mRNA_L-elsbetiae_contig14608.3364.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14608.3364.1
Unique NamemRNA_L-elsbetiae_contig14608.3364.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: D8LR65_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR65_ECTSI)

HSP 1 Score: 633 bits (1633), Expect = 4.390e-220
Identity = 358/613 (58.40%), Postives = 420/613 (68.52%), Query Frame = 1
Query:    1 MAFALLDSDFVITAVNDEYVAQVMSRKGSVGSKFVEVFEEPDQET-------------ISGALARAADGGMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHLRSLSGLCASVVQAMKFDDAYFITPLPTPIDLPALIREYRKVEGLRHKVVVERIGFAKSLVVLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRN--ERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGEDELPTKEPXXXXXXEKHGSRP-SSSALGLRLNVAFNYVQCLDSILGVISDASTTTFKFSLSLKISDVQKEARAPVKRAKHSWKKI--GELPPIGTPAVSKLSPLPSLDAGIFPKHPPGVGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDVFPELPIVAFSAEESDQIQAEALDVMVGFIKKPADSKVVERTIREHARRRL 1785
            MA   +++ F IT+V+DE+VA++++RK +VG+ FVE+FEE D+                         G   EAEELKDFFNKAPIALHWLS+ GK+LWANDRELEVLGYSREEYIGADIM FCPDS++GVLEIFK+LGTGNTIRDVP+RFRTK G ++ LLIDSNVNYKSDG+FNHTRCFIRDDTGRIL+E R+E AATAA KLA  KERFSSKLLH       L +LSGL ASV +AMKFDD Y + P+PT   L +LI EYR +E  RH+VVV+ IGF  SLVV+AD  MIRTVL+ELVAHADGRSP  A + LSVER  G           +FEFRV +SGE+LDESRVEK+FH YWLG  D L   +                  A GLRLNVAFNYVQCLDSIL V SD S+TTF F L L+ S    +        KH W KI    LPPI +P  S  S + SL              Y  + +H+LIVEDNTICQKMCK+IV  LGHT DTADNGAIAVE AT +++NIYDLVLMD+RMPVMDGI AA +I   FPELPIVA SAEE +  +  AL VM  F+ KP  +  V + I+E+AR  L
Sbjct:    1 MALVEMNATFSITSVSDEFVAKLVARKAAVGTSFVEMFEEEDRTRHXXXXXXXXXXXXXXXXXXXXXXGASSEAEELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDGVLEIFKELGTGNTIRDVPIRFRTKVGNIKHLLIDSNVNYKSDGTFNHTRCFIRDDTGRILKECRSEVAATAARKLAEGKERFSSKLLHA------LTALSGLVASVAKAMKFDDGYVVKPVPTSFSLSSLIGEYRNIETARHEVVVQEIGFDASLVVIADAIMIRTVLNELVAHADGRSPVSARVVLSVERIAGGKGGXXXXXXXKFEFRVTDSGEELDESRVEKVFHNYWLGDADVLGGGDGERADLPRLSEELSCDEEAPGLRLNVAFNYVQCLDSILRVASDGSSTTFNFVLDLETSSNGSQGPKREAEEKHHWNKITPSSLPPI-SPRTSTQSFVGSL--------------YNSDSRHILIVEDNTICQKMCKKIVTGLGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHKKFPELPIVALSAEEGESTKDAALAVMATFMSKPTKADRVGKVIQEYARNPL 592          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A7S1IY81_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IY81_9EUGL)

HSP 1 Score: 287 bits (734), Expect = 6.790e-84
Identity = 217/608 (35.69%), Postives = 312/608 (51.32%), Query Frame = 1
Query:  187 ELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHLRSLS------GLCASVVQAMK-----FDDAYFITPLPTPIDLPALIREYR--KVEGLRHKV---VVERIGFAKSLVVLADGKM---------------------IRTVLDELVAHADGRSPAGASIRLSVERKRGRNE-----RGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGG--EDELPTKEPXXXXXXEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISDASTTTFKFSL------------SLKISDVQ----------------KEARAPVKRAKHSWKKIGELPPIGTPAVSKLSPLPSLDAGIFP-----KHPPG---VGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRD-VFPELPIVAFSAEESDQIQAEALDVMVG-FIKKPADSKVVERTIR 1764
            E  DFFNKAPIALHWLS  G VLWAN+ EL VLGY+ EEYIG  IM FCPD +E VLEIFKQLG+GNTIRDVPVRFRTK+G ++ LLIDSNVNYK DGSFNHTRCFIRDDT R + EARAE+       + ++K++F  K  H ++TP H+ S++       L   V +A +         + I+ L   +    +  E +  K+E     +   + + + F +S+     GK+                     +  +L+ L+++    +  G S+ L V              G+E   F F V ++  ++ E ++ +++ +YW GG  +D   T+               S   LGL L+VAFN VQ +   L V S+A  TTF F +             L++ D++                KEA A V+RA  + ++  EL  I  P +  L+    +DA +       K  P    +G       H+L+V+DNT+CQ + K   + +    D A +GAIAV M  + D  +YD VLMD+RMPVMDG  A   +R+ V    PI+A +AE +  ++  AL+      + KP   +V+E T+R
