACCATCTTCACACCTCCCCTTCTGGA TTCCTTTCACGTGGCTCTTGCACCCGACAGCCAAAGAGCGGTTTGTCCGT GAGCAACCATTTTTCATGTCTGCCTCCTTGCTGGACAAGCAGCTTCACAT TCACGTCCGGAAAGGAGATGTGAGGGGGGTAGAGAAGACGCTTCAACTCG GAGCTTGCATTGATGGGTTCGACGCGCATAGGCCGCTCCACGTGGCGGCC AGTTTCGGGCGTGCAGATGTCATCGCGGTGCTCGCGGCGAGAGGCGCGGA CCTTGAAGCCTCCGTCCCAGGCGACGTGCGCGACGGCGAGGGGCGCTTCG TTTTCTCGAGAGGCTCGCGGGCGATCCACGCCGCCGTCTACGCTAGAATG CCCGACGCCATCCACGCCCTGACGGCGGCGGGAGCGAACCCGAACGCGGC GGACGCGACCGGCCACACCCCGCTGATGCAGGCTTGCCGGTCGCTCGACA CGAAGGAACGCATCGCCATGGTGCGAGAGCTGCTGACCGCCGGCGCCGAT CCGGCGCTGCAGAGCGACGACGGCATGGTCGCCCTGCACTTCGCGGCCCT CAGGGACGGTGCCGACGTAATCGAGTTGCTCGTGCGCAGACAACGGGCGA CACTCGACCAGTCGACCGGGTACGCGGGAACGCCGCTGTGTTGCGCCGCC TCTGCCGGGTTCGAGAAGGCGGTTTCGTGCTTGATGTCGCTCGGGGCGAG CGACAGGGCGCTGTGGTCGGAGAAGGGCGCGAGCGCTCTCATCGGGGCCG TGCAAGAAGGCCGGGAGGGCGTGGTGAGCATCCTTCTCGGTGCGGACAGC ATCGACACCGTGGGAGGCGCGGCCGCGGTCTCCAAAGCGATCCGCACGGC CGTCCGCAAGAGGGAGGCGAGAATGCTCCACATGCTGCTCGCCACCGCGG AGGGGGAGAAGCAACAAGAGCTCTGGGCACGGCAGCGTTCGAGCGATACG CCTTTGCTCAGTCAGGCCGCCGAGGCCGGCTCTCTCGCCGTGGTCAATGT CCTGCTGCGCGCCGGGGCCCAGGAGAACGAAGGGGGCCCCGGAAATCGTC CCAGCGAATGCATCCGCTTCACCGGCAGGATTAATCCGCCGCAGGAGGCG GCCATAGTTAGAATGCTGCGCCGGGGACCAGCATACCGTGCTCGGCCAAG GGCGTGGCCGACAGGGGCAGGCGCCAGTGGTCGAGCGGCGAAGCCCCCGC TTGATGTGCGCATTTTTTGGCCGCAGGGCCGCAGGTTCTTCGCAACACGT TTCAACAGGTAGGGGGGGGGGGGGGGGGGGTGGTAAAAAAGCACAAGGGT GTGGGNNNNNNNNNNATTTGGTGTGGGGGCGGGGAGGAGGGCCGTTCCAG ATACAATTAAAAGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGCATGTAAT ACAGACAACGTGTGTGTGTGCCTCGATCTTCCGAGAGAAGATGATTTGTG GCACGCAGTTATTTAGCTGATTGGTAAAAAAAAACTGTGGCGGAATTCCA AGTTCAGGGACGACCGAAGATGCTTGGAGGACGGGTGGCGTCACCCACGG TCGAATCACTCCTTGAAATGATTTGGTGATGTGAAGCATCTGTGCTCTTG TGCGCTGCAAAGCTCGATGTGTGCCAACCGTTGACCCTGCCTGCGTTGGG TGCGCAGCTCTTTGACGCCGCCGTCCGTGCGTGTACACAGGACGAGGGCT