mRNA_L-elsbetiae_contig153.3760.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig153.3760.1
Unique NamemRNA_L-elsbetiae_contig153.3760.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A6H5KDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ1_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.460e-118
Identity = 191/277 (68.95%), Postives = 217/277 (78.34%), Query Frame = 2 
Query:  389 MYHSLGASESLPVVSTSEGHG-GLQTVPALTEHLSKARWRAWMYPEGAHELEDKFEHAFGHAAMGVAYAYLFQKEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKRSRKGGATGKPV--VRSPRRGRSFTLKKNVNSPSRITARERGDRRATITQATRAAPQLPRVAPKHRASFAA 1210
            MYHSLGA +SLPV+ST+EG G  L+TVPAL EHLS ARWRAWMYPEGAHELE + E AFG A M V YAYLFQ+ M  +T++MFSRGLPLWQRLL+P LG  ++   +  LRL   I +N+KIIE+TFGLVE +LSDGR YLCGDSIS ADITFA+LAFPV+LPEETA VFV YDPR LPRGYVE+IKSLR REGG FALRLYR+KR+RKG     PV  +RS RRGRSFTLKKNVNSP    +  RGDRRAT+T       Q+P   PKHRASFAA
Sbjct:    1 MYHSLGADDSLPVISTNEGRGESLKTVPALMEHLSTARWRAWMYPEGAHELEKELEQAFGQAVMRVVYAYLFQEGMRSKTIKMFSRGLPLWQRLLMPTLGVGLVNTMNNRLRLEGGIRSNMKIIEKTFGLVERLLSDGRAYLCGDSISAADITFAALAFPVLLPEETADVFVEYDPRLLPRGYVEVIKSLRFREGGAFALRLYRNKRTRKGS----PVTPLRSSRRGRSFTLKKNVNSPLHNLSSRRGDRRATVTHPRHVELQMPLTPPKHRASFAA 273
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: D8LQN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN8_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.690e-45
Identity = 81/118 (68.64%), Postives = 97/118 (82.20%), Query Frame = 2 
Query:  596 LFQKEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIK 949
            +F +EM  ET++MFSRGLPLWQRLL+P LG  ++   +E LRL   I +N+K IE+TFG+VE +LSDGR YLCGDSIS ADITFA+LAFPV+LPEETA VFV YDPR LPRGYVE+IK
Sbjct:   23 VFHEEMRSETIKMFSRGLPLWQRLLMPTLGVGLVNMMNERLRLEGGIRSNMKTIEKTFGMVERLLSDGRAYLCGDSISAADITFAALAFPVLLPEETADVFVEYDPRLLPRGYVEVIK 140
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A836CPN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.050e-34
Identity = 102/279 (36.56%), Postives = 140/279 (50.18%), Query Frame = 2 
Query:  188 LWKHLPSRLRPWTFRLLGTRYSPASQVNRVFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYH-SLGASESLP-VVSTSEGHGG-LQTVPALTEHLSKARWRAWMYPEG-AHELEDKFEHAFGHAAMGVAYAYLFQKEM--HRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKR 1006
            L  HLP  L      +    YSPA     + +L +S+Y EK RW L+L  E ++E+ V     R TA  + S  A  +LP VV+T +G    L     +T  L ++R +AW+YP   A  LE  F   FG  A   AY Y+        R    + +RG  L    L     PR     +  +RL   +P+NL+ ++  F LVE  L +G PYLCG  +S ADI FASLA+P++LP E A  F+A +   LP  Y  I+   R+   G FALR+Y H R
Sbjct:  136 LQSHLPRPLCNLFSHITNGPYSPARNDAVLLSLAYSHYCEKARWVLDLCQESYEEICVPACSVRLTAKLNGSKAAFGTLPLVVATVDGERAMLPDSGDVTAMLCESRQQAWLYPMADARALETYFSDQFGLPAFRAAYFYMLSPATCEPRVMAAITARGYLLIAHALSR--APRAA-AAARFMRLEAQLPSNLEAVDAAFALVERRLREGGPYLCGAELSAADIAFASLAYPMVLPPEQAHRFIARESPDLPEAYARIVDRYRATPAGQFALRVYAHNR 411
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A1S3K7N9_LINUN (uncharacterized protein LOC106179276 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K7N9_LINUN)

HSP 1 Score: 127 bits (320), Expect = 5.390e-29
Identity = 86/268 (32.09%), Postives = 140/268 (52.24%), Query Frame = 2 
Query:  239 GTRYSPASQVNRVFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPA---LTEHLSKARWRAWMYP-EGAHELEDKFEHAFG--HAAMGVAYAYLFQKEMHRETM-EMFSRGLPLWQRLLVPVLGPRV--MFKTSEDLRLTEAIPANLKIIERTFGLVESILSDGRPYLCGD-SISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKRSR 1012
             T Y+     + +  L +S++ EK+ W  +LSG   +E      F   T ++H+ G + S PV+ TS+     Q+      L E   K   + W++P E A E++ +F  AFG  HAA  + Y YL+   + +  + E+F +G+P WQ   V +L P V  +F    +++  +    N  I+   +  VE +L+DGR  +C    IS ADI FA+L++P++LP E    F+A++  ++P  Y + +K  R+   G F LRLYR  R R
Sbjct:   50 NTMYAGDRSKHILITLPYSHFCEKVNWACQLSGVPVEEKGYIPIFHNIT-LWHT-GKNSSTPVMITSQNTVLPQSTDIMRFLKERNLKKFEKDWIFPCEEAVEMDARFSEAFGYGHAAFCIVYCYLYGDSLGKHRLREVFQKGVPKWQAACVGLLWPSVEFIFTRFVNIKSADFFRKNQTIVNEVWDKVERLLADGRKNICDTPEISGADIAFAALSYPLVLPPEMNEKFMAFEKGTIPAQYYDEVKRRRNTAAGKFILRLYREHRHR 315
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: I4B578_TURPD (Glutathione S-transferase domain-containing protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) TaxID=869212 RepID=I4B578_TURPD)

HSP 1 Score: 114 bits (285), Expect = 5.660e-25
Identity = 82/255 (32.16%), Postives = 133/255 (52.16%), Query Frame = 2 
Query:  272 RVFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVP---ALTEHLSKARWRAWMY--PEGAHELEDKFEHAFGHAAMGVAYAYLFQKEMHRETMEMFSRGL-PLWQRLLVPVLGPRVMFKTSEDLRL--TEAIPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYV--EIIKSLRSREGGLFALRLYRHKR 1006
            R+ ++  S+Y EK++W L+L+G  F E            ++H+ G   + PV+   +G    + +P   A+ +HL+    + W+Y  PE A  LE++F+ + G       Y +LF  E+     E+FS+ + P WQ+ ++P+  P +      ++ +   EA  + L + E  F  V+ +L DGRP+LCG+ IS ADITFA+LA PVILP E  +     D  S+  G     +I+  R+   G +  RLYR  R
Sbjct:    2 RLISISISHYVEKVKWALQLAGLPFTEESYIPGLHAAVTLWHTGGRHRATPVL-IDDG----EVIPDSTAILQHLAARYRQTWLYAHPE-ALVLEERFDASIGPHTRRFIYRHLFDNEL--SLAEIFSQDVVPAWQKRMLPLAAPMLKAGMIAEMAIYHDEAERSRL-VFEAEFAYVDKLLQDGRPFLCGEKISAADITFAALAAPVILPSEYGARLP--DLNSVKPGSTLPAVIEGYRNTTAGKYVQRLYRENR 245
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A1S3H5Y1_LINUN (uncharacterized protein LOC106151430 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H5Y1_LINUN)

HSP 1 Score: 114 bits (285), Expect = 3.730e-24
Identity = 71/262 (27.10%), Postives = 132/262 (50.38%), Query Frame = 2 
Query:  260 SQVNRVFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPALTEHLSKAR----WRAWMYPE-GAHELEDKF--EHAFGHAAMGVAYAYLF---QKEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIP--ANLKIIERTFGLVESILSDGRPYLCGD-SISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKR 1006
            ++ + +  +  S + E +RW  +++GE +DE  V   F    +++ +LG++ ++P++ T   H  L T  A    L           W++P   A E E     + ++G A M   Y Y F   + +  ++ +++  +G+  WQ +L+P L P         L++ + +   AN++ +++T+  V  +LSDGR Y+ G    S ADI FA+L++P+ILP E      ++    LP  Y + ++  R    G F LRL++ +R
Sbjct:   70 TKTHVLITMPFSPFCETVRWAFDMAGEPYDERSVGPIFHYFVSLFQTLGSNRAVPIMITHPDHRVLPTSHACLRFLGDLNNERFGEDWVFPSRDAEEFEMNLSADDSYGQAVMRCVYHYFFTAKEDDGKKQLLQVCKKGISKWQSVLLPFLWPGYELIIKLSLKVDDQVTFKANIEQVDKTWDKVNQLLSDGRKYILGTRQASGADIAFAALSYPLILPTEMDGGLFSFSKDPLPPRYRKEVERRRKSAAGRFVLRLFKEER 331
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A7S1A517_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A517_NOCSC)