Sbjct:  148 EFADFFNKAPIALHWLSDTGHVLWANETELNVLGYTAEEYIGQPIMKFCPDEEELVLEIFKQLGSGNTIRDVPVRFRTKSGDIKHLLIDSNVNYKVDGSFNHTRCFIRDDTARKVNEARAEAREKTYQDVMKQKDQFVQKTFHEVRTPCHMISMALENIRCHLPKDVPEAHEQLLHAVSQTFHISKLAEDVSWAMMFAEGKVPKLEQTNFDLQGAIQDTLSFVRSMHPEKKGKVTLGLDIPSDVPTDSVYGYKGALERILNHLLSNGLKFTQVG-SVTLYVAYSTASEPPADLPSGQEAGVFTFTVKSTSPEIPEDKIHQLWQKYWQGGGKDDHQQTQ------------LTDSIDGLGLGLHVAFNMVQLVGRQLEVRSNADMTTFWFEMPATVWRSTATDGELELDDLESTNRDTTSSSDALTLAKEAAAAVQRASIN-RRQPELEWI--PMMDCLAAKQHVDAAVVANMTEAKQIPKSLRLGQRQGGRAHILVVDDNTVCQSVLKLAFQQMVIKCDVAWHGAIAVTMV-EADPTLYDAVLMDLRMPVMDGYQATKLLREKVKYTRPIIALTAEHAPAVKEMALEAGCNSMLSKPVSKQVLEATLR 738          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A6U6BI43_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BI43_GUITH)

HSP 1 Score: 281 bits (719), Expect = 2.260e-81
Identity = 201/568 (35.39%), Postives = 289/568 (50.88%), Query Frame = 1
Query:  169 GMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL-----RSLSGLCASVVQAMKFDDAYFITPLPT---------------------------PIDLPALIREY---RKVEGLRHKVV-----------------VERIGFAKSLV---VLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGEDELPTKEPXXXXXXEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISDAST-TTFKFSLSLKISDVQKEARAPVKRAKHSWKKIGELPPIGTPAVSKLSPLPSLDAGIFPKH----PPGVGIYGF--EHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIR-DVFPELPIVAFSAEESDQ 1683
            G     EL DF NKAPIA+HWLS  G VLWAN+ EL +LGY+ EEYIG  IM+FCPD KE VLEIFK LG+GNTI+DVPVRFR K GK++DLLIDSNVN+  DG+F HTRCFIRDDTGR +RE R         +LA+ K+ F  K  H I+TP H+       L      +  A  F +A+ +  L T                           P  +   I +     +  GL   VV                 V +  F    +   V+ D + ++ VL  L+ ++  R  +  SI+L+V       +     +++ F V ++G  ++E +V++ FH+YW     +   K+       ++HG       LGL LNV+F+ VQCL   L   S      TF+F++    +      R+  + A  S     +  P  T   +    +  + A          PP VGI        HVLIV+DN++C K+ +R+ ++L  T + A +G  A  M  K++ + +D++LMD+RMPVMDG+ A  KIR ++  ++PIVAF+AE  +Q
Sbjct:  151 GQPSERELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDEKELVLEIFKTLGSGNTIKDVPVRFRDKKGKIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDIFVRKTFHEIRTPCHILWNHVAILEEQMKEMKLATSFTEAFGVAKLQTNRLLRIANDAADVTMFEMGKVPVLKVNPFSIKETIADICSELEEHGLSQDVVCSVVLGEKEGEAVPFSQVSKAAFKPDKIPDSVMGDARHLKRVLHHLLENSI-RVTSKGSIKLTVGFWPASQDMP---NRYCFTVTDTGPGIEELKVQECFHKYWTQVTLDGGAKKEFDDLSRDQHG-------LGLGLNVSFHLVQCLGGQLECSSSLGQGATFRFTVPFPAAQGSNMERSQEQFANLSVGDSSQSVPSWTDVTASGEAMRHIVAEARETAEVNLPPAVGISNELKRRPHVLIVDDNSVCLKVARRMFEDLKCTTEVASHGLQAF-MIVKENPSCFDMILMDLRMPVMDGVEATRKIRQELQSDIPIVAFTAEMMEQ 706          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A7S0HSS8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HSS8_9CRYP)

HSP 1 Score: 273 bits (699), Expect = 9.640e-78
Identity = 199/572 (34.79%), Postives = 290/572 (50.70%), Query Frame = 1
Query:  169 GMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLH-LRSLSGLCASVVQAMK----FDDAYFITPLPT---------------------PI-------------DLPALIREYRKVEGLRHKVVV-ERIGFAKSL---------------VVLADGKMIRTVLDELVAHADGRSPAGASIRLSV---ERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGE-DELPTKEPXXXXXXEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISDAST-TTFKFSLSLKISDVQKEARAPVKRAKHSWKKIGELPPIGTPAVSKLSPLPSLDAGIFP----KHPPGVGIYGF--EHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDVFP-ELPIVAFSAEESDQ 1683
