mRNA_L-elsbetiae_contig1533.3780.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: A0A6H5KT71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT71_9PHAE) HSP 1 Score: 504 bits (1298), Expect = 4.070e-170 Identity = 256/283 (90.46%), Postives = 273/283 (96.47%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFSDGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILLV 849 D+LEGTLVVNTPEAWDCK++NISMQGNVCLFDSAERR +FSDGPKPLALLHETI++MG GRFPEG+TEIPFEAEV+GIDGMPLLNSYSGVYLSIGYHI+AKIERG+MRNDLSKKIEFMVEVPGE A+SP+TEVPFEITPETLE+APKRYG RQRRLRPFRV+GRL+ AT+STS+PLTGEVVVEESERPIKSLEVQLVRVETV QAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCF EA EGYTATQNFQILLV Sbjct: 25 DILEGTLVVNTPEAWDCKSVNISMQGNVCLFDSAERRSLFSDGPKPLALLHETINIMGAGRFPEGQTEIPFEAEVRGIDGMPLLNSYSGVYLSIGYHISAKIERGMMRNDLSKKIEFMVEVPGE--AASPATEVPFEITPETLEYAPKRYG--RQRRLRPFRVSGRLYSATVSTSQPLTGEVVVEESERPIKSLEVQLVRVETVSQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEA-EGYTATQNFQILLV 302
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: D8LQ86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ86_ECTSI) HSP 1 Score: 362 bits (930), Expect = 4.280e-116 Identity = 202/283 (71.38%), Postives = 212/283 (74.91%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFSDGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILLV 849 D+LEGTLVVNTPEAWDCK++NIS YSGVYLSIGYHI+AKIERG+MRNDLSKKIEFMVEVPGE A+SP+TEVPFEITPETLE+APKRYG RQRRLRPFRV+GRLH AT+STSRPLTGEVVVEESERPIKSLEVQLVRVETV QAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCF EA EGYTATQNFQILLV Sbjct: 25 DILEGTLVVNTPEAWDCKSVNIS---------------------------------------------------------------YSGVYLSIGYHISAKIERGMMRNDLSKKIEFMVEVPGE--AASPATEVPFEITPETLEYAPKRYG--RQRRLRPFRVSGRLHSATVSTSRPLTGEVVVEESERPIKSLEVQLVRVETVSQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEA-EGYTATQNFQILLV 239
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: F0YB46_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB46_AURAN) HSP 1 Score: 228 bits (580), Expect = 3.530e-64 Identity = 131/286 (45.80%), Postives = 178/286 (62.24%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFSD--GPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQG--QLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 DV++G L+V+ + W K I++ + G+ L S G+F +P LL I + PGRFP+G TEIPFE E++ + G L SY GVY+++ Y + + +RG+M L + IEF+VEVP + S P+ F ITPE+LE R F+V+G+LH + + P TGE VVEES+ +KS+E+QLVR ETV + REATEIQN+QI EGDVCR LVIPIYM+ PRLF+CPTM+T F+VEFE+N+IV F +GY T+NF I L Sbjct: 27 DVVDGKLIVSARKGWAHKGISMKVTGSAQLQLSHRSMGLFESVSSVRPRELLRTQIELTPPGRFPDGVTEIPFEFELQALAGEALHESYHGVYINVCYTMACECKRGVMSKPLERDIEFIVEVPSK--ESPPADPRAFSITPESLENVRASSVAAIPR----FKVSGKLHRQSCPINLPFTGEFVVEESQASVKSIELQLVRSETVRHPESGNTAREATEIQNIQIAEGDVCRNLVIPIYMIFPRLFTCPTMITDDFKVEFEVNLIVIF---GDGYMITENFPIKL 303
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: A0A8K1FJJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJJ2_PYTOL) HSP 1 Score: 226 bits (577), Expect = 6.700e-64 Identity = 123/285 (43.16%), Postives = 185/285 (64.91%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 ++L+G +++++P+ + + I++ ++G+ L SA+ G+F + P+ L++ I V G+ P G ++ PFE E+ GIDG L +Y GVY+S+ Y IT RGLM++ L K +EF+VEVP + P E F ITP +LE +++ + F+V+GR+H + P TGE+V+E + PIKS+E+QL+RVE+V ++G R+ATEIQN+QIG GDVCR + IPIYM+ PRLF+CPTM+TPRF+VEFE NV+V F +G T+NF I L Sbjct: 19 ELLQGQVLISSPKGFAHQGISMKVEGSARLQLSAKSTGLFESFYNTVTPMDLVYFHIPVAPAGKVPLGISKFPFEFELTGIDGQQLFETYHGVYVSVKYEITCSCVRGLMKSTLQKTLEFIVEVPLQEPLHDAPEE--FNITPNSLENVRRKHLST----VPTFQVSGRIHRTNCPVNLPFTGEIVIEHASAPIKSIELQLIRVESVAHSEGVARDATEIQNVQIGWGDVCREMSIPIYMIFPRLFTCPTMLTPRFKVEFETNVVVLF---EDGNMITENFPITL 294