GCCTTTTGGTTCGTGCGATAAGCGTCTCGTGTGTTGCACGTGTTTTTTTG TCGCCTTATACTTTTGTTTGCTTTTGTCCTGTTTCAGGTACACCAACAAA TGCGCGGAAGGGGGCGGCATTCTCCTTGTAGGCCGCGGAAGCCTTGTGTG AGGCCGAGGAAGCTGGAACTCGTGTGTGTTACGGGCGGAAGCGCGGCAGT GCAATGGGGAACAAACAGCTGGCATGGCTCGGGACGGACAAGAAGGGCTA CACGCCAACTGTCTCTAACCGGCCTAAAACGGCAGAGGGGGCACCGTCGG TGACACGATGCCGCCCGCTAGATGAGAGGCAGTACCAAGCCGGCCTGGGA GGAGCGGCTGGGTGGCGTTGAACGTGCTGATATATTACAGGATGTGGCTT TGCTTGTGTTCCTAGGTCTTGCGCCGCGGGGCGATTCGATTCGATTCGGC CGCCACTGTAGCCACACGTTCGAGCCTTGCCGAGCGGTACAGTAAATAAA GCAGAAGCAGTGATGACTACCTCCCTCTTTCTCCACCTTTTACTAGTTTC TCTCTTCGACATACGTCTGTAGGACAAAACTACTGTAGAATTTCCAACGC AGGGGATCCGATGGAGGGCTCGGTTGGTGCAAGTGATGATGATCGACCTG AAGACGCTAGAACCCATAGTGCGAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1535:8036..10511-

>mRNA_L-elsbetiae_contig1535.3789.1 ID=mRNA_L-elsbetiae_contig1535.3789.1|Name=mRNA_L-elsbetiae_contig1535.3789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig1535:8036..10511- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGCCTCCTTGCTGGACAAGCAGCTTCACATTCACGTCCGGAAAGG
AGATGTGAGGGGGGTAGAGAAGACGCTTCAACTCGGAGCTTGCATTGATG
GGTTCGACGCGCATAGGCCGCTCCACGTGGCGGCCAGTTTCGGGCGTGCA
GATGTCATCGCGGTGCTCGCGGCGAGAGGCGCGGACCTTGAAGCCTCCGT
CCCAGGCGACGTGCGCGACGGCGAGGGGCGCTTCGTTTTCTCGAGAGGCT
CGCGGGCGATCCACGCCGCCGTCTACGCTAGAATGCCCGACGCCATCCAC
GCCCTGACGGCGGCGGGAGCGAACCCGAACGCGGCGGACGCGACCGGCCA
CACCCCGCTGATGCAGGCTTGCCGGTCGCTCGACACGAAGGAACGCATCG
CCATGGTGCGAGAGCTGCTGACCGCCGGCGCCGATCCGGCGCTGCAGAGC
GACGACGGCATGGTCGCCCTGCACTTCGCGGCCCTCAGGGACGGTGCCGA
CGTAATCGAGTTGCTCGTGCGCAGACAACGGGCGACACTCGACCAGTCGA
CCGGGTACGCGGGAACGCCGCTGTGTTGCGCCGCCTCTGCCGGGTTCGAG
AAGGCGGTTTCGTGCTTGATGTCGCTCGGGGCGAGCGACAGGGCGCTGTG
GTCGGAGAAGGGCGCGAGCGCTCTCATCGGGGCCGTGCAAGAAGGCCGGG
AGGGCGTGGTGAGCATCCTTCTCGGTGCGGACAGCATCGACACCGTGGGA
GGCGCGGCCGCGGTCTCCAAAGCGATCCGCACGGCCGTCCGCAAGAGGGA
