mRNA_L-elsbetiae_contig1500.3602.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1500.3602.1
Unique NamemRNA_L-elsbetiae_contig1500.3602.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 5.710e-21
Identity = 68/137 (49.64%), Postives = 86/137 (62.77%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHVQDTSSAH-AGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET+ N QG  A +++G     EEED+L  +DV+RVRELL NAPA RAWRRRGYL++CRA PD +   + TS  H   V R TR  A++ R        TV+ S       G+ A VV+ V+ L+EEGIFRTIV YL
Sbjct:  272 DETIANVQGNKAVDMIGEDV--EEEDRLT-EDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDEST-----GGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 6.170e-9
Identity = 58/142 (40.85%), Postives = 78/142 (54.93%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIM------QHVQDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET  +  G    N+VG M    E D +  + V RV +LL  AP  RAWRRRG LVLCRAHP+ +       HVQ+++     V R TR   ++       +  + E +  DG+   + + +V  VLGL +EGIFRTIVGYL
Sbjct:  268 DETDDDAYGHTPGNIVGCMT--PETDSMFVN-VQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQEST-----VLRVTRSRTKLVERE-QVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.860e-8
Identity = 52/136 (38.24%), Postives = 63/136 (46.32%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHVQDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET+ + QGE AA+ +G       +     +D +R R LL  APA RAWRRRG LVLCRAHPD +Q           +G                               GD A +VA V GL E G+FRTIV YL
Sbjct:  302 DETIVSKQGETAADSIGTRRCHRTDP----EDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ-----------LG-------------------------------GDLAGLVAGVGGLEEVGVFRTIVLYL 391
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.340e-7
Identity = 51/136 (37.50%), Postives = 61/136 (44.85%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHVQDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET+   QG+ AA+ +G   F   E      D +R R LL  APA RAWRRRG LVLC A+PD +Q           +G                               GD A +V  VLGL E G+FRTIV YL
Sbjct:  298 DETIVCKQGKTAADRIGTRRFPSTEP----GDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ-----------LG-------------------------------GDLAGLVDRVLGLEEVGVFRTIVLYL 387
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.400e-7
Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAH--PDIMQHVQDTSSAHA-GVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLG-------LREEG---IFRTIVGYL 409
            DET  +  G  AA++V L    EE D LA +DVDRVR+LL  APA RAWRRRG+L+L RAH     +Q    TS A A GV + TR            SSE    + +D       A VV+M++G       L  +G   IF  IVGYL
Sbjct:  651 DETAVSENGHTAADMVVLKT--EESDSLA-EDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTR------------SSEEPSRAEIDW------AGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 7.010e-7
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 2 
