mRNA_L-elsbetiae_contig14891.3527.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: D7FJ29_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ29_ECTSI) HSP 1 Score: 256 bits (653), Expect = 1.310e-80 Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 3 Query: 3 LKHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEEA 578 L+HRPVMNLHEERGFT STTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVG+V+TGFSAEV+IESW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK+ELWAGNPAKFVRKLSEEDVAE+EAEAERRSALGELHADEFNPYGQ YVQAEEA Sbjct: 16 LRHRPVMNLHEERGFTMSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGHVDTGFSAEVAIESWVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNELWAGNPAKFVRKLSEEDVAEIEAEAERRSALGELHADEFNPYGQGYVQAEEA 207
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A7S3GN43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN43_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.620e-28 Identity = 87/191 (45.55%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEEA 578 +HR VMNL+++R + FVAP ASVVG+V + D +WYGAV+RGDKNK+K+G +V D+AVI+TV N+ TGF A V I XXXXXXXXXXXXXXXXXXXX ++LWAGNPA +VR +++E+ ++ AE + +G H +EF P+G Y AE A Sbjct: 38 RHRAVMNLYDKRPIIAAGGFVAPNASVVGDVLLFDEVSIWYGAVLRGDKNKIKVGRLTNVQDRAVISTVANLNTGFPANVEIGDSVTIGHGALITSATIGNRVLVGQGSIIQEGAEXXXXXXXXXXXXXXXXXXXXSNQLWAGNPAVYVRDVTDEESVGIKKSAEHYAEVGRTHGEEFLPFGTTYQAAEAA 228
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A7S3AQF6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AQF6_9EUKA) HSP 1 Score: 116 bits (290), Expect = 1.980e-26 Identity = 96/190 (50.53%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HR +MNL ++R F+AP A++VGNV + D S VWYGAVIRGD++ V IG + ++GD+ VI + TGFSA I + XXXXXXXXXXXXXXXXXXXXXXXXXXX E+W G+PA F+RKLS+E+V E E AE SALG HADEF Y Y AEE Sbjct: 50 RHRALMNLFDQRPKIGGRVFIAPNATIVGNVDVKDESSVWYGAVIRGDQSNVYIGGYTNIGDRTVIQSAAINPTGFSARTYIGDFVTVGQGCILRACTVDDKSVIGDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVWGGSPAAFIRKLSKEEVTEHEQGAEATSALGAKHADEFLHYSTTYQLAEE 239
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: W7TW63_9STRA (Trimeric LpxA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW63_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.080e-25 Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HR V NL ++R S FV+P A+VVG V + D +WYGAVIRGD+N VKIG +V D AVI TV ++++GF A V I + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELW GNP KF+RKL +E+V A AE AL + H +EF P+G AY+ AE+ Sbjct: 69 RHRQVSNLFDQRPRVASNAFVSPSATVVGEVSLWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVICTVPSLDSGFPATVDIGNLVTIGHSATITSATIEDKALVGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGELWGGNPVKFIRKLEDEEVLANVAAAEAYHALAQSHENEFLPFGAAYLDAEK 258
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A5A8CT95_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CT95_CAFRO) HSP 1 Score: 112 bits (279), Expect = 4.900e-25 Identity = 82/190 (43.16%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HRPVMNL ++ T + FVAP A+VVGNV I S VWYGAV+RGD+ +V+IG + ++ D+AV+ T VE S I S XXXXXXXXXXXXXXX +LWAGNPA+FVR L++E++A +E +AE S+L E HA EF P ++ AE+ Sbjct: 39 RHRPVMNLFDKHPVTDPSVFVAPNATVVGNVTIAHKSNVWYGAVVRGDQARVEIGGYTNIQDRAVVTTAKEVEGQSSGVTKIGSHVTVCPGAVLRSCVVEGHNRIGAGAVVNDGXXXXXXXXXXXXXXXHPGRRIPGGQLWAGNPAEFVRNLTKEEMAALEIDAEAASSLAEEHAAEFLPTSAVHLDAEK 228
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: K3WLJ5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLJ5_GLOUD) HSP 1 Score: 110 bits (276), Expect = 1.500e-24 Identity = 82/190 (43.16%), Postives = 115/190 (60.53%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HR VMNL+E+R +VAP A++VG+V I + + VWY VIRGD N+V+IG ++ D+ VI+T G S SI + XXXXXXXXXXXXXXXXXXXXXX +LWAGNPAK+VR +S+++V+++ +A+ ++ + H+DEF PYG AY+ AE+ Sbjct: 39 RHRQVMNLYEKRPVIAHDVWVAPNATIVGDVEICNDASVWYNVVIRGDLNQVRIGNRTNIQDRTVIHTASTTNAGLSPGASIGNDVTVGHGCILYSCTIENNSLIGMGSIILDGXXXXXXXXXXXXXXXXXXXXXXSGQLWAGNPAKYVRDISDDEVSDIVKQAKEYKSIADTHSDEFLPYGTAYLDAEK 228
