mRNA_L-elsbetiae_contig1518.3700.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1518.3700.1
Unique NamemRNA_L-elsbetiae_contig1518.3700.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A6H5KQ50_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ50_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.190e-152
Identity = 228/262 (87.02%), Postives = 238/262 (90.84%), Query Frame = 1 
Query:  994 TPPVGGPTLDFGCGTGCLTMALRDDLGE-VTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGAFGTGHEFTLLAATCVRKAEGAVEKAARRSSAAAEAERSEGCLACKQQHREVEYECVPCGCHAFCRGCAMKVATGGRCKRCKNMFTDLKRLR 1776
            TPP+ GPTLDFGCGTGCLTMALRDDLGE VTGVDTSRAML+QFDRKA  RG VTT AVELTGPGQLGEGADDSFALAYSSLTLHHIRDCER VS LAGYLRPGSGRLV+FDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCE+SG LEDL+VDRI F KGEGEDGAFGTG EFTLLAATCVRKAEGA ++ ARRSS A +   S+GCLAC +  RE EYECVPCGCHAFCRGCAMKVATGGRCKRCKNMF DLKRLR
Sbjct:   49 TPPLDGPTLDFGCGTGCLTMALRDDLGESVTGVDTSRAMLEQFDRKAEGRG-VTTVAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERTVSALAGYLRPGSGRLVLFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCESSGMLEDLSVDRIGFSKGEGEDGAFGTGREFTLLAATCVRKAEGAEQREARRSSIAGDL--SDGCLACNR--REAEYECVPCGCHAFCRGCAMKVATGGRCKRCKNMFVDLKRLR 305
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A812PF38_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PF38_9DINO)

HSP 1 Score: 108 bits (270), Expect = 5.480e-23
Identity = 73/185 (39.46%), Postives = 98/185 (52.97%), Query Frame = 1 
Query: 1009 GPTLDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGP-GQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKG--EGEDGAFGTGHEFTLLAATCVRK 1554
            G  LDFGCGTG L+  L+D    VTG+D S  ML     K  E  G+++  V   GP   LG     SF    S L +HHIRDC+  +S LA +L P +GR+VV D EAT++A  FH      G+  EH G+    L  W  ++G L+ + V R+ F K   EG + A G    F +L A+  R+
Sbjct:   69 GRCLDFGCGTGLLSFELKDSCSHVTGLDASSGMLKVMQEKI-ETAGLSSKMVATQGPLNVLG-----SFDTIVSLLCIHHIRDCKAQLSELATHLSP-TGRIVVIDFEATQNARLFHKKSETRGDHYEHDGLEADALHGWLTSAG-LQSVEVHRVPFEKARAEGWEDA-GCKETFQMLLASGSRE 244
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: UPI001FAE929D (class I SAM-dependent methyltransferase n=2 Tax=unclassified Geothrix TaxID=2647902 RepID=UPI001FAE929D)

HSP 1 Score: 91.3 bits (225), Expect = 2.190e-17
Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDR 1467
            LDFG GTG +T+AL   +G +TG DTS  ML Q   KAG  G +      L G G LG   D    L  SS+TLHH+ D    +  LA +L PG GR+ + DLE  + +  FH  D    + + H G   +D+ AW EA+G L D+ V R
Sbjct:   44 LDFGAGTGLVTLALAPHVGRMTGADTSEGMLAQLAAKAGALG-LPVEVRRLDGAGDLGGPYD----LIVSSMTLHHVVDVPALLVQLARHLAPG-GRIALADLEPEDGS--FHGED---ASDVHHLGFEPADIAAWLEAAG-LRDVAVAR 181
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A7I702_METB6 (Methyltransferase type 11 n=1 Tax=Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) TaxID=456442 RepID=A7I702_METB6)

HSP 1 Score: 88.6 bits (218), Expect = 2.200e-16
Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERG-GVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGAFGTGHEFTLLAATCVRKA 1557
            LDFGCGTG L++AL   +  VT VD+SR MLD  D+K   +G  + TA V+L    + G+       L  SS+T HH+RD    +  +A  LRPG GR+ + DL++ E   KFH +       + H+G     ++ + EA+G            HK     GA G    FT+   T  +KA
Sbjct:   45 LDFGCGTGLLSLALLPGVRSVTAVDSSRGMLDVLDKKIAAQGLAMRTALVDL----EKGDKLPGPVDLVTSSMTFHHLRDPVPVLVEMARILRPG-GRIAIADLDSDEG--KFHDSS----EGVFHNGFDRCTMQKYFEAAGFTAVQNRTAAVMHK----TGADGKTRTFTIFLMTAQKKA 210
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A2N2GHF4_9DELT (SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-6 TaxID=2013756 RepID=A0A2N2GHF4_9DELT)

HSP 1 Score: 84.3 bits (207), Expect = 6.270e-15
Identity = 59/162 (36.42%), Postives = 88/162 (54.32%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGA 1503
            LDFGCGTG L +AL+  +  +TGVD+SR MLD F RK  +RG +T  + +     Q G+    S+ L  SS+TLHHI++ +  +      LRP SG L + DL+A  +  +FHP +    + + H G    ++R     +G   D+ V +    +   EDGA
Sbjct:   45 LDFGCGTGLLALALQPLVHAITGVDSSRGMLDVFHRKISDRG-LTNVSAQYLDLDQ-GDVLTGSYHLVVSSMTLHHIKNVDSLLRQFHQILRP-SGMLCIADLDA--EGGRFHPDN----DGVFHFGFDREEMRRLFAQAG-FHDIRVTQAAQVEKPVEDGA 196
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A6S6M2Y5_9DELT (Methyltransferase n=2 Tax=Citrifermentans TaxID=2883512 RepID=A0A6S6M2Y5_9DELT)

HSP 1 Score: 84.3 bits (207), Expect = 6.400e-15
Identity = 59/162 (36.42%), Postives = 88/162 (54.32%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGA 1503
            LD+GCG+G +T+ L+  +G +TG D+S+ ML+  +RK  E+G +    ++L    Q  +  D S+ L  SS+TLHH++D    V++LA  L+PG G L + DLE TE+   FH         + HHG   + L      +G  E   V      K +GEDGA
Sbjct:   47 LDYGCGSGLVTLGLQPLVGRITGADSSKGMLEVLERKL-EQGKIENVTLQLLDLEQ--QSLDASYDLITSSMTLHHVQDVPALVASLAAALKPG-GWLALADLE-TENG-SFHSDS----KGVLHHGFSRAFLAGEFSKNGLREVRVVTAAVIEK-KGEDGA 197
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A1V4ZHF4_9EURY (Methyltransf_25 domain-containing protein n=2 Tax=unclassified Methanoregula TaxID=2649730 RepID=A0A1V4ZHF4_9EURY)

HSP 1 Score: 84.0 bits (206), Expect = 1.560e-14
Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASG--TLEDLTV 1461
            LDFGCGTG LT+ L+  +  +TGVD+S+ ML  FD K  ++G +T A        + G+  D  + L  SS+T HHIRD    +  +AG LRP SG++ V DL+   D  KFH ++  +     H G   S ++   EA G  ++ D T 
Sbjct:   73 LDFGCGTGLLTLHLQPLVRSITGVDSSQGMLAVFDGKIRKQG-ITNARTRFADLNK-GDMPDGRYDLVISSMTFHHIRDIPHLLKMMAGVLRP-SGQIAVIDLDP--DGGKFHSSNAGVF----HFGFERSVMKDLLEAEGFVSVRDRTA 213
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A8J7S8L7_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Geomesophilobacter sediminis TaxID=2798584 RepID=A0A8J7S8L7_9DELT)

HSP 1 Score: 82.4 bits (202), Expect = 2.600e-14
