mRNA_L-elsbetiae_contig1528.3745.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A6H5KET7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET7_9PHAE) HSP 1 Score: 454 bits (1169), Expect = 1.620e-148 Identity = 217/265 (81.89%), Postives = 237/265 (89.43%), Query Frame = 1 Query: 163 VFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKD-DGAPAWIVDKMRELRPIVETGYENILLVRLLIEERLGLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALLDHAGIEVPLDRIFGLGTGPKAGVLADLLAKHSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLIGTGEIAGLL 954 VFAFDFDGVICNSQGESSRSGFRAL LWPE+ +LR K GG+KD D APAWI+DKM+ELRPIVETGYENILLVRLLIEERLGLP YPSE L + WGPEARD LA+RYGL RE+LVDAFGSARD+W+E DFQGWLGAN FYE IPEAISAC GEVYV+TTKQTRFASALL+HAGI+VPLDRIFGLGTGPKA VLA L KHSG T+VF EDRVETLEAVCADSKL+GVRLYLCDWGFNT QRARGE+N R+T++GTG+IAGLL Sbjct: 31 VFAFDFDGVICNSQGESSRSGFRALRVLWPEIAAELRTKDGGQKDSDDAPAWILDKMKELRPIVETGYENILLVRLLIEERLGLPVLYPSEGLLDSWGPEARDALALRYGLGREELVDAFGSARDEWMEVDFQGWLGANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAGIKVPLDRIFGLGTGPKASVLAQLQTKHSGCTLVFLEDRVETLEAVCADSKLDGVRLYLCDWGFNTVAQRARGESNDRITVVGTGDIAGLL 295
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: D8LNX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX0_ECTSI) HSP 1 Score: 369 bits (947), Expect = 9.310e-116 Identity = 193/286 (67.48%), Postives = 214/286 (74.83%), Query Frame = 1 Query: 163 VFAFDFDGV--ICNSQGESSRSGF-RALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEE-------------------RLGLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALLDHAGIEVPLDRIFGLGTGPKAGVLADLLAKHSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLIGTGEIAGLL 954 VFAFDFDG + S+ G + ++ W + I+DKM+ELRPIVETGYENILLVRLLIEE RLGLP YPSE LF+ WGPEARD LA+RY LSRE+LVDAFGSARD+W+E DFQGWLGAN FYE IPEAISACEGEVYV+TTKQTRFASALL+HAGI+VPLDRIFGLGTGPKAGVLA L KHSG T+VF EDRVETLEAVCADSKLEGVRLYLCDWGFNTA QRARGE+N RVT++GTG+IAGLL Sbjct: 31 VFAFDFDGTPPVATSKTAFPPVGAGQLIDATWHVLSS-----------------ILDKMKELRPIVETGYENILLVRLLIEESRKSRGEQRLSTKSSSTMPRLGLPVLYPSEGLFDSWGPEARDALALRYDLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAGIKVPLDRIFGLGTGPKAGVLAQLQTKHSGCTLVFLEDRVETLEAVCADSKLEGVRLYLCDWGFNTAAQRARGESNGRVTVVGTGDIAGLL 299
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A835YJR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJR6_9STRA) HSP 1 Score: 278 bits (710), Expect = 9.720e-82 Identity = 139/265 (52.45%), Postives = 181/265 (68.30%), Query Frame = 1 Query: 163 VFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERLGLPT--------PYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYE--SIPEAISACEGEVYVVTTKQTRFASALLDHAGIEVPLDRIFGLGTGPKAGVLADLLAKHSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLI 927 V A DFDGV+CNS GESSRS F L+ +P++++ ++ +D APAW++DKMR+LRP+VETGYENILL RLL+EE T P + WG E +D L +YG ++++LV AFG RD+WI D + WL AN+FYE + +A + VY++TTKQTRFA ALL HAGIEVP D+++GLG+GPK VLADL+AKH + V F EDRVETLE +C D +L V L+L +WGFN A QR RGEANPR+ +I Sbjct: 13 VVALDFDGVLCNSVGESSRSAFLCLQKRYPDVLKGTEWEN--LEDSDAPAWLMDKMRKLRPVVETGYENILLTRLLLEEYRMAETSGKETGTRPLTVGEIAANWGEELKDTLMRKYGYTQDELVHAFGDTRDEWIARDEESWLEANSFYERLGVRDAARYSKANVYIITTKQTRFAEALLKHAGIEVPEDKVYGLGSGPKRDVLADLIAKHPKAQVHFVEDRVETLEGICKDERLGAVHLHLANWGFNNADQRQRGEANPRIEVI 275