HSP 1 Score: 105 bits (263), Expect = 1.460e-21
Identity = 73/247 (29.55%), Postives = 121/247 (48.99%), Query Frame = 2 
Query:  275 VFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPALTEHLSKARWRAWMYPE-GAHELEDKFEHAFGHAAMGVAYAYLFQKEMHRETME-MFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIPANLKIIERTFGLVESILSDGRPYLCGD-SISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKR 1006
            V AL +S + EK+ W  +     +  +        PT +     AS  +PVV   +G     +   L     +    +W+YP     E+E +   AFG +   + Y +LF  +     +  ++  G+   +RLL   L P + +     L L + +P  +  ++  F  V  +L DGR Y+CG   ++ ADITFA+LA+P++LP+E A+VFV++    LP G+   ++S R    G F LRLY+ +R
Sbjct:   55 VVALPYSPFCEKVYWAYDRCKAAYG-IRAVFQGVFPTTLMEFSAAS--VPVVVVDDGSVLKDSKDVLDALCDEGH--SWLYPSPSVREVERRLGDAFGKSVARIVYHHLFSTDEGCVLLRRIWKVGVSPVERLLCDPLFPSIRWAMLSGLELPDGLPGFVATVDECFARVSDMLDDGRKYICGTPEMTAADITFAALAYPLVLPDEKAAVFVSWGDE-LPEGFRAEVRSRRETPAGQFVLRLYKEER 295
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A4R7P505_9GAMM (Glutathione S-transferase n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4R7P505_9GAMM)

HSP 1 Score: 104 bits (259), Expect = 1.940e-21
Identity = 77/254 (30.31%), Postives = 120/254 (47.24%), Query Frame = 2 
Query:  272 RVFALRHSNYSEKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPALTEHLSKARWRAWMYPEGAH----ELEDKFEHAFGHAAMGVAYAYLFQKEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLT-EAIPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKRSRKG 1018
            R+  +  S+Y EK RW L  +G ++ E P    F       H+ G    + V  T         +  L  H    R R  +YP+       ELE++F+   G       Y + +  E  R+ + + ++G P W+RLL P+L P +    +  LR T + + A L II   F  V ++L+DGRPYL G   + AD+TFA +A PV+LP E   +    +   +    +E+ +  R    G F LRLY+ +R+  G
Sbjct:    2 RLITIPMSHYCEKARWGLAHAGLEYLEQPHLQVFHYLAVRRHARGGKVPVLVADTEVIEDSTAILQFLDHHYVPERRR--LYPDAQRNEIEELEERFDTMLGVETRRWVY-FRWIDEPTRDVLRVAAQGTPWWERLLAPLLFPLMRRFLAMRLRATRQNVEAGLLIISTIFDEVGALLADGRPYLMGAEFTAADLTFACMAAPVLLPPEYGVLLPTLEEAPI-EARIEV-ERFRLHPAGQFVLRLYQQRRAEMG 250
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A7J5EU63_9DELT (Glutathione S-transferase family protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7J5EU63_9DELT)

HSP 1 Score: 101 bits (251), Expect = 2.030e-20
Identity = 74/254 (29.13%), Postives = 124/254 (48.82%), Query Frame = 2 
Query:  272 RVFALRHSNYSEKLRWTLELSGEQF-DEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPALTEHLSKARW-----RAW-MYPEGAHE---LEDKFEHAFGHAAMGVAYAYLFQKEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEA-IPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRS--LPRGYVEIIKSLRSREGGLFALRLY 994
            R+  +  S+Y EK RW L+ +   + ++  + +F   P       GA  + P + T +G         L +     RW     RA  ++P G  E   L+++F+   G A   + Y YL + +  R T+++ ++  P W+R+L     P         LR+  A    +  +I+RTF  +   L DGR YLCGD ++ AD+TFA+LA PV+LP++    +  Y PR   +P  + E+  + R+   G + LR+Y
Sbjct:    6 RLITIAFSHYCEKARWALDRADIDYVEDAHLPLFSYLPLVR---AGAKRTAPALVTDDG-------TVLVDSTDILRWCDAHGRAEPLFPPGDDEVVALKEEFDRHLGPATRRLGYFYLLKDK--RATLDVLAKHGPRWERVLGKASRPLAAALLRRGLRIDPAGAERSRAVIDRTFSEIGERLRDGRKYLCGDRLTAADLTFAALAAPVLLPDQ----YSEYLPREELVPPAFREVADAYRATPAGEYGLRMY 243