            G     EL DF NKAPIA+HWLS  G VLWAN+ EL +LGY+ EEYIG  IM+FCPD  E VLEIFK LG+GNTI+DVPVRFR K G ++DLLIDSNVN+  DG+F HTRCFIRDDTGR +RE R         +LA+ K+ F  K  H I+TP H L +   +    ++ MK    F++ + +    T                     P+             D+   + E+   + + + VV+ E+ G A S                 V+ D + ++ VL  ++ +A  R  +  SI+L+V      +G   R      + F V ++G  ++E + ++ FH YW     D    K        ++HG       LGL LNV+F+ VQC+   L   S      +F F++ L  ++     +   + A  S     +  P  T        +  + A        K PP VGI        HVLIV+DN++C K+ KR+ ++L  T + A +G  A ++  +++ + +D++LMD+RMPVMDG+ A  KIR     ++PIVAF+AE  +Q
Sbjct:  153 GQPSERELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDETELVLEIFKTLGSGNTIKDVPVRFRDKKGAIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDVFVRKTFHEIRTPCHILWNHVAMLDEQIKEMKVPLGFNETFGVAKQQTNRLLRIANDAADVTMFEMGKVPVLKVNSFSIKETIADICVELEEHGLSQNVEYSVVLGEKEGQAVSFSQVSKANFKPDKIPDAVMGDARHLKRVLYHILENAI-RVTSKGSIKLTVGFWPASQGMPNR------YSFTVTDTGPGIEELKAQECFHNYWTKVTLDGAAAKNDFDDLARDQHG-------LGLGLNVSFHLVQCMGGQLECSSSLGHGASFSFTVPLPAAEGNSSQQTQEQFASLSMDGSSQTVPSWTDVTHSHEAMRHIVAEARETAEVKLPPAVGISNELKRRPHVLIVDDNSVCLKVAKRMFEDLKCTTEVASHGLQAFKII-EENPSCFDMILMDLRMPVMDGVEATRKIRQELQCDIPIVAFTAEVMEQ 709          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A6U6BCV4_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BCV4_GUITH)

HSP 1 Score: 266 bits (679), Expect = 1.880e-76
Identity = 190/546 (34.80%), Postives = 272/546 (49.82%), Query Frame = 1
Query:  169 GMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL-----RSLSGLCASVVQAMKFDDAYFITPLPT---------------------------PIDLPALIREY---RKVEGLRHKVV-----------------VERIGFAKSLV---VLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGEDELPTKEPXXXXXXEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISDAST-TTFKFSLSLKISDVQKEARAPVKRAKHSWKKIGELPPIGTPAVSKLSPLPSLDAGIFPKH----PPGVGIYGF--EHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAAL 1620
            G     EL DF NKAPIA+HWLS  G VLWAN+ EL +LGY+ EEYIG  IM+FCPD KE VLEIFK LG+GNTI+DVPVRFR K GK++DLLIDSNVN+  DG+F HTRCFIRDDTGR +RE R         +LA+ K+ F  K  H I+TP H+       L      +  A  F +A+ +  L T                           P  +   I +     +  GL   VV                 V +  F    +   V+ D + ++ VL  L+ ++  R  +  SI+L+V       +     +++ F V ++G  ++E +V++ FH+YW     +   K+       ++HG       LGL LNV+F+ VQCL   L   S      TF+F++    +      R+  + A  S     +  P  T   +    +  + A          PP VGI        HVLIV+DN++C K+ +R+ ++L  T + A +G  A  M  K++ + +D++LMD+RMPVMDG+   L
Sbjct:  151 GQPSERELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDEKELVLEIFKTLGSGNTIKDVPVRFRDKKGKIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDIFVRKTFHEIRTPCHILWNHVAILEEQMKEMKLATSFTEAFGVAKLQTNRLLRIANDAADVTMFEMGKVPVLKVNPFSIKETIADICSELEEHGLSQDVVCSVVLGEKEGEAVPFSQVSKAAFKPDKIPDSVMGDARHLKRVLHHLLENSI-RVTSKGSIKLTVGFWPASQDMP---NRYCFTVTDTGPGIEELKVQECFHKYWTQVTLDGGAKKEFDDLSRDQHG-------LGLGLNVSFHLVQCLGGQLECSSSLGQGATFRFTVPFPAAQGSNMERSQEQFANLSVGDSSQSVPSWTDVTASGEAMRHIVAEARETAEVNLPPAVGISNELKRRPHVLIVDDNSVCLKVARRMFEDLKCTTEVASHGLQAF-MIVKENPSCFDMILMDLRMPVMDGVEVGL 684          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A7S0I051_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I051_9EUKA)

HSP 1 Score: 254 bits (650), Expect = 2.320e-71
Identity = 208/654 (31.80%), Postives = 297/654 (45.41%), Query Frame = 1