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: UPI001C52BC0F (uncharacterized protein LOC122059247 isoform X1 n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C52BC0F) HSP 1 Score: 232 bits (591), Expect = 1.840e-65 Identity = 118/268 (44.03%), Postives = 164/268 (61.19%), Query Frame = 1 Query: 160 DVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERLG--------LPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALLDH-AGIEVPLDRIFGLGTGPKAGVLADLLAK--HSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLIG 930 D++A DFDGVIC+S GESS S F+A + WP + + + D +WI+D+M +RP+VETGYEN+LLVRLL+E R+ + ++ + E W + + + + +RE LV+ FG RD+WIE D W+GAN FY + +A+ VY+VTTKQ RFA ALL AG+ +P DRI+GLGTGPK VL L AK H G T+ F EDR+ TL+ V +++L+G LYL DWG+NT +R PR+ L+G Sbjct: 3 DLYALDFDGVICDSCGESSVSAFKAAKLRWPHLFDSV--------DSATESWIIDQMHVVRPVVETGYENVLLVRLLLETRMPTIRKSSVHVAAELTNDGILENWS-KLKPVILEEWNENRESLVELFGKVRDEWIEKDLSSWIGANRFYPGVSDALKFASSRVYIVTTKQGRFADALLQELAGVTMPSDRIYGLGTGPKVEVLKQLQAKPEHQGLTLHFVEDRLATLKNVIKETELDGWNLYLGDWGYNTQKEREDAATIPRINLLG 261
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A1S4BME9_TOBAC (uncharacterized protein LOC107809854 n=3 Tax=Nicotiana TaxID=4085 RepID=A0A1S4BME9_TOBAC) HSP 1 Score: 227 bits (579), Expect = 7.740e-64 Identity = 114/274 (41.61%), Postives = 167/274 (60.95%), Query Frame = 1 Query: 160 DVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERL------GLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALL-DHAGIEVPLDRIFGLGTGPKAGVLADL--LAKHSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLIGTGEIAGLL 954 D++A DFDGV+C+S GESS S +A + WP + + D WIVD+M +RP+VETGYEN+LLVRLL+E R+ + E + E W + + + + R+ L+D FG RD+W++ D W+G N FY +P+A+ ++Y+VTTKQ+RFA ALL + AGI +P++RI+GLGTGPK VL L + +H G T+ F EDR+ TL+ V +S+L+G LYL DWG+NT +R + PR+ L+G + + L Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPSLFNGV--------DSSLEDWIVDQMHVVRPVVETGYENLLLVRLLLETRIPSIRKSSVAEGLTVEGILENWA-KIKPIIVAEWNEDRDSLIDLFGKVRDEWMDNDLATWIGTNRFYPGVPDALKFASSKLYIVTTKQSRFADALLRELAGITIPVERIYGLGTGPKVKVLKQLQEMPEHQGLTLHFVEDRLATLKNVIKESELDGWNLYLGDWGYNTQKEREEAASIPRIRLLGLSDFSNKL 267
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A6P8DGG4_PUNGR (uncharacterized protein LOC116204475 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DGG4_PUNGR) HSP 1 Score: 226 bits (576), Expect = 2.060e-63 Identity = 117/265 (44.15%), Postives = 162/265 (61.13%), Query Frame = 1 Query: 160 DVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERL------GLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALL-DHAGIEVPLDRIFGLGTGPKAGVLADLLAK--HSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLI 927 