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: K3WEV9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEV9_GLOUD) HSP 1 Score: 224 bits (571), Expect = 4.860e-63 Identity = 123/285 (43.16%), Postives = 179/285 (62.81%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 +V++G +++++P+ + + I + ++G+ L SA+ G+F PL L++ I + G+ P G T+IPFE E+ G D PL +Y GVY+S+ Y I RG+M+++L K +EF+VEVP P E F ITPETLE ++ + F +TGR+H + P TGE+VVE + PIKS+E+QL+RVE+V A+G R+ATEIQN+QIG GDVCR L IPIYM+ PRLF+CPTM+ +F+VEFE N++V F +G T+NF I L Sbjct: 20 EVVQGQVIISSPKGFAHQGIAMKVEGSARLQVSAKSAGLFDAFYSAVAPLQLVYLHIPIAPAGKVPFGVTKIPFEFELVGNDAQPLFETYHGVYVSVKYEIVCDCVRGIMKSNLHKTMEFIVEVPLREPLRDAPEE--FSITPETLENVRRKS----LTTIPDFHITGRIHRTNCPVNLPFTGEIVVEHASSPIKSVELQLIRVESVAHAEGVARDATEIQNVQIGWGDVCRQLAIPIYMIFPRLFTCPTMLAAKFKVEFETNIVVLF---EDGNMITENFPITL 295
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: W2RB33_PHYPN (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=W2RB33_PHYPN) HSP 1 Score: 224 bits (570), Expect = 6.720e-63 Identity = 120/286 (41.96%), Postives = 182/286 (63.64%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLE-FAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 ++++G +++++P+ + + + + ++G+ + S + G+F + PL L++ + V G+ P G T+ PFE E++G DG LL +Y GVY+S+ Y I RG+M+N L K +EF+VEVP P P + F ITPE+LE P+ + F +TG++H + P TGE+++EE++ PIKS+E+QL+RVE+V A+G R+ATEIQN+QIG GDVCR + IPIYM+ PRLF+CPTM+TP F+VEFE NV+V F G T+NF I L Sbjct: 20 EMVQGQVIISSPKGFSHQGLAMKVEGSARMQLSTKSAGLFDSFYNNVSPLELVYFHLPVAAAGKVPPGITKFPFEFELQGNDGQELLETYHGVYVSVKYEIICDCIRGIMKNKLHKTLEFVVEVPLREPL--PDSPEEFHITPESLENVRPQSLSA-----MPYFHITGKVHRTNCPVNLPFTGEIIIEEAKSPIKSVELQLIRVESVAHAEGIARDATEIQNVQIGWGDVCRQMAIPIYMIFPRLFTCPTMLTPAFKVEFETNVVVLF---ENGNMITENFPITL 295
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: A0A0W8CRJ7_PHYNI (Down syndrome critical region protein 3 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CRJ7_PHYNI) HSP 1 Score: 223 bits (569), Expect = 9.300e-63 Identity = 120/286 (41.96%), Postives = 182/286 (63.64%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLE-FAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 ++++G +++++P+ + + + + ++G+ + S + G+F + PL L++ + V G+ P G T+ PFE E++G DG LL +Y GVY+S+ Y I RG+M+N L K +EF+VEVP P P + F ITPE+LE P+ + F +TG++H + P TGE+++EE++ PIKS+E+QL+RVE+V A+G R+ATEIQN+QIG GDVCR + IPIYM+ PRLF+CPTM+TP F+VEFE NV+V F G T+NF I L Sbjct: 20 EMVQGQVIISSPKGFSHQGLAMKVEGSARMQLSTKSAGLFDSFYNNVSPLELVYFHLPVAAAGKVPPGITKFPFEFELQGNDGQELLETYHGVYVSVKYEIICDCIRGIMKNKLHKTLEFVVEVPLXEPL--PDSPEEFHITPESLENVRPQSLSA-----MPYFHITGKVHRTNCPVNLPFTGEIIIEEAKSPIKSVELQLIRVESVAHAEGIARDATEIQNVQIGWGDVCRQMAIPIYMIFPRLFTCPTMLTPAFKVEFETNVVVLF---ENGNMITENFPITL 295
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: L8H350_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H350_ACACA) HSP 1 Score: 220 bits (560), Expect = 1.780e-61 Identity = 122/288 (42.36%), Postives = 182/288 (63.19%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPG--EIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILLV 849 +V+ G +V+ + + + I + M+GN L SA+ G+F + KP+ +L+ + V PG+ P+G TEIPFE +++ + G L +Y GV+++I Y + A RG M L K +EF+VEV + P EVPF ITP+++E K R+ F++TG+L AT + +RP TGE+++EE++ IKS+EVQLVRVET A G +EATEIQN+QI EGDVCR LVIPI+M+ PRLF+CP+ F++EFE+N++V F +G+ T+NF I L+ Sbjct: 19 EVVSGAIVIESKGSLSHQGIQLVMEGNTTLQLSAKSVGLFEAFYNSLKPIQMLYVPVEVAKPGKLPDGTTEIPFEFKLEPLAGQKLYETYHGVFVNIQYQLRATCVRGFMAKTLEKTLEFIVEVKSSKDYPKDQ---EVPFSITPQSIENVKKTSVN----RIPNFKITGKLTTATCAITRPFTGELIIEEADAIIKSVEVQLVRVETCGCADGFAKEATEIQNIQIAEGDVCRQLVIPIFMIFPRLFTCPSTAARTFKIEFEVNLVVLF---EDGHLVTENFPIRLI 296
