mRNA_L-elsbetiae_contig1520.3712.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI) HSP 1 Score: 228 bits (581), Expect = 7.970e-66 Identity = 132/180 (73.33%), Postives = 143/180 (79.44%), Query Frame = 1 Query: 7 SRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLRARLGALLSGALVEAEKRKG--GAGGLSDSGGG----TSTGTRGRSHRPSVDRDGGATQMQDEXXXXXXXTLLQDLPPLLLMARRAWLDGGHLGG 528 SRGAAA+AGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTS+DASLILFDHWLLVEMRGRDPAL GQKLL+VACGLRARLGALLS ALVEAE+RKG G GG GGG ++T T G S R + ++G +LQDLPPLLLMARRAW+DGG LGG Sbjct: 1201 SRGAAANAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLILFDHWLLVEMRGRDPALNGQKLLVVACGLRARLGALLSEALVEAERRKGTGGGGGRGFPGGGVRDQSATATTGDSRRGTRGQEG-------------DDLMLQDLPPLLLMARRAWVDGGRLGG 1367
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A6H5K0I2_9PHAE (OB_NTP_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I2_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.250e-64 Identity = 128/175 (73.14%), Postives = 136/175 (77.71%), Query Frame = 1 Query: 7 SRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLRARLGALLSGALVEAEKRKGGAGGLSDSGGGTSTGTRGRSHRPSV--DRDGGATQMQDEXXXXXXXTLLQDLPPLLLMARRAWLDGGHLG 525 SRGAAA+AGRGDGLLCYGQLMETQRPFVSSVTPLPALQ LLLFSARVDTS+DASLILFDHWLLVEMRGRDPAL GQKLL VACGLRARL ALLSGALVEAE+RKG G D GG G R + + + R G Q D +LQDLPPLLLMARRAW+DGG LG Sbjct: 241 SRGAAANAGRGDGLLCYGQLMETQRPFVSSVTPLPALQTLLLFSARVDTSEDASLILFDHWLLVEMRGRDPALNGQKLLAVACGLRARLDALLSGALVEAERRKGTGG---DGGGFPGGGVRDQRAKTTTGDSRRGVRGQEGDHL-------MLQDLPPLLLMARRAWVDGGRLG 405
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A7S4D4B5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4B5_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 1.030e-13 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 25 DAGRGDG-LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLRARL 273 D GRG+G L+ Y +L+ETQ+ ++S +TPLPA+ ALLL S +DTS+D ++FDHWL V R A +++L AC LRA L Sbjct: 96 DKGRGEGELVLYAELVETQKAYLSGITPLPAIPALLLSSRHIDTSEDCKHMMFDHWLHVSFESRSFA---KRILSTACQLRALL 176
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A1Y1V2I2_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V2I2_9FUNG) HSP 1 Score: 63.2 bits (152), Expect = 2.670e-8 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 46 LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLR 264 LLCY L+ETQ+P++ +V +PALQA LLFS ++DT+ D + I+ D WLL+ + A +K LI++ LR Sbjct: 1031 LLCYQSLLETQKPYLVNVVRVPALQACLLFSKKIDTNLDLTRIVVDDWLLLSFTDQKEA---EKSLILSNWLR 1100
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A0G4F325_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F325_VITBC) HSP 1 Score: 62.8 bits (151), Expect = 3.600e-8 Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 49 LCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLR 264 L YG L++T +PFV+ VTP+P L LL+ ++RVDT++D SL++FD W+ V + Q +L+VA LR Sbjct: 1013 LVYGSLLQTYKPFVTHVTPVPLLPLLLMAASRVDTNEDFSLLIFDGWIQVMLT--------QPMLVVAPLLR 1076
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A1Y1XDI1_9FUNG (OB_NTP_bind domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XDI1_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 1.460e-7 Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 46 LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLR 264 LLCY L+ETQRP++ + +PALQA LLFS ++DT+ D + ++ D WLL+ A ++ LI++ LR Sbjct: 198 LLCYQNLLETQRPYLVNCVRVPALQACLLFSKKIDTNLDLTKMVIDDWLLLTFMDNKEA---ERALIISNWLR 267
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A1Y1X1C2_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X1C2_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 1.660e-7 Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 46 LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLR 264 LLCY L+ETQRP++ + +PALQA LLFS ++DT+ D + ++ D WLL+ A ++ LI++ LR Sbjct: 1061 LLCYQNLLETQRPYLVNCVRVPALQACLLFSKKIDTNLDLTKMVIDDWLLLTFMDNKEA---ERALIISNWLR 1130
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A8J9WKD3_9CHLO (Probable ATP-dependent RNA helicase DHX34 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKD3_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 5.560e-7 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 46 LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLRARLGALLS 288 +L Y +L++T+R F+S++TPLPAL ALLL + RVD AS L D WLL+ M +G ++ + LRA+ ALL+ Sbjct: 893 VLAYVELLDTRRSFLSNLTPLPALPALLLTADRVDADMAASRFLVDGWLLLRMHDG----SGPQVAVEINRLRAQTSALLN 969
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A7S1X984_9CHLO (RNA helicase (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X984_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 1.090e-6 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 55 YGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRD 216 Y + +ET+ F+ + TP+PAL ALLL +ARVDTS D S ++ D WLL+ ++G D Sbjct: 61 YVEALETRALFLCNNTPVPALPALLLSAARVDTSLDGSRMVVDRWLLLRIQGDD 114
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Match: A0A3P8GL13_9TREM (OB_NTP_bind domain-containing protein n=2 Tax=Echinostoma caproni TaxID=27848 RepID=A0A3P8GL13_9TREM) HSP 1 Score: 57.0 bits (136), Expect = 1.150e-6 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 46 LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSDDASLILFDHWLLVEMRGRDPALTGQKLLIVACGLRARLGALLSGALVEAEKRK 318 LL Y LMET RPF+ + +PAL LLL+S +DT+++A+ I+FD WL V + + A Q+ L LR L L+ L +K Sbjct: 123 LLMYLDLMETTRPFLVNTLRVPALPTLLLYSREIDTNENATRIVFDSWLEVNLVDIEAA---QRALATVIWLRTLLDRLMELQLTSMSNQK 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1520.3712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1520.3712.1 >prot_L-elsbetiae_contig1520.3712.1 ID=prot_L-elsbetiae_contig1520.3712.1|Name=mRNA_L-elsbetiae_contig1520.3712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp AHSRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDback to top mRNA from alignment at L-elsbetiae_contig1520:13444..14308+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1520.3712.1 ID=mRNA_L-elsbetiae_contig1520.3712.1|Name=mRNA_L-elsbetiae_contig1520.3712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=865bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:13444..14308+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1520:13444..14308+ >mRNA_L-elsbetiae_contig1520.3712.1 ID=mRNA_L-elsbetiae_contig1520.3712.1|Name=mRNA_L-elsbetiae_contig1520.3712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:13444..14308+ (Laminarionema elsbetiae ELsaHSoW15)back to top |