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BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Match: A0A831ZMX3_9DELT (Glutathione S-transferase n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZMX3_9DELT)

HSP 1 Score: 101 bits (251), Expect = 2.460e-20
Identity = 81/261 (31.03%), Postives = 132/261 (50.57%), Query Frame = 2 
Query:  254 PASQVNRVFALRHSNYSEKLRWTLELSGEQF-DEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGGLQTVPALTEHLSKARWRAW--MYPEGAHE----LEDKFEHAFGHAAMGVAYAYLFQKEMHRETM-EMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEA-IPANLKIIERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVAYDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKRS 1009
            P++Q  R+  +  S+Y EK RW LE     F +E  +  F A P     +L +S    V    EG+  +    A+    + A+  A   +YP+   +    LE++F+   G A+   AY ++ ++   RE + ++  +G P WQ   +P + P   +   + +R+ +A I  + + ++R F  V ++LSDGR YLCGD +S ADITFA+LA P ++P    S       R LP      I + R+   G FALR+Y  +R+
Sbjct:    2 PSTQP-RLITITFSHYCEKARWALEYRKIAFTEEAHLPTFHALP-----ALRSSRQRMVPVLVEGNTAIPDSTAILR-WADAQQSAGPRLYPDALADEILALEERFDRDLGPASRRWAYGFILRE---RELLLKIAEQGAPPWQHRTLPYIFPFARWLMRKSMRIDDAGIARSRQKLDRVFDDVAALLSDGRRYLCGDQLSAADITFAALAAPALMPAAYGSPLPPI--RELPAKPRTEIAAYRAHAAGAFALRIYAEERT 250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig153.3760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ1_9PHAE1.460e-11868.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN8_ECTSI2.690e-4568.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CPN8_9STRA4.050e-3436.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1S3K7N9_LINUN5.390e-2932.09uncharacterized protein LOC106179276 isoform X1 n=... [more]
I4B578_TURPD5.660e-2532.16Glutathione S-transferase domain-containing protei... [more]
A0A1S3H5Y1_LINUN3.730e-2427.10uncharacterized protein LOC106151430 isoform X1 n=... [more]
A0A7S1A517_NOCSC1.460e-2129.55Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A4R7P505_9GAMM1.940e-2130.31Glutathione S-transferase n=1 Tax=Panacagrimonas p... [more]
A0A7J5EU63_9DELT2.030e-2029.13Glutathione S-transferase family protein n=1 Tax=K... [more]
A0A831ZMX3_9DELT2.460e-2031.03Glutathione S-transferase n=1 Tax=Nannocystis exed... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig153contigL-elsbetiae_contig153:41103..45892 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.0
Seed ortholog evalue5.4e-18
Seed eggNOG ortholog529818.AMSG_11967T0
KEGG koko:K04739
KEGG Pathwayko04910,map04910
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.cAMP-dependent protein kinase regulator activity
EggNOG OGsCOG0664@1,KOG1113@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionGlutathione S-transferase, C-terminal-like
Ec32 orthologEc-10_006380.1
Exons9
Model size1843
Cds size1209
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815623.3866355-UTR-L-elsbetiae_contig153:41102..411061622815623.3866355-UTR-L-elsbetiae_contig153:41102..41106Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig153 41103..41106 +
1691682997.652782-UTR-L-elsbetiae_contig153:41102..411061691682997.652782-UTR-L-elsbetiae_contig153:41102..41106Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig153 41103..41106 +