Identity = 53/159 (33.33%), Postives = 77/159 (48.43%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERG--GVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGE 1488
            LD+GCG+G +T+ L   +  +TG D+S+ MLD  D K  ERG   VTT  ++L    +  E     + L  SS+T+HH++D E  V +L   L PG G L + DLE  + +       F     +EH+G          + +G  E   V      KGE
Sbjct:   46 LDYGCGSGLVTLGLHGFVSRITGADSSQGMLDVLDAKVAERGIDNVTTLHIDL----EHQEAIPGKYDLIVSSMTMHHVKDVEGLVQSLVASLNPG-GWLALADLEKEDGS-------FHADTVVEHNGFEREFFPGTFQRAGLSEIGVVTAAVVEKGE 192
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BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: UPI001C1031A8 (methyltransferase domain-containing protein n=1 Tax=Geomonas TaxID=2651583 RepID=UPI001C1031A8)

HSP 1 Score: 82.4 bits (202), Expect = 2.890e-14
Identity = 62/164 (37.80%), Postives = 89/164 (54.27%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERG--GVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGA 1503
            LD+GCG+G +T+ L   +G +TG D+SR MLD  D+K   +G   V+T  ++L        G + SF L  SS+TLHH++D    +++L+  L+PG G L + DL ATED  +FH  D   G  + HHG     L     A   L D++V        +G DGA
Sbjct:   46 LDYGCGSGLVTLGLHPFIGRITGADSSRGMLDVLDKKIQAQGLDNVSTMLLDLEK-----HGLEGSFDLIVSSMTLHHVQDVPSLIASLSMALKPG-GWLALADL-ATEDG-RFH--DDPTG--VLHHGFSGEFLSGEF-ARNALVDVSVVTAAAVDKKGADGA 196
[Close]
BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Match: A0A6V8MSM0_9DELT (Methyltransferase n=3 Tax=Geomonas TaxID=2651583 RepID=A0A6V8MSM0_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 3.930e-14
Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = 1 
Query: 1018 LDFGCGTGCLTMALRDDLGEVTGVDTSRAMLDQFDRKAGERG--GVTTAAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGAFGTGHEFTLL 1533
            LD+GCG+G +T+ L+  +G +TG D+S  ML+  +RK   +G   VTT  ++L       +  +  F L  SS+TLHH++D    V+TL+  L+PG G L + DLE+ ED  +FH  D   G  + HHG     L     A+G  E   V      K     GA GT   + +L
Sbjct:   46 LDYGCGSGLVTLGLQPHVGHITGADSSAGMLEVLNRKIQAQGLANVTTLPLDLEH-----QHLEGGFDLIVSSMTLHHVQDVPALVATLSHALKPG-GWLALADLES-EDG-RFH--DDSTG--VLHHGFSREFLTGEFAANGLAEVAVVTAAVIDK----PGADGTPRRYPVL 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1518.3700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ50_9PHAE1.190e-15287.02Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A812PF38_9DINO5.480e-2339.46Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
UPI001FAE929D2.190e-1741.33class I SAM-dependent methyltransferase n=2 Tax=un... [more]
A7I702_METB62.200e-1635.36Methyltransferase type 11 n=1 Tax=Methanoregula bo... [more]
A0A2N2GHF4_9DELT6.270e-1536.42SAM-dependent methyltransferase n=1 Tax=Deltaprote... [more]
A0A6S6M2Y5_9DELT6.400e-1536.42Methyltransferase n=2 Tax=Citrifermentans TaxID=28... [more]
A0A1V4ZHF4_9EURY1.560e-1438.00Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A8J7S8L7_9DELT2.600e-1433.33Class I SAM-dependent methyltransferase n=1 Tax=Ge... [more]