Query:    5 ETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHV-----------------QDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASP---VDGQDDGDS-AFVVAMVLGLREEGIFRTIVGYL 409
            ET  + QG   +  +  +A   +ED      ++R+ +LL  AP  RAWRRRG+L LCRAHPD ++ V                 Q+  S  A  G+ ++    V     S S E    +    VDG+ DG    F    ++ L EE +FR IVG+L
Sbjct:  306 ETAVDLQGSTPSEFIPAIAEAADEDHRR---LERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.110e-6
Identity = 56/142 (39.44%), Postives = 70/142 (49.30%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRA---HPDIMQHVQDTSSAHAGVGRTTRGGARVGRT---AASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET  +  G+  A+ VG     E  D L   +V  V ELL NAPA RAWRRRG LVLCRA      + Q  +D      G+ R TR  A++ R+    A C   T E    D             V+ L EEGIFR++VG+L
Sbjct:  290 DETTPDRNGQQPADRVGHCM--ELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQ--EDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKR-----VVELEEEGIFRSVVGFL 422
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: A0A6H5KNN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN1_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.960e-6
Identity = 48/111 (43.24%), Postives = 60/111 (54.05%), Query Frame = 2 
Query:   95 DVDRVRELLNNAPAHRAWRRRGYLVLCRA---HPDIMQHVQDTSSAHAGVGRTTRGGARVGRT---AASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            +V  V ELL NAPA RAWRRRG LVLCRA      + Q  +D      G+ R TR  A++ R+    A C S T E    D +    S  VV +     EEGIFR++VG+L
Sbjct:   50 EVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQ--EDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGTGD-EWRSASRRVVEL-----EEGIFRSVVGFL 152
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7G2K5_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K5_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.640e-6
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 2 
Query:   92 DDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIM-QHV-QDTSSAHAGV 235
            D++ RVR+LL+NAPA RAWRRRG+LVLCRA PD M Q+V  +T +AHA V
Sbjct:  249 DNLKRVRDLLHNAPADRAWRRRGFLVLCRAFPDRMHQNVGNNTPTAHAAV 298
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BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.990e-6
Identity = 51/136 (37.50%), Postives = 64/136 (47.06%), Query Frame = 2 
Query:    2 DETVFNFQGEAAANVVGLMAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHVQDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVAMVLGLREEGIFRTIVGYL 409
            DET     G  AA+ +G+     EED++  ++ + VR+LL NAPA RAWRRR  LVLCRA PD MQ   D                R+ R                         + A VLGL EEGIFRTIV ++
Sbjct:  291 DETHVAGNGMRAADAIGMKV--PEEDRIP-EEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD----------------RIAR-------------------------LEARVLGLVEEGIFRTIVRFI 382