Query:  175 EEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDG----SFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL--RSLSGLCASVVQ---------------------------------------AMKFDDAYFITPLPTPIDLPALIREY--RKVEGLRHKVVVERIGFAKSLVVLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGR------NERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLG----------------GEDELPTKEPXXXXXXEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISD--ASTTTFKFSLSLKISDVQKEARAPVKRA-------------------KHSWKKIG--ELPPIGTPAVSKLSPLP-------------SLDAGIFPKHPP-----------GVGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDVFPELPIVAFSAEESDQIQAEALDV-MVGFIKKPADSKVVERTIREHARRRL 1785
            E+  EL DFF  APIALHWLS  G V+WAN  EL+VLGY+ EEYIG  IM FCPD +E VLEIFK LG+GN I+DVPVRFRTK+GK+  LLIDSNV YK D     +FNHTRCFIRDDTGR +REAR E+    A +  +  + F S+ LH IKTP H+  +SL  + A V++                                        M+F+    +  +PT + L A+ R    R     + +V V     A   VV  D +++   L  L+A+A   +PAG +I L V    G          G  E +  F V ++G  L +     +F +Y  G                 E E    E              +   LG+ LN+ +  V+ L   L   S      TTF F     +  V   A  P + A                   + +W  I   E  P   P   + SP                L +  F +              G G+   +  HVL+VED T+C  + + ++K LG ++D A++G  A+E     +  ++ LVLMD+RM VMDG  AA+ I+ +  ++PI+A +A+ S + +A   ++    F  KP  ++ +   + +H   +L
Sbjct:  151 EKDAELIDFFQNAPIALHWLSGTGHVMWANQTELDVLGYTAEEYIGQPIMKFCPDEEELVLEIFKTLGSGNIIKDVPVRFRTKSGKIVPLLIDSNVAYKVDDKGEKAFNHTRCFIRDDTGRRVREARTEALLKEAERSLKMLDAFVSRTLHLIKTPCHIAQQSLGLINARVLELSARLPEAEQRWVDGTRMLLDGSMQQLAEVTDLVTDASDVMRFEQGAVMQTVPTELPLLAVGRAVCGRAATLCKKRVAVTFDFAAGPSVVKLDSRVLHRALSHLLANAAEATPAGGTITLRVTHATGYAAPTEGEVGGAPEPRVCFEVHDTGRGLPDGGSSAIFQRYSPGISPLSSPEQNSAATRTPEQEAMAVEKARLGLEASLSFTNAKKGLGIGLNLTYGLVRSLGGELRFRSKDGGGDTTFYFE----VPAVDASAPVPAESAECGIAPEAKAAAPGWAQSRRCNWDSIAAAEPKPSANPPAVERSPSAVTSEDLSSRVEDLELSSRAFDEPTSWKKVIEASCVAGTGLKAMDKPHVLVVEDTTMCADVLRVMLKQLGCSSDHAEHGEQALEQLMFSEPGLHTLVLMDLRMNVMDGFSAAMAIKKMGMDVPIIAVTADGSQETRARCKEIGFDDFATKPLLAETMAALLEKHTGHKL 800          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A6T8PDH9_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8PDH9_HEMAN)

HSP 1 Score: 254 bits (649), Expect = 5.360e-71
Identity = 218/676 (32.25%), Postives = 303/676 (44.82%), Query Frame = 1
Query:  136 ISGALARAADGGMEEAE-ELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL----------------------------RSLSGLCASVVQAMKFDDAYFITPLPTPIDLPALIREYRKV--EGLRHKVVVERI---------GFAKSLVVLA---------DGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYW----------------LGGE-DEL---------PTK----------EPXXXXXXEKHGSRPSSS-------------------------------ALGLRLNVAFNYVQCLDSILGVISDASTTTFKFSLSLKISDVQKEARA-----PVKRAKHSWKKIGELPPIGTPAVSKLSPLPSLDAGIFP---------KHPPGVGIYGFEHK--HVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDV-FPELPIVAFSAEESDQIQAEALDV-MVGFIKKPADSKVVERTI 1761
            +SG +        + +E EL DF NKAPIA+HWLS  G VLWAN+ E+ VLGY+ EEYIG  IM+FCPD +E VLEIFK LG+GNTI+DVPVRFR K G++ DLLIDSNVN+ +DGSF HTRCFIRDDT R +REAR    A    +L  +K  F  K  H I+TP HL                              L+ L    V A  FD          P +L   I +  +   +  +  V V  +          +++ L + A         D K I  V++ L+ +A   +  G ++ L V    G      EE      V ++G  ++E++V+  F +YW                 G + DE+         P+K          +         HGS+   S                                LG+ LNV  N VQC+   L   +    TTF   L L  +     A A     P              PP       + SPL  +   I P         K PP VG+    +   +VL+V+DN IC K+   +V  LG T DTA +G  AV+  +     +YDLV MD+RMPV+DGI AA  ++++   ++PIVA +AE   +++ + ++    GFI KPA   V++  I