1622815623.5155702-UTR-L-elsbetiae_contig153:45262..458921622815623.5155702-UTR-L-elsbetiae_contig153:45262..45892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig153 45263..45892 +
1691682997.7508337-UTR-L-elsbetiae_contig153:45262..458921691682997.7508337-UTR-L-elsbetiae_contig153:45262..45892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig153 45263..45892 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815623.398739-CDS-L-elsbetiae_contig153:41106..411961622815623.398739-CDS-L-elsbetiae_contig153:41106..41196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41107..41196 +
1691682997.6626573-CDS-L-elsbetiae_contig153:41106..411961691682997.6626573-CDS-L-elsbetiae_contig153:41106..41196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41107..41196 +
1622815623.415403-CDS-L-elsbetiae_contig153:41384..415551622815623.415403-CDS-L-elsbetiae_contig153:41384..41555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41385..41555 +
1691682997.6705456-CDS-L-elsbetiae_contig153:41384..415551691682997.6705456-CDS-L-elsbetiae_contig153:41384..41555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41385..41555 +
1622815623.4253843-CDS-L-elsbetiae_contig153:41867..419541622815623.4253843-CDS-L-elsbetiae_contig153:41867..41954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41868..41954 +
1691682997.6781611-CDS-L-elsbetiae_contig153:41867..419541691682997.6781611-CDS-L-elsbetiae_contig153:41867..41954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 41868..41954 +
1622815623.437018-CDS-L-elsbetiae_contig153:42380..425071622815623.437018-CDS-L-elsbetiae_contig153:42380..42507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 42381..42507 +
1691682997.685648-CDS-L-elsbetiae_contig153:42380..425071691682997.685648-CDS-L-elsbetiae_contig153:42380..42507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 42381..42507 +
1622815623.452263-CDS-L-elsbetiae_contig153:42972..431001622815623.452263-CDS-L-elsbetiae_contig153:42972..43100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 42973..43100 +
1691682997.693319-CDS-L-elsbetiae_contig153:42972..431001691682997.693319-CDS-L-elsbetiae_contig153:42972..43100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 42973..43100 +
1622815623.4656112-CDS-L-elsbetiae_contig153:43330..434941622815623.4656112-CDS-L-elsbetiae_contig153:43330..43494Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 43331..43494 +
1691682997.707054-CDS-L-elsbetiae_contig153:43330..434941691682997.707054-CDS-L-elsbetiae_contig153:43330..43494Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 43331..43494 +
1622815623.4792602-CDS-L-elsbetiae_contig153:43805..439851622815623.4792602-CDS-L-elsbetiae_contig153:43805..43985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 43806..43985 +
1691682997.7166414-CDS-L-elsbetiae_contig153:43805..439851691682997.7166414-CDS-L-elsbetiae_contig153:43805..43985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 43806..43985 +
1622815623.4889348-CDS-L-elsbetiae_contig153:44323..444641622815623.4889348-CDS-L-elsbetiae_contig153:44323..44464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 44324..44464 +