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A7S1CBV1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBV1_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.560e-24 Identity = 79/186 (42.47%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYV 563 +HRPV NL+E+ + FVAP A+V+G+V+I+ S VWYGAV+RGD N V+IG + +GD+AV++T +VE +A I + XXXXXXXXXXXXXX +LWAGNPA+FVR L++E++A E +AE + LG HA EF P G AY Sbjct: 58 RHRPVQNLYEKHPEVENNVFVAPSATVIGHVQILHKSSVWYGAVVRGDVNAVEIGGYSSIGDRAVVSTTKSVEGRPAATCRIGDYVTVGPGALLQSCTIENGVKIGAGAVVMEGALVXXXXXXXXXXXXXXGRRIPSGQLWAGNPAQFVRNLTKEELATFEGDAEFVADLGGEHAHEFLPAGGAYT 243
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A8J5XCB5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCB5_DIALT) HSP 1 Score: 110 bits (275), Expect = 1.680e-24 Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAY 560 +HR VMNL+E+R + FVAP ASV+G+V + D VWYGAV+R D N V IG + ++ ++AV++ + TGF A SI SW XXXXXXXXXXXXXXXXXXX E+W GNP FVRKLS+E+ A++E +A + + H ++F PYG Y Sbjct: 39 RHRAVMNLYEKRPSMAADVFVAPSASVIGDVILNDGVSVWYGAVVRSDVNPVTIGGYTNIQERAVVHAATSTPTGFKANCSIGSWVSVGQGAVLRACTVEDYCVIGAGSVLLEGXXXXXXXXXXXXXXXXXXXRVPSGEMWGGNPIAFVRKLSKEEAADIEKQANAVADAAKEHQEQFLPYGTTY 223
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: A0A7S0JJW9_9EUKA (Hypothetical protein n=2 Tax=Coccolithales TaxID=418917 RepID=A0A7S0JJW9_9EUKA) HSP 1 Score: 108 bits (270), Expect = 1.570e-23 Identity = 87/190 (45.79%), Postives = 111/190 (58.42%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HR VMN+ ++R + FVAP ASV+GNV + S +WYGAV+RGD++ + IG +GD+ V+ + TGFSA I W XXXXXXXXXXXXXXXXXXXXXXX E++AGNPA FVRKLS+E++AE E A+ +L HADEF Y AY E+ Sbjct: 59 RHRAVMNVFDQRPLLAPSAFVAPNASVIGNVEVKCQSSIWYGAVVRGDQSNIFIGGCSSIGDRTVVQSSTVNPTGFSARTYIGDWVTIGQGCVLRACTVDNFSKVGDGCIIQEXXXXXXXXXXXXXXXXXXXXXXXXXEVYAGNPAVFVRKLSKEEIAEFEVSADAVVSLAAKHADEFLDYSDAYQLREQ 248
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Match: R1DUX3_EMIHU (Gamma carbonic anhydrase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DUX3_EMIHU) HSP 1 Score: 107 bits (268), Expect = 1.960e-23 Identity = 88/190 (46.32%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 6 KHRPVMNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGAHVHVGDKAVINTVGNVETGFSAEVSIESWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELWAGNPAKFVRKLSEEDVAEVEAEAERRSALGELHADEFNPYGQAYVQAEE 575 +HR +MNL ++R + FVAP AS++GNV ++D S +WYGAV+RGD++ V IG +GD++V+ + TGF+A+ SI W XXXXXXXXXXXXXXXXXXXXXXXXXXX E+ GNPA FVRKL ++++A +E +AE S + HADEF Y Y E+ Sbjct: 38 RHRALMNLFDQRPKLRPSVFVAPNASLIGNVSVMDESSIWYGAVVRGDQSPVDIGGKSSIGDRSVVLSASVNPTGFAAKTSIGDWVTVGQGCVLRGCTVDNFAVVGDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVHGGNPAAFVRKLEKDEIAAIEKKAEDVSMSAKKHADEFLAYSNTYQLREQ 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14891.3527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14891.3527.1 >prot_L-elsbetiae_contig14891.3527.1 ID=prot_L-elsbetiae_contig14891.3527.1|Name=mRNA_L-elsbetiae_contig14891.3527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp MNLHEERGFTTSTTFVAPCASVVGNVRIIDHSCVWYGAVIRGDKNKVKIGback to top mRNA from alignment at L-elsbetiae_contig14891:1102..3342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14891.3527.1 ID=mRNA_L-elsbetiae_contig14891.3527.1|Name=mRNA_L-elsbetiae_contig14891.3527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2241bp|location=Sequence derived from alignment at L-elsbetiae_contig14891:1102..3342+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14891:1102..3342+ >mRNA_L-elsbetiae_contig14891.3527.1 ID=mRNA_L-elsbetiae_contig14891.3527.1|Name=mRNA_L-elsbetiae_contig14891.3527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1122bp|location=Sequence derived from alignment at L-elsbetiae_contig14891:1102..3342+ (Laminarionema elsbetiae ELsaHSoW15)back to top |