Sbjct:  150 VSGRMTTVVSEEKKASEKELIDFLNKAPIAMHWLSGTGHVLWANETEMNVLGYTAEEYIGQPIMNFCPDERELVLEIFKTLGSGNTIKDVPVRFRKKNGEIVDLLIDSNVNWNTDGSFKHTRCFIRDDTARKIREARLSEMAIRDRELVEQKSAFVRKTFHEIRTPCHLLRHLLSNFEDVTSEYEKESAFKDIIKQVNRLNRLVDDSVDAALFDSGKVPVLERRPFNLVDTINDVLQSLEDSTQRSVSVGHLVSFRSETPTDWSQGLQIKASDVNPWFKGDAKKIGRVVEHLLDNALKFTSKG-TVSLDVNISPGLPN---EETLVFLTVRDTGPGMNETQVQNAFSKYWQDMSAVTTSPQQEAAKAGSKADEINALLSKLSDPSKSLLIGNKSRRQSVLSSQSSDHGSQALGSHSTWSPTVDAGTATADSEASDAIGKDYEEVQGLGVGLNVINNIVQCMGGSLEFETKPGETTFVICLGLPAAVPPTSAEASSAFLPKAPXXXXXXXXXXEPPAAGWCQVEESPLAQMHVDINPAEPSPAKEEKKPPPVGLAAMTNSKPNVLLVDDNMICLKVLSNLVGKLGCTYDTAQHGLEAVQKVSAGP-ELYDLVFMDLRMPVLDGIQAAKIVQELTHRKVPIVALTAEVGAEVREDCMEAGFDGFISKPAGRAVIKSEI 820          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A7S3FI59_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FI59_9EUKA)

HSP 1 Score: 249 bits (635), Expect = 1.860e-69
Identity = 208/639 (32.55%), Postives = 289/639 (45.23%), Query Frame = 1
Query:  175 EEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDG----SFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLH-----------------------------------------LRSLSGLCASVVQAMKFDDAYFITPLPTPIDLPALIRE-YRKVEGLRHKVVVER--IGFAKSLVVLADGKMIRTVLDELVAHADGRSPAGASIRLSV-ERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGEDELPTKEPXXXXXXEKHG---------------SRPSSSALGLRLNVAFNYVQCLDSILGVISDASTTTFKFSL-----------------SLKISDVQKEARAPVKR-AKHSWKKIG-----------------ELPPIGTPAVSKLSPLPSLDAG------IFPKHPPGVGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRD-VFPELPIVAFSAEESDQIQAEALDVMVG-FIKKPADSKVVERTIREH 1770
            E+  EL DFF  APIALHWLS  G V+WAN  EL+VLGY+ EEYIG  IM FCPD +E VLEIFK LG+GN I+DVPVRFRTKAGK+  LLIDSNV YK D     +FNHTRCFIRDDTGR +REAR E+      +     + F S+ LH +KTP H                                         L  +S L       M+F+    +  +P  + L  L R    +V  L    V  R  IG   S++ L D K++   L  L+ +A   +PAG SI LSV   ++  +  G    +  F+VA++G  L  S    +F +Y+ G    L    P         G               S   S+ L    N+ ++ V+ L   L   S    T F F L                 +  +         P +  A ++W  I                  E     T A+S  SP   +D        +        G+   +  HVL+VED  +C  + + ++  LG ++D A+NGA AVEM    D  +Y LV+MD+RMPVMDG  A   I++ +  ++P+VA +A+E+  I+ + +      F  KP     +   + +H
Sbjct:  130 EKDAELIDFFQNAPIALHWLSGTGHVMWANQTELDVLGYTAEEYIGQPIMKFCPDEEELVLEIFKTLGSGNIIKDVPVRFRTKAGKIVPLLIDSNVAYKVDDKGEKAFNHTRCFIRDDTGRRIREARVEAMLKETKRSLTVLDAFVSRTLHLVKTPCHVVQTSMGLLSAHLSALVARMPNSEAQIASETRVLLEGSMAQLSEVSELINDASDVMRFEQGAVLQTVPVSLPLQVLGRSCVDEVLSLVKSGVSVRLDIGAGPSILSL-DAKVLHRALRHLLRNAAQATPAGGSITLSVTHEEKSSSWAGNATHRVRFQVADTGCGLPMS-ASNIFQRYYPGP---LEATAPNGESKQVSEGAIDKAQENLASSLSFSSGKSTGLXXXXNLTYSLVRALGGELRFDSKFGDTRFWFVLPADGAQNHEPSVSYSAGAASLGGAGGTGAMPKRMPASYNWDSISSESDSERRGIASDTSDSEASGGTTRAIS--SPREFIDVPSSGEKTVLASCLASTGLKACDSPHVLVVEDTEMCATVVRMLLGKLGCSSDHAENGAEAVEMLKTADPGLYSLVIMDLRMPVMDGFDATRAIKEELLLDVPVVALTADETFDIREKCVAASFNDFATKPLKYDALAALLHKH 761          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: A0A8J5X0X6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0X6_DIALT)

HSP 1 Score: 243 bits (621), Expect = 8.660e-68
Identity = 206/615 (33.50%), Postives = 288/615 (46.83%), Query Frame = 1
Query:  148 LARAADGGM-------EEAEE--------LKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSREEYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL--------------RSLSG--------------------LCASVVQ-------AMKFDDAYFITPLPTPIDLPALIR----EYRKVEGLRHKVVVERIGFAKSLVVLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGEDELPTKEPXXXXXXEKHGSRPSS-----SALGLRLNVAFNYVQCLDSILGVISDASTTTFKFSLSLKISDVQKEARAPVKRAKHSWKKIGELPPIGTP-----AVSKLSPLPSLDAGIFPKHPPGV--GIYGFEHK-HVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIR-DVFPELPIVAFSAEESDQIQAEALDVMVGFIKKPADSKVVERTIREH 1770
