mRNA_L-elsbetiae_contig1510.3656.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A6H5KAR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR1_9PHAE) HSP 1 Score: 196 bits (497), Expect = 2.440e-61 Identity = 97/130 (74.62%), Postives = 107/130 (82.31%), Query Frame = 1 Query: 52 WLALSLLLVFTAFAFSAEFEDDFNIPKGWKMQDRYHGFRYEAVVDPGCQF--YAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGP-GDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 WL+ +LLL+ A SAE DDFNIPKGW+MQDRYHGFRYEA VD GC F YAEAAQ AAD+LACFGWVQRTS ST+AGE+RCSKATG KMQ LRQGP G+ C V GFE KDY+DTKIKLHFSHFK+L Sbjct: 3 WLSNALLLLALAPVVSAELVDDFNIPKGWRMQDRYHGFRYEATVDQGCLFDAYAEAAQAAADELACFGWVQRTSPSTMAGESRCSKATGEKMQGRLRQGPPGNGCDVVGFETKDYADTKIKLHFSHFKIL 132
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: D7G306_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G306_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.340e-41 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 1 Query: 49 SWLALSLLLVFTAFAFSAEFEDDFNIPKGWKMQDRYHGFRYEAVVDPGCQF--YAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKM 321 SWLA +LLL+ SAE DDFNIPKGW+MQDRYHGFRYEA VD GC+F YAEAAQ AAD+LACFGWVQRTS +T+AGE+RCSKATG KM Sbjct: 2 SWLANALLLLALVPVVSAELADDFNIPKGWRMQDRYHGFRYEATVDQGCRFDAYAEAAQAAADELACFGWVQRTSPNTMAGESRCSKATGEKM 94
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S2WHN9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHN9_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.860e-26 Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 118 FNIPKGWKMQDRYHGFRYEA---VVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 F+ P GW+M DR+ GFRYEA VV G Y+EAA A+ L CFGW Q T+ ++ GEARC+K+ P M+ L QG + +V KDY +TKIKLHFSHFK+L Sbjct: 19 FDGPPGWRMVDRFAGFRYEAQGSVVSVG---YSEAAAVKAEALGCFGWAQSTARGSVVGEARCAKSVAPVMKEWLEQGNPES-RVDSVTFKDYENTKIKLHFSHFKIL 122
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S2FNY1_9STRA (Acylphosphatase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNY1_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.920e-24 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 118 FNIPKGWKMQDRYHGFRYEAVVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 F+ P GW+M DR+ GFRYE + + + +A A +L CFGW Q T T+ GE RC+K+ P M+ L GP +V KDY +TKIKLHFSHFK+L Sbjct: 41 FDGPPGWRMVDRFAGFRYEVMGNVIGVGFRQATSEKATQLGCFGWAQNTERGTVVGEVRCAKSVAPAMKEWLAAGP-PKSRVDEVTVKDYENTKIKLHFSHFKIL 144
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S3ZVT6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVT6_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.080e-24 Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 133 GWKMQDRYHGFRYEA----VVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 GW+M DR+ GFRYE VV G + AA++ AD+L CFGW+Q + T+ GEARC+K + +A LR+G +V + DY DTKIKLHFSHFK L Sbjct: 25 GWRMVDRFAGFRYEVKGPHVVQSG---FHTAAEKLADELGCFGWIQDSEFRTVVGEARCAKTVADRFKAFLREGH-PTSEVEAVDIYDYPDTKIKLHFSHFKRL 124
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S3JVZ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVZ0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 7.320e-24 Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 133 GWKMQDRYHGFRYEA---VVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 GW+M DR+ GFR+E V D G + EA + AD+LACFGW+Q + T+ GEARC+KA G ++ LR GP D V DY DTKIKLHFS+FK+L Sbjct: 29 GWRMIDRFMGFRFEIQGQVQDIG---FEEAVRDKADELACFGWIQESELGTMVGEARCAKAVGNILKDFLRMGP-DGADVEDANILDYPDTKIKLHFSYFKIL 127