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1500.3602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE5.710e-2149.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI6.170e-940.85Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G1U1_ECTSI1.860e-838.24Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G137_ECTSI1.340e-737.50Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE3.400e-742.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB54_9PHAE7.010e-732.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD0_ECTSI1.110e-639.44Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNN1_9PHAE1.960e-643.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K5_ECTSI2.640e-666.00EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7FKL4_ECTSI3.990e-637.50Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1500contigL-elsbetiae_contig1500:5353..9123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score66.6
Seed ortholog evalue8.8e-09
Seed eggNOG ortholog2880.D7G981
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons3
Model size1688
Cds size357
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1500.3602.1prot_L-elsbetiae_contig1500.3602.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1500 5408..5764 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.4661064-UTR-L-elsbetiae_contig1500:5352..54071622815608.4661064-UTR-L-elsbetiae_contig1500:5352..5407Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 5353..5407 +
1691682988.6696784-UTR-L-elsbetiae_contig1500:5352..54071691682988.6696784-UTR-L-elsbetiae_contig1500:5352..5407Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 5353..5407 +
1622815608.4900181-UTR-L-elsbetiae_contig1500:5764..57691622815608.4900181-UTR-L-elsbetiae_contig1500:5764..5769Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 5765..5769 +
1691682988.6926692-UTR-L-elsbetiae_contig1500:5764..57691691682988.6926692-UTR-L-elsbetiae_contig1500:5764..5769Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 5765..5769 +
1622815608.5064306-UTR-L-elsbetiae_contig1500:7125..73201622815608.5064306-UTR-L-elsbetiae_contig1500:7125..7320Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 7126..7320 +
1691682988.7093377-UTR-L-elsbetiae_contig1500:7125..73201691682988.7093377-UTR-L-elsbetiae_contig1500:7125..7320Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 7126..7320 +
1622815608.5197039-UTR-L-elsbetiae_contig1500:8047..91231622815608.5197039-UTR-L-elsbetiae_contig1500:8047..9123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 8048..9123 +
1691682988.718415-UTR-L-elsbetiae_contig1500:8047..91231691682988.718415-UTR-L-elsbetiae_contig1500:8047..9123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1500 8048..9123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.4797666-CDS-L-elsbetiae_contig1500:5407..57641622815608.4797666-CDS-L-elsbetiae_contig1500:5407..5764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1500 5408..5764 +