UPI001C1031A82.890e-1437.80methyltransferase domain-containing protein n=1 Ta... [more]
A0A6V8MSM0_9DELT3.930e-1435.63Methyltransferase n=3 Tax=Geomonas TaxID=2651583 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1518contigL-elsbetiae_contig1518:4660..11597 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeArchaea
Seed ortholog score88.2
Seed ortholog evalue7.9e-15
Seed eggNOG ortholog456442.Mboo_0995
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2NB4B@224756,2Y71Z@28890,COG0500@1,arCOG02702@2157
COG Functional cat.Q
Best tax levelMethanomicrobia
Best eggNOG OGNA|NA|NA
Exons6
Model size1804
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1518.3700.1prot_L-elsbetiae_contig1518.3700.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1518 5446..11572 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.8626297-UTR-L-elsbetiae_contig1518:4659..54451622815617.8626297-UTR-L-elsbetiae_contig1518:4659..5445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1518 4660..5445 +
1691682994.232535-UTR-L-elsbetiae_contig1518:4659..54451691682994.232535-UTR-L-elsbetiae_contig1518:4659..5445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1518 4660..5445 +
1622815617.9446084-UTR-L-elsbetiae_contig1518:11572..115971622815617.9446084-UTR-L-elsbetiae_contig1518:11572..11597Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1518 11573..11597 +
1691682994.303817-UTR-L-elsbetiae_contig1518:11572..115971691682994.303817-UTR-L-elsbetiae_contig1518:11572..11597Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1518 11573..11597 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.8753667-CDS-L-elsbetiae_contig1518:5445..58261622815617.8753667-CDS-L-elsbetiae_contig1518:5445..5826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 5446..5826 +
1691682994.2431722-CDS-L-elsbetiae_contig1518:5445..58261691682994.2431722-CDS-L-elsbetiae_contig1518:5445..5826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 5446..5826 +
1622815617.885691-CDS-L-elsbetiae_contig1518:6564..67681622815617.885691-CDS-L-elsbetiae_contig1518:6564..6768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 6565..6768 +
1691682994.2517877-CDS-L-elsbetiae_contig1518:6564..67681691682994.2517877-CDS-L-elsbetiae_contig1518:6564..6768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 6565..6768 +
1622815617.8954434-CDS-L-elsbetiae_contig1518:8070..81971622815617.8954434-CDS-L-elsbetiae_contig1518:8070..8197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 8071..8197 +
1691682994.2681162-CDS-L-elsbetiae_contig1518:8070..81971691682994.2681162-CDS-L-elsbetiae_contig1518:8070..8197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 8071..8197 +
1622815617.9056628-CDS-L-elsbetiae_contig1518:8982..90871622815617.9056628-CDS-L-elsbetiae_contig1518:8982..9087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 8983..9087 +