1691682997.7260985-CDS-L-elsbetiae_contig153:44323..444641691682997.7260985-CDS-L-elsbetiae_contig153:44323..44464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 44324..44464 +
1622815623.5035992-CDS-L-elsbetiae_contig153:45141..452621622815623.5035992-CDS-L-elsbetiae_contig153:45141..45262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 45142..45262 +
1691682997.739321-CDS-L-elsbetiae_contig153:45141..452621691682997.739321-CDS-L-elsbetiae_contig153:45141..45262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig153 45142..45262 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig153.3760.1prot_L-elsbetiae_contig153.3760.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig153 41107..45262 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig153.3760.1

>prot_L-elsbetiae_contig153.3760.1 ID=prot_L-elsbetiae_contig153.3760.1|Name=mRNA_L-elsbetiae_contig153.3760.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MLEQGEIPSPVSVGAWLTLGLAVVFLVRHQRHQQEMGRPRNNRLLTTFDA
SAVAVAEARLWLWKHLPSRLRPWTFRLLGTRYSPASQVNRVFALRHSNYS
EKLRWTLELSGEQFDEVPVAIFFARPTAMYHSLGASESLPVVSTSEGHGG
LQTVPALTEHLSKARWRAWMYPEGAHELEDKFEHAFGHAAMGVAYAYLFQ
KEMHRETMEMFSRGLPLWQRLLVPVLGPRVMFKTSEDLRLTEAIPANLKI
IERTFGLVESILSDGRPYLCGDSISLADITFASLAFPVILPEETASVFVA
YDPRSLPRGYVEIIKSLRSREGGLFALRLYRHKRSRKGGATGKPVVRSPR
RGRSFTLKKNVNSPSRITARERGDRRATITQATRAAPQLPRVAPKHRASF
AA*
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mRNA from alignment at L-elsbetiae_contig153:41103..45892+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig153.3760.1 ID=mRNA_L-elsbetiae_contig153.3760.1|Name=mRNA_L-elsbetiae_contig153.3760.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4790bp|location=Sequence derived from alignment at L-elsbetiae_contig153:41103..45892+ (Laminarionema elsbetiae ELsaHSoW15)
AAAAATGCTGGAGCAAGGGGAAATCCCAAGTCCCGTCTCGGTCGGGGCTT
GGCTGACACTAGGGCTGGCTGTGGTCTTCTTGGTTCGGCACCAGGTATGG
CGGAGACTCTTGTTCCGAGCAAGAGGGATCTATAGATAGATAGACTCCAC
TGCGGCCTCGCTGAGAAGTTGTACAATACTTACTCAGCTTACATCAAGTT
GTTGTGCTCCTGTCTGGCCTCTTGGAGGTGTTCCCAACATTTCGCATCCG
GCCCTGGTGATTATGTCCTTTCTATCCCGCAGCGACATCAACAAGAAATG
GGGCGGCCAAGAAACAACCGCCTCTTGACAACATTTGACGCATCAGCTGT
CGCTGTCGCCGAGGCTCGGCTGTGGCTGTGGAAACACCTGCCGTCACGTT
TACGGCCGTGGACATTTCGCCTCTTGGGCACTCGGTACTCTCCGGCCAGC
CAGGTATACACTAGCACATTTAGACCATCACATTCATGGTACAGCTGTCG
GTTGTACCCTCGAAATATATACACAGACTACATACATACATAGACTACTG
TAGTCTAGATACATACAACAGATACACGTGCGTTTGGCCGACGCGCGAAG
TACAATAATAACACGGAATCTTGCAGCAAGATGTTCTGGCCTCGCTTATT
GAAGCGACACTGAGGTAGTCTATTTCTGTATGTACACCGTTCCATGATCG
TCAAGGCTCAAATCTCTCGTGATGATCTCTGCATGTGTGGTCCGCATGTT
ACAATACAAGTTCAGGTAAACCGCGTGTTTGCCCTGCGGCATAGCAACTA
CAGCGAGAAGCTCCGCTGGACGCTGGAGCTATCGGGAGAACAATTTGACG
AGGTCTGTACATATGTGGTGCGATGGTGCGATCATCGTTTACGCGCATAG
CCGACCATCAGTTGTTCTCCTGGTTTCCCGAGATCGATCTATGGTTGTTC
AGCATTCGTGCCTACGCAAGGACGTTCGGGTGGTTGATTGCTGGTACGAT
TCCCAAAGCACCATTGAGTCGATGGTTAGTTGCAACTCTCTCCTCCCGAA
ATTACCCGATGGTTTCATGGACGGGCCGCCATGTTCGGCTCGAATACCAT
GGTTCAGTACAAGCTGCTCCAAGGCATCTCCGTAAGGATCTCTCCACTGG
TAGAACATGCTGGGATAAAAGCGTTCCTACTTTTGAGTGGATGCGGTTCC
CCTACCCGTGTCATTCTGCATTGCTATTTCTTCTGTTTAAGCACACCCCC
AACACCTTCGCCCGTTACTTCACGACAGGTTCCAGTTGCTATTTTTTTCG
CGAGACCGACAGCAATGTATCACTCTCTCGGGGCCAGCGAAAGCTTGCCG