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: A0A1S3I9N6_LINUN (Down syndrome critical region protein 3 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I9N6_LINUN) HSP 1 Score: 219 bits (559), Expect = 2.380e-61 Identity = 122/285 (42.81%), Postives = 179/285 (62.81%), Query Frame = 1 Query: 1 DVLEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFS---DGPKPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 DV+ G +V+ + ++ + I ++++GNV L SA+ G+F + KP+ LLH + + PG+ P GKTEIPFE +K L +Y GV+++I Y I ++R L+ DL K++EF+VE E + + V F I+PETL+ ++ R F+V G+L A ++P TGE+ VE SE P+KS+E+QLVRVET A+G ++ATEIQN+QI EGDVCRG+ IPIYMV PRLF+CPT+ T F+VEFE+N+++ F + T+NF I L Sbjct: 20 DVVAGLVVIQSKDSVQHQGITLTVEGNVGLQLSAKSVGLFEAFYNSLKPIQLLHYNLDIAKPGKLPSGKTEIPFEVPLKPKGNKTLYETYHGVFVNIQYTIKVDMKRSLLNKDLQKQLEFIVEYK-EQEEKAKAKVVQFTISPETLQNVKEKVNVPR------FKVKGKLDTAVCLITKPFTGELTVESSEAPLKSIELQLVRVETCGCAEGYAKDATEIQNIQIAEGDVCRGISIPIYMVFPRLFTCPTLATNNFKVEFEVNIVIVF---QDDRLVTENFPIQL 294
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Match: A0A482SF66_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF66_9ARCH) HSP 1 Score: 219 bits (559), Expect = 3.030e-61 Identity = 119/284 (41.90%), Postives = 174/284 (61.27%), Query Frame = 1 Query: 7 LEGTLVVNTPEAWDCKAINISMQGNVCLFDSAERRGIFSDGP----KPLALLHETISVMGPGRFPEGKTEIPFEAEVKGIDGMPLLNSYSGVYLSIGYHITAKIERGLMRNDLSKKIEFMVEVPGEIPASSPSTEVPFEITPETLEFAPKRYGGGRQRRLRPFRVTGRLHGATISTSRPLTGEVVVEESERPIKSLEVQLVRVETVEQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVEAAEGYTATQNFQILL 846 +EG ++V+ + W IN+ ++G + L S RG G +P+ LL + I V G G+FP+G E+PF V + G L SY GVY+SI Y+I A +RG+M+ L K EF+VE+P ++ S V F ITPE L + + F V+G+LH ++PLTGEV++E S P+KSLE+QLVRVETV +EATE+QN+QIG+G++CR +P+YMV PR+FSCPT++TP F++EFE+N+I+ + + Y T+NF I+L Sbjct: 23 VEGNVIVHAFKGWSHSGINLVVEGLIYL--SHSNRGFAGIGGDPNNRPIHLLRQEIQVCGAGKFPDGVAELPFSFVVNPVSGQQLYESYHGVYVSIVYNIQATCDRGVMKKSLIKDTEFLVEIPMQVDKKE-SEPVSFSITPEALSNVNSKAAST----IPKFSVSGKLHRTKFPINQPLTGEVLIELSAAPVKSLELQLVRVETVSTDGRLTKEATEVQNIQIGDGNICRNFSVPMYMVFPRIFSCPTLITPTFKIEFEVNLIMIY---GDDYMITENFPIVL 296 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1533.3780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1533.3780.1 >prot_L-elsbetiae_contig1533.3780.1 ID=prot_L-elsbetiae_contig1533.3780.1|Name=mRNA_L-elsbetiae_contig1533.3780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=261bp MQGNVCLFDSAERRGIFSDGPKPLALLHETISVMGPGRFPEGKTEIPFEAback to top mRNA from alignment at L-elsbetiae_contig1533:14098..21369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1533.3780.1 ID=mRNA_L-elsbetiae_contig1533.3780.1|Name=mRNA_L-elsbetiae_contig1533.3780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7272bp|location=Sequence derived from alignment at L-elsbetiae_contig1533:14098..21369+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1533:14098..21369+ >mRNA_L-elsbetiae_contig1533.3780.1 ID=mRNA_L-elsbetiae_contig1533.3780.1|Name=mRNA_L-elsbetiae_contig1533.3780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1566bp|location=Sequence derived from alignment at L-elsbetiae_contig1533:14098..21369+ (Laminarionema elsbetiae ELsaHSoW15)back to top |