1691682994.2768822-CDS-L-elsbetiae_contig1518:8982..90871691682994.2768822-CDS-L-elsbetiae_contig1518:8982..9087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 8983..9087 +
1622815617.918023-CDS-L-elsbetiae_contig1518:9896..100231622815617.918023-CDS-L-elsbetiae_contig1518:9896..10023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 9897..10023 +
1691682994.2861788-CDS-L-elsbetiae_contig1518:9896..100231691682994.2861788-CDS-L-elsbetiae_contig1518:9896..10023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 9897..10023 +
1622815617.9348328-CDS-L-elsbetiae_contig1518:11523..115721622815617.9348328-CDS-L-elsbetiae_contig1518:11523..11572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 11524..11572 +
1691682994.294372-CDS-L-elsbetiae_contig1518:11523..115721691682994.294372-CDS-L-elsbetiae_contig1518:11523..11572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1518 11524..11572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1518.3700.1

>prot_L-elsbetiae_contig1518.3700.1 ID=prot_L-elsbetiae_contig1518.3700.1|Name=mRNA_L-elsbetiae_contig1518.3700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
MYCSTYSTSTTSSLPVVTGRMCEPPLLFDDRQRAPPCLYLPRPSLPGKTT
TTTTTTTTTTTAAARQPWWTPPVGGPTLDFGCGTGCLTMALRDDLGEVTG
VDTSRAMLDQFDRKAGERGGVTTAAVELTGPGQLGEGADDSFALAYSSLT
LHHIRDCERAVSTLAGYLRPGSGRLVVFDLEATEDAHKFHPADFELGNQL
EHHGIRESDLRAWCEASGTLEDLTVDRITFHKGEGEDGAFGTGHEFTLLA
ATCVRKAEGAVEKAARRSSAAAEAERSEGCLACKQQHREVEYECVPCGCH
AFCRGCAMKVATGGRCKRCKNMFTDLKRLR*
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mRNA from alignment at L-elsbetiae_contig1518:4660..11597+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1518.3700.1 ID=mRNA_L-elsbetiae_contig1518.3700.1|Name=mRNA_L-elsbetiae_contig1518.3700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6938bp|location=Sequence derived from alignment at L-elsbetiae_contig1518:4660..11597+ (Laminarionema elsbetiae ELsaHSoW15)
TTCGAGGTGAAGGCTGCCGGCTGGGACGACAAGCCGATAATCCGCGGCAC
GACGGACAAGATCAAGGGCTGGATCACCACCCAGGTCGGTCGCCGGTGTT
GTTTATAGAGTGAGTCAAAGCCTCGCACGCGGCTGGGTACTGCTGTTGTG
AGATAGTCTGGACGTGGAAAGGCCTATAATGTAGAGAGCGAGATAGGTTC
TCTCAGACGCGAGACCAGACAAAAGAGGAGGAAGAAAACAATACGAGTAG
TATATAGCCTATAGACATAGATACATATGTGCTGTGGCCTTGGCGACCCA
CAGGAGTGAGTTGCCTTCTGCCTGCCTCTCAACGGTTAGTGCGGGTTCCG
AAGGTGGTGGTGGGTGAAAGTCGTGACGAACTTTGTTTTGACTACAACAA
AAACACGAACAACTCAACAACCACAACAACAACATCGACAGCAACAAAAA
CTTGCACGCGGGGACAGCAAGTAGTCCGCACGGATATGGTGTGCACACAT
GCTACAGTAGCTGGATTTTTGACAAGCAGGCTTAGAGCCAAATTAGCTAC
CAAAGCAAGACCCCCATCCCCCATCCATCCTGGGGAACCTTAACCTTAAC
CTGCTATCTTCGCTTCCAAACATTTCTGAGAATACTTGCTGGGCTACTAC
TACTGTGTTCGCGCCGGAACTTCGAAGCTTCAGTCCCGAGATCCACCTCC
CTGGAGCCAAAAGGATCCCCTTTCAATGCCCTCAGCGCTCTCTCTCTCTT
CAGAGCGTCTGTTGACCGGCAAACATCGACCTATGTATGTACTGTAGTAC
ATACAGTACCTCAACAACCTCCTCCCTCCCTGTGGTCACAGGCAGGATGT
GCGAACCACCCCTACTCTTTGACGACAGACAACGTGCCCCCCCCTGCCTA
TACCTCCCTCGCCCCTCCCTCCCCGGAAAAACCACAACCACAACAACAAC