            L+RA DGG+        EA+E         +DF  +APIA+HWLS  G VLWAND EL +LGYSREEYIG  IM+FCPD +E VLEIFKQLG+GN I+DVPVRFR K G++  LLIDSNVNY   G FNHTRCFIRDDTGR +REA+ E   + A + A+  ++F S+ LH I+TP HL              R+  G                    L   +V+       +++FD+   +     P D+  L R    +  ++   R  V +     A    V  D  ++  VL  L+ +A   + AG   R+++    G        D   F V ++G+ L+   V  +F +Y       L   +           ++  S       +G+ L++ ++    L + L   S    T F F L    ++      AP        + +   P + TP     A S  +  P+  A   PK       GI+       VL+V+D+  C KM    +K  G T DTA++G+ AVE         Y LVLMD+RMPVMDG  A    R ++   +PIVA SAEE   I         GF  KP  ++ +   +  H
Sbjct:  100 LSRAPDGGIVLVAEAVTEADEEQRAKDAEFQDFLQRAPIAMHWLSGTGHVLWANDTELRILGYSREEYIGKPIMNFCPDEEEIVLEIFKQLGSGNAIKDVPVRFRAKDGRIVPLLIDSNVNYTDAGDFNHTRCFIRDDTGRRVREAQVEMQLSEARRTAQLFDQFVSRTLHLIRTPCHLLLHNLEELGERSRERAAGGGEGGEGGTPTVGALLSSSTRLVTRIVEMTRDFTDSLRFDECATLVLHTAPHDVRQLARAAIDDAARLGLCRQGVALSAHVDAGGASVKTDSAVLGRVLRHLLRNAAHATSAG---RVTLRVTHG-------PDGVTFAVVDTGKGLESDDV-NIFQRYRQPAHAALAEADGATLDQHRASLAKDLSLDSGHEGIGIGLSLCYSLCNALGAELRYASRPGATRFWFELPRTRAEADASGAAP--------ELVYNAPEVDTPLEAPTAGSSATWEPATLARAEPKAAAVAERGIFDARAPMRVLVVDDSPFCLKMVCTRLKRFGFTYDTAEDGSKAVEALRDPPPGGYALVLMDLRMPVMDGYEATRIARTELGATMPIVAVSAEEGVDISR-----FDGFEPKPLSTERLRAALCAH 690          
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Match: L1J164_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J164_GUITC)

HSP 1 Score: 242 bits (617), Expect = 2.490e-66
Identity = 218/706 (30.88%), Postives = 315/706 (44.62%), Query Frame = 1
Query:   25 DFVITAVNDEYVAQVMSRKGSV----GSKFVEVFEEPDQETISGALARAADGGMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSRE-----EYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLIDSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFSSKLLHNIKTPLHL-----RSLSGLCASVVQAMKFDDAYFITPLPT---------------------------PIDLPALIREY---RKVEGLRHKVV-----------------VERIGFAKSLV---VLADGKMIRTVLDELVAHADGRSPAGASIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYW------------------LGGEDELPTKEPXXXXXXEK----HGSR-PSSSALGLRL---------------NVAFNYVQCLDSILG----VISDASTTTFKFSLSLK--ISDVQKEARAPVKRAKHSWKKIGELPPIGTPAVSKL--------------SPLPSLDAGIFPKHPPGVGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTADTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDVF--PELPIVAFSAEESDQIQAEALDVMVGFIKKPADSKVVERTIREH 1770
            D+ ++  +D++V  +MS + S+     ++F  +   P  +++        + G     EL DF NKAPIA+HWLS  G VLWAN+ EL +LGY+ E           IM+FCPD KE VLEIFK LG+GNTI+DVPVRFR K GK++DLLIDSNVN+  DG+F HTRCFIRDDTGR +RE R         +LA+ K+ F  K  H I+TP H+       L      +  A  F +A+ +  L T                           P  +   I +     +  GL   VV                 V +  F    +   V+ D + ++ VL  L+ ++  R  +  SI+L+V       +     +++ F V ++G  ++E +V++ FH+                    +G  +EL  +         +    +GSR P +  + +RL                +      C D IL      + D    T K    L+  I  V   A       +    + G    I  PA   +              S L SL     P+ P             LIVEDNTICQK+ K++++ +G   + ADNGAIA+++    D    D +LMD+RMPVMDG  A  KIR      ELP+VA +AE  D  Q E      G + KPAD KV++  I +H