GGCGAGAATGCTCCACATGCTGCTCGCCACCGCGGAGGGGGAGAAGCAAC
AAGAGCTCTGGGCACGGCAGCGTTCGAGCGATACGCCTTTGCTCAGTCAG
GCCGCCGAGGCCGGCTCTCTCGCCGTGGTCAATGTCCTGCTGCGCGCCGG
GGCCCAGGAGAACGAAGGGGGCCCCGGAAATCGTCCCAGCGAATGCATCC
GCTTCACCGGCAGGATTAATCCGCCGCAGGAGGCGGCCATAGTTAGAATG
CTGCGCCGGGGACCAGCATACCGTGCTCGGCCAAGGGCGTGGCCGACAGG
GGCAGGCGCCAGTGGTCGAGCGGCGAAGCCCCCGCTTGATGTGCGCATTT
TTTGGCCGCAGGGCCGCAGGTTCTTCGCAACACGTTTCAACAGATGTCTG
CCTCCTTGCTGGACAAGCAGCTTCACATTCACGTCCGGAAAGGAGATGTG
AGGGGGGTAGAGAAGACGCTTCAACTCGGAGCTTGCATTGATGGGTTCGA
CGCGCATAGGCCGCTCCACGTGGCGGCCAGTTTCGGGCGTGCAGATGTCA
TCGCGGTGCTCGCGGCGAGAGGCGCGGACCTTGAAGCCTCCGTCCCAGGC
GACGTGCGCGACGGCGAGGGGCGCTTCGTTTTCTCGAGAGGCTCGCGGGC
GATCCACGCCGCCGTCTACGCTAGAATGCCCGACGCCATCCACGCCCTGA
CGGCGGCGGGAGCGAACCCGAACGCGGCGGACGCGACCGGCCACACCCCG
CTGATGCAGGCTTGCCGGTCGCTCGACACGAAGGAACGCATCGCCATGGT
GCGAGAGCTGCTGACCGCCGGCGCCGATCCGGCGCTGCAGAGCGACGACG
GCATGGTCGCCCTGCACTTCGCGGCCCTCAGGGACGGTGCCGACGTAATC
GAGTTGCTCGTGCGCAGACAACGGGCGACACTCGACCAGTCGACCGGGTA
CGCGGGAACGCCGCTGTGTTGCGCCGCCTCTGCCGGGTTCGAGAAGGCGG
TTTCGTGCTTGATGTCGCTCGGGGCGAGCGACAGGGCGCTGTGGTCGGAG
AAGGGCGCGAGCGCTCTCATCGGGGCCGTGCAAGAAGGCCGGGAGGGCGT
GGTGAGCATCCTTCTCGGTGCGGACAGCATCGACACCGTGGGAGGCGCGG
CCGCGGTCTCCAAAGCGATCCGCACGGCCGTCCGCAAGAGGGAGGCGAGA
ATGCTCCACATGCTGCTCGCCACCGCGGAGGGGGAGAAGCAACAAGAGCT
CTGGGCACGGCAGCGTTCGAGCGATACGCCTTTGCTCAGTCAGGCCGCCG
AGGCCGGCTCTCTCGCCGTGGTCAATGTCCTGCTGCGCGCCGGGGCCCAG
GAGAACGAAGGGGGCCCCGGAAATCGTCCCAGCGAATGCATCCGCTTCAC
CGGCAGGATTAATCCGCCGCAGGAGGCGGCCATAGTTAGAATGCTGCGCC
GGGGACCAGCATACCGTGCTCGGCCAAGGGCGTGGCCGACAGGGGCAGGC
GCCAGTGGTCGAGCGGCGAAGCCCCCGCTTGATGTGCGCATTTTTTGGCC
GCAGGGCCGCAGGTTCTTCGCAACACGTTTCAACAGGTACACCAACAAAT
GCGCGGAAGGGGGCGGCATTCTCCTTGTAGGCCGCGGAAGCCTTGTGTGA
GTACACCAACAAATGCGCGGAAGGGGGCGGCATTCTCCTTGTAGGCCGCG
GAAGCCTTGTGTGA
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