AACAACGACGACGACGACGGCGGCGGCACGGCAGCCGTGGTGGACGCCGC
CGGTGGGCGGGCCGACCCTCGACTTCGGCTGCGGCACCGGGTGCCTGACG
ATGGCGCTGAGGGACGACCTCGGAGAGGTGACGGGGGTGGACACGAGCAG
GGCGATGCTGGATCAGTTCGACAGGAAGGCCGGGGAGAGGGGCGGGGTCA
CCACGGCCGCCGTCGAGGTATGTATGTATGTATGTATGTATGTATGTATG
TACTTCTATAAGCTGCTTCTTAAACTGCTGTAATGGCGCAGACTTGAAAA
AAAGAAAAAAAGAAAAATATATGTTTCATGGTTCTTTTCTCTGGCATGTA
GGGGTGTTTCTGAAGGCTCGCCGTCGAGGTACCTACTTTTCTACAGCACA
CGTAAAGAAAAAAAGCTCCACATGAAATGTTATTTTCTCTGGCTTATGTA
GGGTTCCTGAAGGGCTGCCTGCATGTTTGGGGCTAGTTTGGTAGTTGTGT
GTCGTAGGGGCTTATGGTGGTTTCTCTATGTGTAGTTGCATGTGTACATA
CCCGAACAAACGCCTCTTTCTTTCTGTCGTCGAGTTATGTAGCTCGAGCT
GGAATCGGACTCCAGACGATCCGAAAGGAATCAAGCCTAAAAATAGGAAA
AGAGTCAGTTCGTCTAGCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGTTGCTGTTGCTGCTGCCTTTTTGGTGCACTCCTTTCGCT
GCCCCGAAACAGACACCCCTCTGCTGGGCTGCCCCCCCCCCCTCCCCCTT
GCCAACACCCCCCCTCCCGCCCTCCCTGCCCGCCTGCCTGCCCGCCTGCC
TGCCCGTCTGCCTGCCTGCCTTGGCCGCATTTCTTGACGACTTCATGCAT
GCGCCGCACCCGCACACAACAACAACAACAATGGTAACAACAACGATGTT
AACAGCTGACGGGCCCCGGGCAGCTCGGAGAAGGCGCCGACGACTCGTTC
GCCCTGGCGTACAGCAGCCTGACCCTGCACCACATCCGGGACTGCGAGCG
GGCGGTGTCGACGCTGGCCGGCTACCTCCGACCGGGGTCCGGGCGCCTCG
TGGTGTTCGACCTCGAGGCTACCGAGGATGCGCACAAGTTTCACCCGGCA
GATTTTGAGGTACCGAGACGGGGCGCGGGGAGTGGTGGGCACGGGGGGGG
GGGGGGGGGGAGGTTCCATAGCGTGCCATATGTTTCCGTCTACCCCGTCT
TGTCGGCCTGTCTGTCTACTGCGAGGTGTTTGTAGCCTATGGTGCTTATT
TAGTGTCGCGTGATTGTCGCCGAGAACAAGTTCCCGGCAGGCAGAGATGG
TACTGAGTTACTCCTACTAATTACTGCGCTCGTCCTTTTTTGGCCAACGC
CACCACTACTCTTAAATGCCGATGTTTTGTCCCAGTTGTTTCACGACGGC
ACAATCTTTTCAGAGCAATGCTGGTGCCTTTTATCCTGATTTTTTTTTTT
TATCTTGCGGTTGCATCACCACACGGCTCATTCGATACCCACCATGGTAA
ATTGTAGCTTGTGTCTGTGTTCTCTTGCCTATCTATTTGCTTGTGGGCGT
TTTCTGTCTGCCGGCACTCGGTTGGTTCATAACTTGTGTCTTGTGTTATC
TGCCTATCTGCTTGTGGACGTTTTCTGTCTGCTGGCACCCGGTTGATTCA
TAACTTGTGTCTTGTGTTATCTGCCAATCTGCTTCTGGGCGTTTCCTGTC
TACCAGAACTCGGTTGATTAATAATACGTCCACATTGATGTCGGCCGGCG
TATGTGTACGTGAGAGCGAAAGAAAGGAAGACATGTAAGAACGCGAGGAG
AGGGCCGGGGGACAGAGGACGGCGTATCGCCCGCCCCGTTGTGCTATTGA
GTGTGTGCCCCCTCCCCGCCCTCGAGGCTAGGCTAGGCTAGGCGAGGCGA
GGCTAGATAGACTCTCCAAGTGGAGAATACATTTGGCGTGGCGAGCTATT
CTTATTTTGTCCTCTTTGTTGCGGATAGCGGTGTCGGCCTCGAATTGCCC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCCGCCTGGGAG
ATCTGGTTTCCACGAACGACCAGATGCACACAACGATCAAACCTCCCCCG
CCTCCCCCCAAGCTTTCGGGACGAGCCAGGGTCGGCCCACCGTATGAAAC
GACGAAAGCGAAACGATATAAAAACCTCCGAACGGCGGCGGCGACGACGA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAGTC
CCGTCTGGAAACAGTAGTAGTGACGCCCCTTCAGACTTGGACTCCCCCGT
CTCCCCCTCCCCACCTCTCTTAAAACAGCTCGGCAGGCAGCTGAAACAGC
AGTAGGGACGCTCCTTCTGACGTAAACTGCCCCCCTCTCCACCCCGCCTC
TCCTAAAACAGCTCGGCAACCAGCTTGAGCACCACGGGATCCGAGAGTCT
GACCTGAGGGCGTGGTGCGAGGCCAGCGGGACGCTCGAGGACCTCACCGT
GGACCGCATAACGTTCCACAAGGGGGAGGGAGAGGACGGTATGTATGTAT
GTTGTTGTTTTTTTCCCTCCCATCATTGGCGTATTGGTCGTCTGCCCCAC
TGGCCCCCCTCCTCCACTACGACTAGGCTAGACGACCCAACCGGGGTCAC
ACAGGAGGGGGGGGGGGGGGGGGTGGACCCCCTCCTGCGGTGCCTGCCTG