Sbjct:  164 DWTLSKFDDKHV--IMSGRMSIMDPASARFALLVLNPFADSLLTCSVAHENTGQPSERELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEVNESGREFWRPIMNFCPDEKELVLEIFKTLGSGNTIKDVPVRFRDKKGKIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDIFVRKTFHEIRTPCHILWNHVAILEEQMKEMKLATSFTEAFGVAKLQTNRLLRIANDAADVTMFEMGKVPVLKVNPFSIKETIADICSELEEHGLSQDVVCSVVLGEKEGEAVPFSQVSKAAFKPDKIPDSVMGDARHLKRVLHHLLENSI-RVTSKGSIKLTVGFWPASQDMP---NRYCFTVTDTGPGIEELKVQECFHKAMRHIVAEARETAEVNLPPAVGISNELKRRPHVLIVDDNRLEVHYGSRFPRAPGVHVRLLLGQRRSMLTPPALPRIVKENPSCFDMILMDLRMPVMDGVEATRKIRQELQSDIPIVAFTAEGEQMMEQEVLNESGFNSIINKPATKGILSSHLFNLVINKTGSLLTSLMQEKKPEEPKQPEDKASRKVKCLIVEDNTICQKVAKKMLEKMGCVCECADNGAIAIDLLNA-DPKRADFILMDLRMPVMDGFEATQKIRKELNRSELPVVALTAEVVDDSQMELFH---GVLNKPADVKVLKAEIAKH 859          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14608.3364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR65_ECTSI4.390e-22058.40N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S1IY81_9EUGL6.790e-8435.69Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6U6BI43_GUITH2.260e-8135.39Hypothetical protein n=3 Tax=Guillardia theta TaxI... [more]
A0A7S0HSS8_9CRYP9.640e-7834.79Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6U6BCV4_GUITH1.880e-7634.80Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0I051_9EUKA2.320e-7131.80Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A6T8PDH9_HEMAN5.360e-7132.25Hypothetical protein n=3 Tax=Hemiselmis andersenii... [more]
A0A7S3FI59_9EUKA1.860e-6932.55Hypothetical protein n=2 Tax=Haptolina ericina Tax... [more]
A0A8J5X0X6_DIALT8.660e-6833.50Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
L1J164_GUITC2.490e-6630.88Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14608contigL-elsbetiae_contig14608:1204..3380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score632.9
Seed ortholog evalue1.5e-178
Seed eggNOG ortholog2880.D8LR65
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphorelay sensor kinase activity
EggNOG OGsCOG0642@1,KOG0519@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPAS, histidine kinase, response regulator protein
Ec32 orthologEc-06_004190.1
Exons4
Model size1811
Cds size1788
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14608.3364.1prot_L-elsbetiae_contig14608.3364.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14608 1204..3357 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.298792-CDS-L-elsbetiae_contig14608:1203..13831622815587.298792-CDS-L-elsbetiae_contig14608:1203..1383Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 1204..1383 +
1691682975.8346913-CDS-L-elsbetiae_contig14608:1203..13831691682975.8346913-CDS-L-elsbetiae_contig14608:1203..1383Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 1204..1383 +
1622815587.3146524-CDS-L-elsbetiae_contig14608:1536..19921622815587.3146524-CDS-L-elsbetiae_contig14608:1536..1992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 1537..1992 +
1691682975.8441076-CDS-L-elsbetiae_contig14608:1536..19921691682975.8441076-CDS-L-elsbetiae_contig14608:1536..1992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 1537..1992 +
1622815587.3261068-CDS-L-elsbetiae_contig14608:2052..25381622815587.3261068-CDS-L-elsbetiae_contig14608:2052..2538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 2053..2538 +
1691682975.8520148-CDS-L-elsbetiae_contig14608:2052..25381691682975.8520148-CDS-L-elsbetiae_contig14608:2052..2538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 2053..2538 +
1622815587.3377135-CDS-L-elsbetiae_contig14608:2691..33571622815587.3377135-CDS-L-elsbetiae_contig14608:2691..3357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 2692..3357 +
1691682975.8595717-CDS-L-elsbetiae_contig14608:2691..33571691682975.8595717-CDS-L-elsbetiae_contig14608:2691..3357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14608 2692..3357 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.3488412-UTR-L-elsbetiae_contig14608:3357..33801622815587.3488412-UTR-L-elsbetiae_contig14608:3357..3380Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14608 3358..3380 +