GTAGTCTCCACAAGCGAAGGTCACGGTGGTCTCCAAACTGTTCCTGCCCT
CACGGGTAAGATGTCGCTGAGCTGTAGACTAGATATTTTGCGGCGTGTTA
TGAAGCAACACCAACGAGAGGGAGGCCGTTTCGCCTGAGAAGTAGTTTGC
CTCCTCAAAACGTGATCCTTGAGCTTACGCGACACAAACGCTGCTTCGAA
TTCAGATTGTCTGGGTCCCCATGCCCTTGAGTGTGGTTCCACTTTTCCGG
CATGGTGGTTCGGAGAGGTAGTTTCCTCCTCTAAAAGCTGCAGCAAATAT
GGAGAACACCTTTGTTGTGTTCTTAAGAGTTAAATACTGTTGGCTTCGAA
GAAGCTAAATCAGTGGCAAGATTGTGTTCGGCGCAACGCATTATATGCCG
TAGGGTGACAGACACGACACTGTGTTTGCTTTGGTGCTGCCCCAAACTCA
TTCGGAACGGGCCTGTTGCCCATTTTCAGACTCCTCTTGTGTTTTCCTGC
CTCCGAATTTGCTTGCCTAGAACATCTATCGAAGGCAAGATGGCGTGCTT
GGATGTACCCCGAAGGAGCTCACGAACTCGAGGACAAGTTCGAACATGCT
TTTGGCCATGCGGCGATGGGCGTGGCGTACGCCTACCTGTTTCAAAAGGT
ACCGCCTTACAAAGCGCAGGGCGCAAAACCAAATTTCCTCTCAAAACTGC
GGTTCTTCCGATGATTGGTCGTTGTCGTTTGGGAACAACACATGCATATC
AGTTCTGACGCAAGGGTGCTGAGCGGCGCAAGAATGGTCCGAATTGTGGC
TGACAGCCGAGGTATCAAAACTCCAAGACGAAATTTACTCCTACCCCTGC
GGCGACGTCTTTCGTCTTTGCTTTGCAGGAAATGCACCGCGAAACGATGG
AGATGTTCTCGCGTGGCTTGCCACTGTGGCAAAGACTGCTCGTACCAGTG
CTTGGGCCACGAGTGATGTTTAAAACAAGCGAGGACCTGAGGTTGACGGA
GGCGATACCGGCCAATTTGAAGATCATTGAGAGAACCTTCGGGTAAGCCG
CTCCACACATGTATTCAACATAGCCACTATCACCGTGAAGTGGCGTTGGA
ATGGGATTGGGTCCACTACCTACATCCAAGGAGTTGCCTTCTGCAGAGTT
GCTTATCGTAGCCATCGTAGCGAGGAAGGTCACTTTGCTTCGGAACTCTA
TTACGTGCAAAACGTTTCCCACGTGCGCAAACCACATCTGGCGCATTCGT
GCAGTCTGCCGGAGTAAAGTGGCATGATTAGTTTCGCGAGAGCTGATTCG
ATCGGTGCTATTTGTGGCGATGCGCACATTGTATACATCTTATGTGTGCA
CAGGCTCGTGGAGAGCATTCTTTCTGACGGGAGGCCTTACCTGTGTGGCG
ACAGCATCAGCTTGGCAGATATCACCTTCGCATCCCTAGCGTTCCCGGTT
ATTCTCCCTGAGGAGACTGCCAGCGTGTTCGTGGCTTACGACCCGCGGTC
CCTTCCCCGAGGATACGTGGAAATCATCAAGAGGTGCGTGCGGATGAGCG
CGGATGCGTGTACGCATGATGCGGAAGATGAACATGCCGCTAGAAGGCGG
TGAGGACACAACTTGACACATAAAATCACGACAATTGTCGCGAGCTTCAA
GGCTTATGTATTGAAATGAAAAATGATCTCAAAAGCTTCTTTTAAACCCT
ACATAAGGATCTACGCACACAGACTCGCCGGACCCGAACCTGAATATTCT
TGGCGCACAGGCCGCCACCCTGACCGCCAAGGAAAACGAACGATCTCCAA
ACCCGTTCTCATTACCGTTCTCGTTCTCCTGCTCACCCTGCAACCCCAAC
ACAATCTACCGCGTACAAAAGCCTGCGCTCTCGGGAAGGTGGGCTTTTTG
CTCTTCGCCTGTACCGCCATAAGCGATCCCGGAAAGGAGGAGCAACGGGG
AAGCCTGTTGTCCGCTCGCCGCGCAGAGGGCGTAGCTTCACCCTCAAGAA
GAACGTCAACAGGTTTGGACACGCTGTGACTTGATCTAACCCTGATTCTG
GCTGCGGCCTTGTCGGCTTTTCTTTGTCGATTTATTGTCGGTTTCGTGTG
GGGGCAATACATCGCATGTGTCGGGATGCCAGCTACGTTTCGATGAAGCC
CGACCTACCCCTAGCATTTTACCCCCACTCTTGAAAAATCAGAAAATAAA
ACGACACCTTCACAGTACCTGCTCGGACAAGTTGACTAGTTAGGAAGAGA
GGGGGAACACTCATCGACTAGAGGGAAAGGGATGGCTGAACACTTCTCGC
GAAAAAGATAGTAGGCAAGCACCGCTGACGGGGGGAGTAGGGGCCTTGGG
GAAAGGAACCCTTCTATGTGACCGCGGTTCAGCACTCTGGCAAGATATCC
TCGTGACAGGGAGAGCCCATCGAGCACCTGAAATAAATGTGAAGAAGAAA
ATAAAAACATACATAAGTGGTGACAGGTGATGGTCACAAGAGGCCAGGAA
GGAGAGGGGGGGACATGCACGAAACGCCATCAGAAATATGCCCAAGACAC
CAAGTGGTTCCTCGACAGTAGTGGAAGCATTACTTGGTAGGAAAATTCTC
CGTCTTGAAAATGTATGCGGCGAATGACCAAACGGTTCAGCATGCAAGCA
CTAATGAGTGCATGCTTCCCTTTTCCCCCACTGATTCAGCCCTTCGAGGA
TCACGGCACGCGAGCGAGGAGACCGACGGGCCACAATTACACAGGCTACA
CGCGCCGCACCGCAACTCCCGCGGGTTGCTCCCAAGCACAGAGCGAGCTT
CGCAGCGTAGGGATGCTCGTTGGATGCTTGATCCTCGCCTGGAGTATCCA
CATCGTGTTCATATGGGACCGTAGTATATACCGGTACAAGAGTACTACGT
ACCGAGTCGAGCCACCTCGTCGGCTTCATGATTTGCTCGTAGAAACTGAC
TGATACACCAGAGGAGGCCTGGTGCGTCCGTTTAGGGAGGAAAATTTGGG
GGGACATTGCTTGGATTTGTCCACTGTGCGAAGCAAGCTCTAGACTACTG
TACAGTAGGCGACGAAGGAGATGGAATGATACGTGGGGTTTGGTCAGTAA