TTATGTTTTTCATGTATGCATGCATGGAGGAGGGAGAGGACGGTATGTAT
GTATTCATGTATGCACGTGCAGAAAAACAGACATAATGGCCTTAAATATG
GTGATGTGGTAAAATCCTGTTTGCAGGGTTATCGCGCGACGCTCAAAATT
TTGTAAATAGAGACGGCTGCGTGCCTTCCCTGCTTACATGGCGTGGTTCG
TTGGTGTGCGGTGCGACTTGTCCCAGAACCCGTTTGCGCCTGCATGACTC
ACGCAGAGCAGGCATATATCTAGGCCGGGTACAATGGATAGATCACCACG
CGGTGCCGGTGCCTACCAAGGTCTTTTTTTTGTGAGCGTTTGGCGTCGGG
CCCCTCCGCCGACCGCTGGAGTACTTATATATTCACTTATTGTGCGGGGG
ATCCGACATGACCCGTGATTTCCTCGAAACGAGAGTTCCTTCTTTTTTAT
TCTCTGGCATATAGTGAAGTATATGTTCAAGCTGTAAATTTCCATGTGTG
TTAGTTGGTACCTTTACTCTGTTTGCCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGTTGTTGCTGTTTTTGTTGGTGTTGCTTTCGTTGTTCGATGTGGG
AAATGGATCGCGTGTGTATTTAGGAGCCTTCGGGACGGGCCACGAGTTCA
CGCTGCTGGCGGCCACCTGCGTGAGGAAGGCAGAGGGCGCGGTGGAGAAA
GCGGCGAGGAGAAGCAGCGCAGCAGCAGGTCTGTGGCTTTTTATTTATTA
TTTTAATGTCGTGTGGTGCTTTTGTTTTGGTGTGTGCAAGCGTCACATGC
ATACACATATCTGCGTGCGTTACATATACGTATAGTCTATACCAACGAGA
TGACGTGTGCCCGCATTTTCTCCTTCCTCTCGGGTGTTGTTGTGTTTGGC
TTGTCGAGCGATGCATGGAGTCACACGTACACCCATGACACGGCGGTGCT
GTGCCTCCTTGTTGTGAGTCTGGCACCCCTCCGCTTCTTTTCCCTTCGCT
TAGTCCGTGCTGTGCCCTTGTCGCCATGTCGGGACGAAACGTGCGGGCGT
TGTTGGTATACTCCTTTTAAGTGTCATGCGTGTTCTACGCCCGCCCGCGA
GAGAACAACGCATTGCTGGCGGCGCGTTCGGTTGAGGTCCGTATGTATAA
GCCCCGAGATCCGATAGCGGAAGAGAGACAGCGTGGAACAACCCGAGCAG
TTTTTTGTGTACCATCTGTGTTGCCGCCGCCGCTGCTGCTGTTGTTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTAGTGCTCTCT
CTGGATAGCTCTGTTCAGTCGTACATACGTTGTTGTGTTGGTTTTTAGTG
CTCTTCCACCCCAACGGACTCCCACTACTAACTGCTGCCTTGGTGCTGGT
ACATATGTGGTACATATGTATATATGTACGTGCGGTCGTCATTAGCAGGT
CGTTGTTGTGTCTTATGCGGTTATTTGGTTAATCTTGTAACCGTACTCTT
TCCTCACGCTTTAACTGTGACCGCACCACCTAAATAGAAGCAGAGCGGAG
CGAGGGCTGCCTAGCGTGCAAGCAGCAGCACAGGGAGGTGGAGTACGAGT
GCGTCCCGTGCGGGTGCCACGCCTTCTGCAGGGGCTGTGCGATGAAGGTC
GCCACCGGGGGACGGTGAGAACGGGGAGGGGGGTCAGTTGTGGTGGTGGT
GGGGGGTAGTGGTGGTGGTGTGGCGCAGCGACGGCGGCGCGGTAGAGAAG
AGAAGCGCTACACGTTCTGCAAAGCTGCATGCAGTGTCTGCCATGTTTGG
GAAGAAACGCAGGTGGTGCTGTGTGCAGGGGAGAGCTGTGTGTGTTGCGC
TATCGCTTTCAAGTATAAGCTAGCGCCCGTGGTAGTAACAGCGCCGTGTT
TGGCGATGTGTAGGTGGTTGTTGTACTTGTGGTGGTGCTATGCCGCTGTG
GACAAACGATGGAAGATACAACCGTAACGCGACCGCTACTTTGCCCGCGG
AATTAGTGGATGGCGAAATCCCGCCCCTCGGAGGGAGGACACACACGAGT
ATAGGGAGGGAATCGGGGCCCGTTGAAGAGTGAGGAAAGTATGAGATGAA
ATGGGACCAAACAGAATGAGAACAAGATGCATAAAGTTCGAAGCAGATAA
AGATGCACCTATGGTCAGTCCACGGCCAATTGTTCACAATTTCGACCTGC
ACTTAGGTGCACTTTTCTCTGCACACAGGTGGTTGTTCCGAAAACCGAAA
GTACCCGCAAACGCCCTGTCTTCAGGCGCAAGTCCCTGTGGAATCGGTTT
TTGAGTTTTGTTTTTGTTCGTCTTGTATTTCCAAAAACAAACTGTTCGCT
TTTTCCTGGGGTGCGTTTTTCTCACCACACATTTCTGAGACCGGATTTGG
ACAGCTCTTGCAATTTCTCAGGTACACCTTTGTCCGATTTTGATTTGAGT
AAAAACCATAGAAGTTATCGGCGATAAACTCGATTTTAGAGGCCATCTTG
GTCGCTTTTTCCTGCGATAACCAACCATAAGATTTTAACAAAGACCACGG
CAATCGATTCCTCTCGAGAATCTCCAGGTACACTTTCTTCCCGTTTGTTG
ATAAAAAGGATGGTTGTTGAGATGTTCCGTATTTTGTCCATAACCCAGAT
TTTTTCCCTGTCTCCAATGTTTTCGGCCACACAATCACTTGAATTTAGTG
TGGAGGTGTCCCAAAAGTTTTAAAAATAAGTTTTTCTCTCCTTGCTGTCG
GGATCACTTTCATACCCGAAAATCGGTCTATTTGACTCGGGTTTTTTTCG