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A6U1NP13_9STRA (Acylphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NP13_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.610e-23 Identity = 57/152 (37.50%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 73 LVFTAFAFSAEFEDDFNIPKGWKMQDRYHGFRYEA---VVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCK-----------------------------VHGFEAKDYSDTKIKLHFSHFKML 432 L F +F ++ P+GW+M DR++GFR+E V D G + ++ Q AA+ L CFGWVQ T T+ GE RCSK GP + LR GP + V E K+Y DTKIKLHFSHFK+L Sbjct: 9 LFFLTCIIFGKFRTSYSQPEGWRMVDRFYGFRFEVSGTVQDVG---FRKSTQDAAEVLGCFGWVQNTDHGTVVGEGRCSKWNGPLLVGWLRAGPTAAAEAAAASEDENIAGSLVALANQLPRQAVGSLVTSVEVKEYEDTKIKLHFSHFKIL 157
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S4VH54_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VH54_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.050e-21 Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 130 KGWKMQDRYHGFRYEA---VVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 +GWKM DR+ GFRYE V D G + E + ADKLACFGW + + +T+ GE RC+K G M+ ++ V + K+Y DTKIKLHFSHFK++ Sbjct: 9 EGWKMTDRFIGFRYEVYGNVKDIGIR---EKIKEKADKLACFGWARYSPQNTVVGEVRCNKNAGKVMKGWIKSMTSKV------DLKEYDDTKIKLHFSHFKII 103
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A5A8DMJ2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DMJ2_CAFRO) HSP 1 Score: 86.3 bits (212), Expect = 1.330e-18 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 121 NIPKGWKMQDRYHGFRYEAVVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGPGDVCKVHGFEAKDYSDTKIKLHFSHFKML 432 ++P GW+M+DR+ GFR+E +A + AD+L+ FGWVQ + T+ GE R +K T P M+ L GP D ++Y DTKI+ HFSHFK++ Sbjct: 26 DVPAGWRMRDRFGGFRFECRGAFDRDAWALQVRDYADELSGFGWVQLSPVGTVVGEFRGTKQTAPWMREFLEAGP-DESAAFACAVEEYPDTKIRFHFSHFKVM 128
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Match: A0A7S2BRA9_9STRA (Acylphosphatase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRA9_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.100e-14 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 118 FNIPKGWKMQDRYHGFRYEAVVDPGCQFYAEAAQRAADKLACFGWVQRTSTSTIAGEARCSKATGPKMQAHLRQGP 345 F+ P GW+M DR+ GFRYE + + + +A A +L CFGW Q T T+ GE RC+K+ P M+ L GP Sbjct: 41 FDGPPGWRMVDRFAGFRYEVMGNVIGVGFRQATSEKATQLGCFGWAQNTERGTVVGEVRCAKSVAPAMKEWLAAGP 116 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1510.3656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1510.3656.1 >prot_L-elsbetiae_contig1510.3656.1 ID=prot_L-elsbetiae_contig1510.3656.1|Name=mRNA_L-elsbetiae_contig1510.3656.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp RQCRANRLPRSLTMVTSWLALSLLLVFTAFAFSAEFEDDFNIPKGWKMQDback to top mRNA from alignment at L-elsbetiae_contig1510:4100..10213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1510.3656.1 ID=mRNA_L-elsbetiae_contig1510.3656.1|Name=mRNA_L-elsbetiae_contig1510.3656.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6114bp|location=Sequence derived from alignment at L-elsbetiae_contig1510:4100..10213- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1510:4100..10213- >mRNA_L-elsbetiae_contig1510.3656.1 ID=mRNA_L-elsbetiae_contig1510.3656.1|Name=mRNA_L-elsbetiae_contig1510.3656.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig1510:4100..10213- (Laminarionema elsbetiae ELsaHSoW15)back to top |