TTTTATTTGTAATGATGCTTGTTCGAGGCCAGTCCAAGTTAGGTTTACCA
GGCAACCCCAGCGTACTGTATATAGTTCGGCCGACTGAAATAACGTACAA
TACATAGACTTTATCTAGGCTTCAAAAAAGTTGGGGGTGAGACGTTAGAG
AAATAACGGTGGCGTCAGCCTGATTTGTATTATTTGGGGCGGGCCGGCAC
CGCATTAAACTTTGTTTGGGGACAGCTTCAGGCAGCGCGCTTTCTTGCTG
CAAAGTCGCACCCCCCGGGTGCTTGGGAAAATGGGAGGGAACTCGGAAGC
GGTGGAGGTGTATGGTATCGCGTTCTCGAGACAGTTGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig153:41103..45892+

>mRNA_L-elsbetiae_contig153.3760.1 ID=mRNA_L-elsbetiae_contig153.3760.1|Name=mRNA_L-elsbetiae_contig153.3760.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig153:41103..45892+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGAGCAAGGGGAAATCCCAAGTCCCGTCTCGGTCGGGGCTTGGCT
GACACTAGGGCTGGCTGTGGTCTTCTTGGTTCGGCACCAGATGCTGGAGC
AAGGGGAAATCCCAAGTCCCGTCTCGGTCGGGGCTTGGCTGACACTAGGG
CTGGCTGTGGTCTTCTTGGTTCGGCACCAGCGACATCAACAAGAAATGGG
GCGGCCAAGAAACAACCGCCTCTTGACAACATTTGACGCATCAGCTGTCG
CTGTCGCCGAGGCTCGGCTGTGGCTGTGGAAACACCTGCCGTCACGTTTA
CGGCCGTGGACATTTCGCCTCTTGGGCACTCGGTACTCTCCGGCCAGCCA
GCGACATCAACAAGAAATGGGGCGGCCAAGAAACAACCGCCTCTTGACAA
CATTTGACGCATCAGCTGTCGCTGTCGCCGAGGCTCGGCTGTGGCTGTGG
AAACACCTGCCGTCACGTTTACGGCCGTGGACATTTCGCCTCTTGGGCAC
TCGGTACTCTCCGGCCAGCCAGGTAAACCGCGTGTTTGCCCTGCGGCATA
GCAACTACAGCGAGAAGCTCCGCTGGACGCTGGAGCTATCGGGAGAACAA
TTTGACGAGGTAAACCGCGTGTTTGCCCTGCGGCATAGCAACTACAGCGA
GAAGCTCCGCTGGACGCTGGAGCTATCGGGAGAACAATTTGACGAGGTTC
CAGTTGCTATTTTTTTCGCGAGACCGACAGCAATGTATCACTCTCTCGGG
GCCAGCGAAAGCTTGCCGGTAGTCTCCACAAGCGAAGGTCACGGTGGTCT
CCAAACTGTTCCTGCCCTCACGGGTTCCAGTTGCTATTTTTTTCGCGAGA
CCGACAGCAATGTATCACTCTCTCGGGGCCAGCGAAAGCTTGCCGGTAGT
CTCCACAAGCGAAGGTCACGGTGGTCTCCAAACTGTTCCTGCCCTCACGG
AACATCTATCGAAGGCAAGATGGCGTGCTTGGATGTACCCCGAAGGAGCT
CACGAACTCGAGGACAAGTTCGAACATGCTTTTGGCCATGCGGCGATGGG
CGTGGCGTACGCCTACCTGTTTCAAAAGAACATCTATCGAAGGCAAGATG
GCGTGCTTGGATGTACCCCGAAGGAGCTCACGAACTCGAGGACAAGTTCG
AACATGCTTTTGGCCATGCGGCGATGGGCGTGGCGTACGCCTACCTGTTT
CAAAAGGAAATGCACCGCGAAACGATGGAGATGTTCTCGCGTGGCTTGCC
ACTGTGGCAAAGACTGCTCGTACCAGTGCTTGGGCCACGAGTGATGTTTA
AAACAAGCGAGGACCTGAGGTTGACGGAGGCGATACCGGCCAATTTGAAG
ATCATTGAGAGAACCTTCGGGAAATGCACCGCGAAACGATGGAGATGTTC
TCGCGTGGCTTGCCACTGTGGCAAAGACTGCTCGTACCAGTGCTTGGGCC
ACGAGTGATGTTTAAAACAAGCGAGGACCTGAGGTTGACGGAGGCGATAC
CGGCCAATTTGAAGATCATTGAGAGAACCTTCGGGCTCGTGGAGAGCATT
CTTTCTGACGGGAGGCCTTACCTGTGTGGCGACAGCATCAGCTTGGCAGA
TATCACCTTCGCATCCCTAGCGTTCCCGGTTATTCTCCCTGAGGAGACTG
CCAGCGTGTTCGTGGCTTACGACCCGCGGTCCCTTCCCCGAGGATACGTG
GAAATCATCAAGAGGCTCGTGGAGAGCATTCTTTCTGACGGGAGGCCTTA
CCTGTGTGGCGACAGCATCAGCTTGGCAGATATCACCTTCGCATCCCTAG
CGTTCCCGGTTATTCTCCCTGAGGAGACTGCCAGCGTGTTCGTGGCTTAC
GACCCGCGGTCCCTTCCCCGAGGATACGTGGAAATCATCAAGAGCCTGCG
CTCTCGGGAAGGTGGGCTTTTTGCTCTTCGCCTGTACCGCCATAAGCGAT
CCCGGAAAGGAGGAGCAACGGGGAAGCCTGTTGTCCGCTCGCCGCGCAGA
GGGCGTAGCTTCACCCTCAAGAAGAACGTCAACAGCCTGCGCTCTCGGGA
AGGTGGGCTTTTTGCTCTTCGCCTGTACCGCCATAAGCGATCCCGGAAAG
GAGGAGCAACGGGGAAGCCTGTTGTCCGCTCGCCGCGCAGAGGGCGTAGC
TTCACCCTCAAGAAGAACGTCAACAGCCCTTCGAGGATCACGGCACGCGA
GCGAGGAGACCGACGGGCCACAATTACACAGGCTACACGCGCCGCACCGC
AACTCCCGCGGGTTGCTCCCAAGCACAGAGCGAGCTTCGCAGCGTAGCCC
TTCGAGGATCACGGCACGCGAGCGAGGAGACCGACGGGCCACAATTACAC
AGGCTACACGCGCCGCACCGCAACTCCCGCGGGTTGCTCCCAAGCACAGA
GCGAGCTTCGCAGCGTAG
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