AAAGTTGTGACAAAAAACATAAAATGAACAAATTGTCCGGGACCATAGAT
CGTAGAGGAACATGAAGGACGCCTAAATAGCTAAATAGTTGTGGTTGATG
CCTCTGTAGAGTTTTTTTCACCGTTTATATTGTACAAACACGGTGCCCCC
CCCCCGTCTCGCAAAGGAATGCGGCGTCAATGTTCAAACGATTCTTCCGG
CAATACACAAACGGGTACCTCCGTCTCTCCCCCCCGTCTCCTCTCCCTCC
CCGTCTCCATTACTTCGGCCCTGTCTTAAACTGATTTGAAACAGCAATAC
CATCTTCTGGTTGACGCCGACGCTTGCTATGTATCTATGTCTGTATGCCG
CCTCTCATCGCCAGGTGCAAGAGGTGCAAAAACATGTTCACGGACTTGAA
GCGGCTGAGGTAATGAGGCGCCTCGCCTCAATCGGCGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1518:4660..11597+

>mRNA_L-elsbetiae_contig1518.3700.1 ID=mRNA_L-elsbetiae_contig1518.3700.1|Name=mRNA_L-elsbetiae_contig1518.3700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig1518:4660..11597+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACTGTAGTACATACAGTACCTCAACAACCTCCTCCCTCCCTGTGGT
CACAGGCAGGATGTGCGAACCACCCCTACTCTTTGACGACAGACAACGTG
CCCCCCCCTGCCTATACCTCCCTCGCCCCTCCCTCCCCGGAAAAACCACA
ACCACAACAACAACAACAACGACGACGACGACGGCGGCGGCACGGCAGCC
GTGGTGGACGCCGCCGGTGGGCGGGCCGACCCTCGACTTCGGCTGCGGCA
CCGGGTGCCTGACGATGGCGCTGAGGGACGACCTCGGAGAGGTGACGGGG
GTGGACACGAGCAGGGCGATGCTGGATCAGTTCGACAGGAAGGCCGGGGA
GAGGGGCGGGGTCACCACGGCCGCCGTCGAGATGTACTGTAGTACATACA
GTACCTCAACAACCTCCTCCCTCCCTGTGGTCACAGGCAGGATGTGCGAA
CCACCCCTACTCTTTGACGACAGACAACGTGCCCCCCCCTGCCTATACCT
CCCTCGCCCCTCCCTCCCCGGAAAAACCACAACCACAACAACAACAACAA
CGACGACGACGACGGCGGCGGCACGGCAGCCGTGGTGGACGCCGCCGGTG
GGCGGGCCGACCCTCGACTTCGGCTGCGGCACCGGGTGCCTGACGATGGC
GCTGAGGGACGACCTCGGAGAGGTGACGGGGGTGGACACGAGCAGGGCGA
TGCTGGATCAGTTCGACAGGAAGGCCGGGGAGAGGGGCGGGGTCACCACG
GCCGCCGTCGAGCTGACGGGCCCCGGGCAGCTCGGAGAAGGCGCCGACGA
CTCGTTCGCCCTGGCGTACAGCAGCCTGACCCTGCACCACATCCGGGACT
GCGAGCGGGCGGTGTCGACGCTGGCCGGCTACCTCCGACCGGGGTCCGGG
CGCCTCGTGGTGTTCGACCTCGAGGCTACCGAGGATGCGCACAAGTTTCA
CCCGGCAGATTTTGAGCTGACGGGCCCCGGGCAGCTCGGAGAAGGCGCCG
ACGACTCGTTCGCCCTGGCGTACAGCAGCCTGACCCTGCACCACATCCGG
GACTGCGAGCGGGCGGTGTCGACGCTGGCCGGCTACCTCCGACCGGGGTC
CGGGCGCCTCGTGGTGTTCGACCTCGAGGCTACCGAGGATGCGCACAAGT
TTCACCCGGCAGATTTTGAGCTCGGCAACCAGCTTGAGCACCACGGGATC
CGAGAGTCTGACCTGAGGGCGTGGTGCGAGGCCAGCGGGACGCTCGAGGA
CCTCACCGTGGACCGCATAACGTTCCACAAGGGGGAGGGAGAGGACGCTC
GGCAACCAGCTTGAGCACCACGGGATCCGAGAGTCTGACCTGAGGGCGTG
GTGCGAGGCCAGCGGGACGCTCGAGGACCTCACCGTGGACCGCATAACGT
TCCACAAGGGGGAGGGAGAGGACGGAGCCTTCGGGACGGGCCACGAGTTC
ACGCTGCTGGCGGCCACCTGCGTGAGGAAGGCAGAGGGCGCGGTGGAGAA
AGCGGCGAGGAGAAGCAGCGCAGCAGCAGGAGCCTTCGGGACGGGCCACG
AGTTCACGCTGCTGGCGGCCACCTGCGTGAGGAAGGCAGAGGGCGCGGTG
GAGAAAGCGGCGAGGAGAAGCAGCGCAGCAGCAGAAGCAGAGCGGAGCGA
GGGCTGCCTAGCGTGCAAGCAGCAGCACAGGGAGGTGGAGTACGAGTGCG
TCCCGTGCGGGTGCCACGCCTTCTGCAGGGGCTGTGCGATGAAGGTCGCC
ACCGGGGGACGAAGCAGAGCGGAGCGAGGGCTGCCTAGCGTGCAAGCAGC
AGCACAGGGAGGTGGAGTACGAGTGCGTCCCGTGCGGGTGCCACGCCTTC
TGCAGGGGCTGTGCGATGAAGGTCGCCACCGGGGGACGGTGCAAGAGGTG
CAAAAACATGTTCACGGACTTGAAGCGGCTGAGGTAAGTGCAAGAGGTGC
AAAAACATGTTCACGGACTTGAAGCGGCTGAGGTAA
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