D++A DFDGV+C+S GESS S +A + WP + + G D W+V +M +RP+VETGYEN+LLVRLL+E R+ + + + E W + + + +G +RE L+D FG RDDWIE D W+GAN FY IP+A+ ++Y+VTTKQ+RFA ALL + AG+ +P +RIFGLGTGPK VL L K H G + F EDR+ TL+ V D +L+G LYL DWG+NT +R + PR+ L+ Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPSLFD-------GVVDSATEDWVVQQMYTVRPVVETGYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILENW-VKIKPVILEEWGENREALIDLFGKVRDDWIEKDLATWIGANRFYPGIPDALQFASSKLYIVTTKQSRFADALLRELAGVTIPPERIFGLGTGPKVEVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKDPELDGWNLYLGDWGYNTKKEREEAASIPRIQLL 259
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A6S9KLT1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLT1_HETAK) HSP 1 Score: 229 bits (584), Expect = 3.620e-63 Identity = 128/303 (42.24%), Postives = 180/303 (59.41%), Query Frame = 1 Query: 163 VFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAK-SGGEKDDGA--------------------PAWIVDKMRELRPIVETGYENILLVRLLIEERL-GLPT-------PYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALLDHAGIEVPLDRIFGLGTGPKAGVLADLLAKHSGS------TVVFF-EDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLIGTGEIAGLLGSA 963 ++AFDFDGVIC+S+GE+ S F+A++ WPE+V Q+ A+ + G K G P W+ KMR LRP+VETGYEN+LL RL IEE + + T P + W + + L RY E+L++ FG+ RD WI +DF+GWLGAN+FY + +A++ C + Y++TTK RFA LL++AG D+I+GLG+GPKA LA LL K++ TV+ F ED+VETLE +C D +L+ VRLY +WG++T Q+ +ANPRVT I E L +A Sbjct: 68 IYAFDFDGVICDSEGETCLSAFKAIQAYWPEVVHQVPAEMAAGPKKIGTRTLKWPDSVDAAEPVALTECPDWLKVKMRALRPVVETGYENMLLERLCIEEEIMSIRTKDTTKSRPLTVAEIIANWD-DLKANLMRRYDARVEELIEVFGTTRDSWIASDFEGWLGANSFYPVL-DAVNNCTCDKYIITTKDKRFAYKLLENAGCPFEEDKIYGLGSGPKADTLAMLLDKYNSDAPDGEKTVIHFVEDKVETLEKICKDPRLDEVRLYFANWGYSTPSQKQIAKANPRVTCINAIEFMELTSAA 368
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A834YEF3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YEF3_9MAGN) HSP 1 Score: 224 bits (572), Expect = 7.530e-63 Identity = 117/267 (43.82%), Postives = 163/267 (61.05%), Query Frame = 1 Query: 160 DVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERL--------GLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALL-DHAGIEVPLDRIFGLGTGPKAGVLADLLAK--HSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLI 927 D++A DFDGVIC+S GESS S +A + WP + + + D AWIVD+M +RP+VETGYEN+LLVRLL+E R+ G+ + + E W + + + + R+ LV+ FG RD+WI+ D W+GAN FY + +A+ VY+VTTKQ+RFA ALL + AG+ +P DRI+GLGTGPK VL L +K H G T+ F EDR+ TL+ V D +L+G LYL DWG+NT +R + PR+ L+ Sbjct: 3 DLYALDFDGVICDSCGESSLSAVKAAKLRWPRLFDGV--------DSTIEAWIVDQMHIVRPVVETGYENLLLVRLLLEIRVPSIRKSSVGVAAGLTIKEILENWS-KLKPVIMEEWDEKRDDLVELFGKVRDEWIDNDLSSWIGANRFYPGVSDALKFASSRVYIVTTKQSRFADALLRELAGVTIPSDRIYGLGTGPKVEVLKQLQSKPEHQGLTLHFVEDRLATLKNVIKDPELDGWNLYLGDWGYNTHKEREEAASIPRIHLL 260
