mRNA_L-elsbetiae_contig15172.3696.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.510e-22 Identity = 65/127 (51.18%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 246 LLGLLRPAAAGAGDCMDSS------VCVDSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKGDPSGRLVNPPG 608 L G + AA+ + D + S V D +LD+ TP ERA A R + A+TEF AS T +NGD SSAA FHK+LPHD LGQV E FD L+ECI Q DFD CE VP GD GRL NP G Sbjct: 37 LSGGVDTAASPSKDTLKGSLSRKLQVVNDDALDVSGTPAERAANALNQRIEFAETEFTASEGTLH-LNNGDRSSAATFHKSLPHDSLGQVNSEDFDLLMECIAQGDFDTCELVPAGD-DGRLSNPLG 161
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 102 bits (255), Expect = 7.240e-22 Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 312 DSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKGDPSGRLVNPPG 608 D + D+ TP ERA A R D A+TEFLAS + + GDFSSAA FHK+LPHDELGQV F+ L+EC+ DFD C+ VP G+ G LVNP G Sbjct: 58 DDAFDVNGTPAERAANALMERTDWAETEFLASEDVFHENL-GDFSSAATFHKSLPHDELGQVFSFDFEELIECVASGDFDTCQEVPAGNVEGFLVNPLG 155
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 102 bits (254), Expect = 9.510e-22 Identity = 59/100 (59.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 303 VCVDSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKGDPSGRLVNP 602 V D +LD+ TP ERA A R +LA+TEF AS E +NGD SSAA FHK+LPHD LGQV AF+ L ECI Q DFDICE VP GD GRL NP Sbjct: 62 VANDDALDVNGTPAERAANALAQRIELAETEFAAS-EGLFHVNNGDRSSAATFHKSLPHDSLGQVDSAAFEALTECIAQGDFDICELVPAGD-VGRLSNP 159
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 83.2 bits (204), Expect = 4.690e-15 Identity = 55/139 (39.57%), Postives = 68/139 (48.92%), Query Frame = 3 Query: 186 EEESSGFQDEANKHLCRPFGLLGLLRPAAAGAGDCMDSSVCVDSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKGDPSGRLVNP 602 E +SG E +KH G G + + D +LD P R A R D A+ E + CQ +NG+ A FHK+LPHDELGQV + F L +CI DF ICE VP GDP+GRLVNP Sbjct: 103 EVTASGVFPEEHKHT---------------GEGRHLQTCTNSDDALDPT-APNRRDNVAFASRRDAARRERDGTGTVCQI-TNGETDLATMFHKSLPHDELGQVTADDFAILEDCILNGDFSICEDVPAGDPAGRLVNP 224
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 75.9 bits (185), Expect = 1.480e-12 Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 339 PLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVP----KGDPSGRLVNP 602 P ER A R A+ E + CQ +NG+ AA+FHK+LPHD+LGQV +AF L +CI D ICE VP +GDP GRLVNP Sbjct: 15 PNERDDEAFASRVAAAKRELEGTGTVCQI-NNGETDLAAKFHKSLPHDDLGQVDADAFAALEDCILNGDLSICEDVPVGNSEGDPVGRLVNP 105
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 65.5 bits (158), Expect = 5.740e-9 Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 291 MDSSVC-VDSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDFSSA----ARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKG-DPSGR-LVNPPG 608 + SVC V ++D + +P +RA+ + R +A E LA TC +NGD ++ +FHK+LPHD++G+V PEA+ L++CI D ++C+ VP G + GR LVNP G Sbjct: 36 LSGSVCRVRDTVDFL-SPTKRAKITFKRRIGIAAGE-LAVGPTCH-LNNGDEANVPLFDGQFHKSLPHDDVGRVNPEAYQLLLDCIESNDINVCDQVPSGVESDGRKLVNPLG 145
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: A0A7S4QJ89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJ89_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 8.800e-6 Identity = 38/115 (33.04%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 285 DCMDSSVCVDSSLDLIDTPLERARRARQLREDLAQTEFLAS---RETCQDGS---NGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDIC-EAVPKGDPSGRLVNPPG 608 D + V +D S++ +P ER + R++ +L ++E + ET D N DF FHKTLP +E G+V+PE ++ ++C+ D +C + +P G SG L+NP G Sbjct: 102 DWDEQCVTLDQSMNPY-SPKERIKYTREMTMELMESEAVDECTLHETNGDEERYKNSDFPYIGNFHKTLPTNEYGEVIPEEYENFLQCVKSGDVVVCNDVLPDG--SG-LLNPIG 212
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: A0A7S4URD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4URD4_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.120e-5 Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 3 Query: 432 NGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDIC-EAVPKGDPSGRLVNP 602 N DF FHKTLP +E G+V+PE ++ L++CI D ++C + +P S RL NP Sbjct: 94 NSDFPYIGNFHKTLPTNEYGEVIPEEYENLLKCIESGDVEVCVDVLPD---SSRLANP 148
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Match: UPI001F38F3E0 (vanadium-dependent haloperoxidase n=1 Tax=Saccharothrix sp. S26 TaxID=2907215 RepID=UPI001F38F3E0) HSP 1 Score: 53.1 bits (126), Expect = 8.440e-5 Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 3 Query: 411 ETCQDGSNGDFSSAARFHKTLPHDELGQVLPEAFDTLVECITQADFDICEAVPKGDPSGRLVNP 602 E +G GD+ A F K LPHDE+G+V PEA++TL+ + + E +P G P +L NP Sbjct: 26 EHVNNGEEGDYPYVANFSKGLPHDEVGEVRPEAYNTLLRALATGRPEDFERIPVG-PGVKLTNP 88 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15172.3696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15172.3696.1 >prot_L-elsbetiae_contig15172.3696.1 ID=prot_L-elsbetiae_contig15172.3696.1|Name=mRNA_L-elsbetiae_contig15172.3696.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp MDSSVCVDSSLDLIDTPLERARRARQLREDLAQTEFLASRETCQDGSNGDback to top mRNA from alignment at L-elsbetiae_contig15172:1473..2754+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15172.3696.1 ID=mRNA_L-elsbetiae_contig15172.3696.1|Name=mRNA_L-elsbetiae_contig15172.3696.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1282bp|location=Sequence derived from alignment at L-elsbetiae_contig15172:1473..2754+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15172:1473..2754+ >mRNA_L-elsbetiae_contig15172.3696.1 ID=mRNA_L-elsbetiae_contig15172.3696.1|Name=mRNA_L-elsbetiae_contig15172.3696.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig15172:1473..2754+ (Laminarionema elsbetiae ELsaHSoW15)back to top |