1691682988.6829472-CDS-L-elsbetiae_contig1500:5407..57641691682988.6829472-CDS-L-elsbetiae_contig1500:5407..5764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1500 5408..5764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1500.3602.1

>prot_L-elsbetiae_contig1500.3602.1 ID=prot_L-elsbetiae_contig1500.3602.1|Name=mRNA_L-elsbetiae_contig1500.3602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MAFQEEEDQLAQDDVDRVRELLNNAPAHRAWRRRGYLVLCRAHPDIMQHV
QDTSSAHAGVGRTTRGGARVGRTAASCSSETVEASPVDGQDDGDSAFVVA
MVLGLREEGIFRTIVGYL*
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mRNA from alignment at L-elsbetiae_contig1500:5353..9123+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1500.3602.1 ID=mRNA_L-elsbetiae_contig1500.3602.1|Name=mRNA_L-elsbetiae_contig1500.3602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3771bp|location=Sequence derived from alignment at L-elsbetiae_contig1500:5353..9123+ (Laminarionema elsbetiae ELsaHSoW15)
GGACGAGACCGTCTTCAACTTCCAAGGCGAGGCAGCCGCAAATGTGGTCG
GCTTGATGGCCTTTCAAGAAGAAGAAGATCAACTGGCCCAGGATGATGTC
GACCGCGTGCGCGAGCTGTTGAACAACGCTCCGGCCCACAGAGCATGGCG
TCGCCGGGGCTACCTGGTGTTGTGCCGCGCTCACCCTGACATAATGCAGC
ATGTACAGGACACCAGCAGCGCGCATGCCGGGGTGGGACGGACAACTCGC
GGCGGAGCTAGGGTGGGAAGGACAGCAGCGAGTTGCAGCAGTGAGACCGT
TGAAGCTAGCCCGGTGGATGGACAGGATGATGGCGACTCGGCCTTTGTGG
TGGCGATGGTGCTGGGATTGCGAGAGGAGGGCATATTCCGGACGATCGTT
GGGTATCTGTGAAGCCGGTGAGTAGAAGTTTTGCCATCCCATCCGATCAC
GTATATCTATGTGTTTTTCACATTATTTCCAGTGCTCGATGGGCTCCCTT
TCACGAGGTCATCTTGCCAGAGTACTGAGCCGTGGTCACACAGAAGGGTT
CCTTTCCCCAAGGCCCCCGCTCCCCCCGTCTGCGGTGCTTGCCTAATATT
TTTGTGGCGAGAAGGGTTCAGCCGCCCCTTTCCCTCGTCGACGGTGAGGT
CGAAGTTTGTGTACACACGCTAAGCGCTATCCACTGACAGGGACGGAAGC
GAGAGAAAAAACTTACTTTTCAAGAAAAAGTCGCTCCCGCCGAGATTCGA
ACGCACGACCTGTCTGCTAGAAGGTGTTCGGGGGTACCAACTATTTAGAC
CACCGGGTATCGGCAAAATAAGAACTTGTTGCATACTCTTACACAGAGGC
AATACCACGCGCTCACCAACTTACACCCCCTTACCCAAGCCCAAGCAAGA
TCCAAATTCAAAGCATATGACCAGATATTCAACTCTTCACCTGGTTTGGC
TTTGGTCATTCTCTTTCGAATGTTGGGGCTACTCTTTGGGGGCTCAGTTT
GCTGTTTATGATACACGCCTGTGAGAAGCAAACATGAACCTACTGCCACG
TAGAGGGTTTCCAGACGCGCCACTGCTGTAGCGACATAGCCGTAGAGTCT
GCTCTGTGTTGTACTTGTTTGTTTTCGGAGTTATCCCAAACCTTACGCCA
TCGCTACTCCACGTCCACTGCTTAGTTCGACCCTCGTCTAAGGCGCGCTG
CTGATTTGTCTCATCCTTGGCCCCTCCGCGCAGTAGCAAATCGTGCTGTA
GCGTTTATCATAAACACACGGATATATCTATGAATACTCTTTGTTGTAAG
CGGTAGATGTAATCGGTAGATGCAATCGGTTGATGTATCGCGGGCAGCAA
TCTGAACCGATTGCAATTTAGTAGCATCTGTTCCAGCCAAGCAGTCCCGC
ACAATACTGCGAATGTGCGGGGTTGGTGGGGGTGTTACGTGGAGTGTTTA
CTAAGCCCGCGAAGTCGGCAGACAAGTAATGTTCTCTGCACCGAGCTGGC
CCTACCTAGCCAGGAGGCACATTATGGCAGAGAGTTTACAGTCAGTGTAC
GCCCAGCAACGCGAAGGCTTTTTAGGGAGCAGATAAAACAAGCCTTCTAG
CGGTAATGCTGGGCTTGATGTTACCATGCGCCCTGCTTACTTAGCAGTAC
TGCCACATCAGCGTCAATCTCCACATCAGGGGAGAACCCCTTCTCCCCCC
TGCGCTTCCTTTTCGATCAATAAGGATCATCACACACGTGCTTCTTTTGC
CATAACATGAAGCTTTCTCTCAGGAAATGATGCACTATGCTGCACCACCT
GATACCCTGATTGGGCCGGTACACAGACACCGCGGCGAAGACTCGCACGT
CATGGATTTCAAACCTGGGAAACCCTCCTGTGTTACTCGTTGTTGAAGTG
GCATTGCGGAAAAGACCGGTGTGGGTATCCCCCCTCCTGTGGGATCCCGG
CTGGCACGTCAAATGCAGGTTGGTGCACAGAAAACATGCGCACACTAAAA