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A2Z7BS53_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BS53_9LAMI) HSP 1 Score: 224 bits (571), Expect = 8.280e-63 Identity = 110/260 (42.31%), Postives = 162/260 (62.31%), Query Frame = 1 Query: 160 DVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEERL-GLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALL-DHAGIEVPLDRIFGLGTGPKAGVLADL--LAKHSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLI 927 D++A DFDGV+C+S GESS S +A + WP + E + D WIVD+M +RP+VETGYEN+LLVRLL+E ++ + E + E W + + + + R+ L+D FG RD+WI+ D GW+GAN FY +P+A+ ++Y+VTTKQ+RFA ALL + AG+ +PL+R++GLGTGPK VL L + +H G + F EDR+ L+ V + +L+ LYL DWG+NT +R + PR+ L+ Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPSLFEAV--------DSSLEGWIVDQMYIVRPVVETGYENLLLVRLLVEMKIPSVAEGLTIEGILENWF-QIKPVIMAEWDEKRDPLIDLFGKVRDEWIDNDLTGWIGANRFYPGVPDALKFASSKLYIVTTKQSRFADALLRELAGVTIPLERVYGLGTGPKVEVLKKLQNMPEHQGLALHFVEDRIAALKNVIKEPELKNWNLYLGDWGYNTQKEREEAQGIPRIHLL 253
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Match: A0A0K9P2V8_ZOSMR (HAD superfamily hydrolase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P2V8_ZOSMR) HSP 1 Score: 222 bits (565), Expect = 7.060e-62 Identity = 116/268 (43.28%), Postives = 162/268 (60.45%), Query Frame = 1 Query: 157 TDVFAFDFDGVICNSQGESSRSGFRALETLWPEMVEQLRAKSGGEKDDGAPAWIVDKMRELRPIVETGYENILLVRLLIEER--------LGLPTPYPSEALFEIWGPEARDKLAVRYGLSREQLVDAFGSARDDWIETDFQGWLGANTFYESIPEAISACEGEVYVVTTKQTRFASALLDH-AGIEVPLDRIFGLGTGPKAGVLADLLAK--HSGSTVVFFEDRVETLEAVCADSKLEGVRLYLCDWGFNTAVQRARGEANPRVTLI 927 T ++A DFDGV+C+S GES+ S +A + WPE+ E++ D WI+D+M LRP+VETGYEN+LLVRLL+E R + E + E W E + L + E LV+ FG RD+WI+ D GW+GAN Y I +A+ E+Y+VTTKQ+RFA ALL AGI +P RI+GLG+GPK VL + K H G + F EDR++TL+ V + +L+G +YLC+WG+NTA +R E+ PR+ L+ Sbjct: 3 THLYALDFDGVLCDSCGESATSALKAAKIRWPELFERM--------DSSVDEWIIDQMHILRPVVETGYENLLLVRLLMEIRFPPIRRSSVSSSAGLTVEMILENWA-ELKPGLMKDWKEESEPLVNLFGKVRDEWIDKDLAGWIGANRLYPGIADALKFASSELYIVTTKQSRFADALLQQLAGITLPPHRIYGLGSGPKVQVLKQIQRKPEHKGLSFHFVEDRLKTLKNVVQEPELDGWNIYLCNWGYNTANERIEAESIPRIQLL 261 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1528.3745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1528.3745.1 >prot_L-elsbetiae_contig1528.3745.1 ID=prot_L-elsbetiae_contig1528.3745.1|Name=mRNA_L-elsbetiae_contig1528.3745.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp MAQQRRPQQSPPVEAQQQLRHGQSRAASATAAAGGPSAGGEATDVFAFDFback to top mRNA from alignment at L-elsbetiae_contig1528:7436..16592+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1528.3745.1 ID=mRNA_L-elsbetiae_contig1528.3745.1|Name=mRNA_L-elsbetiae_contig1528.3745.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9157bp|location=Sequence derived from alignment at L-elsbetiae_contig1528:7436..16592+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1528:7436..16592+ >mRNA_L-elsbetiae_contig1528.3745.1 ID=mRNA_L-elsbetiae_contig1528.3745.1|Name=mRNA_L-elsbetiae_contig1528.3745.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1932bp|location=Sequence derived from alignment at L-elsbetiae_contig1528:7436..16592+ (Laminarionema elsbetiae ELsaHSoW15)back to top |