TATGTGTGTGCGCCTACACCGAAACGTCCATGTACCTGCACCGAAGAGAT
GATGGCAGACGCCAGAATAAATTGGGACTCTCTTGCTACTTGTTTTTAGT
GAGAAACGGCAAGTGTATTGTGTGTTCGCCTCGTTTTTTTAGAGGGGACG
ACAGATAGAGACCGCTGACGTCACTTTTCCGTGGAGGCATACTTCAATTC
AACCCCCCCCCCCCCTCCTTACTCTGAAATGGGGTTCGAGCTTCACTGTT
GTGCTTTCTATGATTCCTTTTATTTTTTATTTTCGTTTGGATACCGTCCT
TTCTAATTGAAAGGAAGTAAGAATATTTTTGAGGCCGCTCGATGGCGATG
GTCTGATTTTCTGTGTTTTCTGCAAACAGTCGATTGGAGATCGCTGTCGT
TGTTGTGTTTTTGTTCTACGGGTTACGGACGAGATTTTGACAAAAACTCG
TGTTGTTGCTCCTTGTTCGTTAAAGCACTAAAGTTGTTTTTTATTGGCCG
CGCTCTGCTAAGCGTGACTCTCTCTCGACTCTTACTTGAAGTTTGCTATA
TGACTGCTCTCGATTTGCAGGTATTCCGAGGTACTTTTAGGCCACGCTGT
TTTGCACCCAATTTTCTCTTTGAAATGCATTTGTCTTGTTGCTTCAACGT
CGAACTTGGGATTCCTCGTCCATCCCCACTCGGCCGCTCCCTTAGGATAA
ATATGTTCCGGACTGCTTCAGCCTCCAGCGGATGGGGAAACCGTTTGAGG
ACCGGTTGAGGGGATTGATGGGCGGCCGCTCGTGTTTTATTTGTCACAAA
TCGTCGTGGAAACCTGCAATACTTTGGACACCTCCTTTTTTTCGGACGAC
AGCGTATTCTGGCTAAGCAACAGACAAGTGTTCTGGGTTGTTCTGTCTCT
CCTGGTATCCCGCTGCTCACAGCACGAATATGTCACTGTACTTTCTTTTA
CATGTACTAGGATCGTGGTTTTTCCCGAGAGGGTGTGGTGTCCTGTTTTG
CCTCTTGCTCAGACGGATGGAGCCTCTCTGACCCTTCAGCGAAGGGGTAC
TCGTTTGCTAGTGCCGTAGAATGTGACATCTTGGTGTTGGATCCAAGATT
AGGTCCTCTCGTCCTTTTCGTATGTTGAGTGGATTCGTGCGAACGCTGAT
TGCCCCCGTGGTTGAAGGTAGCGGTGAAGGGGTAGAAGATTGCCGGTTTC
GTGAGGTTGAGTCTCAGCGCAGACGTGTGGCCAGGTTGTTCTTTTGGTGC
GTGTCGCCCGGCCGATCCCACGCATCTGCTTACCAGAACGACTCAAGGAA
GGAGACACTAAATATGTACAGCTGTGGAGTAGCACAATGCCTTACCGCCC
AAAGCGACACTGTTTGCTGCGGTAGTCGCGAAGGCCGATGTGGTGTAATT
CTTGCCCTTGTTCTCCTTTTGGGAAAAAGCAAACAGTGATTTCCCCACGC
AGCATGGGGCGAGAAGAGGGGGGCGTGTAGGATGCTCTCCTCCCGATACC
TTGCCCTCGGCGGTAAAAGAGCACACAAAAACACCATTTCGACGGCACTG
AGAAGGCATGAAATGTGTAGCGACCGGTCGTCGGAGCAGTTATATTTCGA
TTTTGAATGCAACTCGGAAGTCACCTTGCACGATATCATTGTGGTACAAT
AGCCTGATCCGCATCATCGGGGTGACAAGTTCCGCAGGTCGGCACTATTC
TTGCACGAACAGTGCTCCCCGCCGCGGGAGTCGATTCGTCACCACGTTTA
CCTACGGTATTCTCACACGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1500:5353..9123+

>mRNA_L-elsbetiae_contig1500.3602.1 ID=mRNA_L-elsbetiae_contig1500.3602.1|Name=mRNA_L-elsbetiae_contig1500.3602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig1500:5353..9123+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTTTCAAGAAGAAGAAGATCAACTGGCCCAGGATGATGTCGACCG
CGTGCGCGAGCTGTTGAACAACGCTCCGGCCCACAGAGCATGGCGTCGCC
GGGGCTACCTGGTGTTGTGCCGCGCTCACCCTGACATAATGCAGCATGTA
CAGGACACCAGCAGCGCGCATGCCGGGGTGGGACGGACAACTCGCGGCGG
AGCTAGGGTGGGAAGGACAGCAGCGAGTTGCAGCAGTGAGACCGTTGAAG
CTAGCCCGGTGGATGGACAGGATGATGGCGACTCGGCCTTTGTGGTGGCG
ATGGTGCTGGGATTGCGAGAGGAGGGCATATTCCGGACGATCGTTGGGTA
TCTGTGAATGGCCTTTCAAGAAGAAGAAGATCAACTGGCCCAGGATGATG
TCGACCGCGTGCGCGAGCTGTTGAACAACGCTCCGGCCCACAGAGCATGG
CGTCGCCGGGGCTACCTGGTGTTGTGCCGCGCTCACCCTGACATAATGCA
GCATGTACAGGACACCAGCAGCGCGCATGCCGGGGTGGGACGGACAACTC
GCGGCGGAGCTAGGGTGGGAAGGACAGCAGCGAGTTGCAGCAGTGAGACC
GTTGAAGCTAGCCCGGTGGATGGACAGGATGATGGCGACTCGGCCTTTGT
GGTGGCGATGGTGCTGGGATTGCGAGAGGAGGGCATATTCCGGACGATCG
TTGGGTATCTGTGA
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