1691682975.8673606-UTR-L-elsbetiae_contig14608:3357..33801691682975.8673606-UTR-L-elsbetiae_contig14608:3357..3380Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14608 3358..3380 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14608.3364.1

>prot_L-elsbetiae_contig14608.3364.1 ID=prot_L-elsbetiae_contig14608.3364.1|Name=mRNA_L-elsbetiae_contig14608.3364.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=596bp
MAFALLDSDFVITAVNDEYVAQVMSRKGSVGSKFVEVFEEPDQETISGAL
ARAADGGMEEAEELKDFFNKAPIALHWLSSNGKVLWANDRELEVLGYSRE
EYIGADIMDFCPDSKEGVLEIFKQLGTGNTIRDVPVRFRTKAGKVQDLLI
DSNVNYKSDGSFNHTRCFIRDDTGRILREARAESAATAAIKLAREKERFS
SKLLHNIKTPLHLRSLSGLCASVVQAMKFDDAYFITPLPTPIDLPALIRE
YRKVEGLRHKVVVERIGFAKSLVVLADGKMIRTVLDELVAHADGRSPAGA
SIRLSVERKRGRNERGEEEDQFEFRVANSGEKLDESRVEKMFHQYWLGGE
DELPTKEPTSEPTKEKHGSRPSSSALGLRLNVAFNYVQCLDSILGVISDA
STTTFKFSLSLKISDVQKEARAPVKRAKHSWKKIGELPPIGTPAVSKLSP
LPSLDAGIFPKHPPGVGIYGFEHKHVLIVEDNTICQKMCKRIVKNLGHTA
DTADNGAIAVEMATKQDVNIYDLVLMDIRMPVMDGIVAALKIRDVFPELP
IVAFSAEESDQIQAEALDVMVGFIKKPADSKVVERTIREHARRRL*
back to top

mRNA from alignment at L-elsbetiae_contig14608:1204..3380+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14608.3364.1 ID=mRNA_L-elsbetiae_contig14608.3364.1|Name=mRNA_L-elsbetiae_contig14608.3364.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2177bp|location=Sequence derived from alignment at L-elsbetiae_contig14608:1204..3380+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTTTGCCTTGCTGGACTCCGACTTTGTGATAACGGCGGTAAATGA CGAGTACGTGGCACAAGTGATGAGTAGAAAGGGCTCGGTTGGGTCAAAAT TCGTGGAGGTTTTCGAAGAGCCGGATCAAGAAACTATCAGCGGCGCTTTA GCTCGCGCGGCAGATGGCGGCATGGAGGAAGTCCCAGGCGTGAGCTTGTT CTCTTGCGGGCCCGGTCCGAATGACTTTCCGCAAAACGTGGTTTACAATT GGACCATTCTGAAACACGGCAACAGTGGCTTCCTCGCCGCTGCAGCCCCG GTCGCCCGCACAACCGGCGCATTGTCGTGGGAGGCCGAAGAGCTCAAGGA TTTCTTCAACAAGGCTCCCATCGCACTGCACTGGCTCTCTTCAAACGGGA AAGTGCTTTGGGCTAACGACCGCGAGCTCGAGGTGCTTGGCTACTCCAGG GAAGAGTACATAGGGGCAGACATAATGGACTTCTGTCCAGACTCGAAAGA GGGCGTCCTGGAGATTTTCAAGCAGCTTGGGACGGGCAACACGATTCGCG ACGTCCCCGTCAGGTTTCGCACAAAGGCCGGAAAGGTCCAAGACCTGTTG ATAGATTCCAACGTCAACTACAAATCGGACGGGTCTTTCAACCACACGCG GTGCTTCATCCGGGACGACACGGGCCGAATTTTGAGAGAGGCTCGAGCGG AATCGGCGGCGACTGCGGCCATCAAGCTCGCCCGAGAAAAAGAACGCTTC TCGTCTAAGCTTCTTCACAACATCAAGACTCCTCTGCACGTCATGAGCAT GAGCTTGTCAGACCCAGCCTCCGTGAATGTGCCCGTCCTGTTGTCTCAGC TGAGAAGCCTTTCGGGGCTGTGTGCAAGCGTCGTCCAGGCCATGAAGTTC GACGACGCGTACTTCATCACGCCCCTGCCGACCCCGATAGACCTGCCTGC TCTCATCAGAGAGTACCGGAAGGTGGAAGGCCTGAGGCACAAGGTTGTCG TTGAAAGAATAGGTTTCGCCAAGTCTCTGGTCGTGCTTGCGGACGGGAAG ATGATCAGGACGGTGCTCGACGAGCTCGTCGCCCACGCAGACGGACGGAG CCCCGCGGGGGCATCGATACGGCTGTCCGTGGAGCGCAAGAGAGGTCGCA ACGAGCGGGGAGAAGAAGAGGATCAATTCGAGTTCAGGGTGGCGAACAGC GGGGAAAAGCTGGACGAGTCTCGCGTCGAAAAGATGTTCCACCAATATTG GCTTGGAGGAGAAGATGAACTGCCGACGAAGGAGCCGACGAGCGAGCCGA CGAAGGAGAAGCACGGCAGCCGCCCATCGTCTTCGGTCAGCGAACAGCCC CCGAGCGAATCAGGGAAGCTGCTCGCTTGGAATGAGGATGCGGAGCACGG CAGCCGCCCATCGTCTTCGGTCAGCGGGCAGCCCCGGAGCGAATCAGGGG AGCTGCTCGCTTGGGATGAGGATGCGCTAGGTGACGAGGCGCTGGGCCTG CGGCTTAACGTGGCTTTCAACTACGTGCAGTGCCTCGACTCTATTCTAGG AGTTATTTCTGACGCATCGACAACGACGTTCAAGTTCAGCCTTTCCCTCA AGATCTCGGATGTTCAAAAAGAAGCGAGGGCACCCGTTAAGAGAGCCAAA CACAGCTGGAAAAAAATAGGAGAACTGCCCCCCATTGGTACCCCCGCCGT GTCAAAATTGTCGCCTCTCCCGAGTCTCGATGCTGGAATTTTTCCCAAGC ATCCGCCCGGCGTGGGAATCTATGGGTTCGAGCACAAGCACGTCCTGATC GTCGAGGACAACACGATCTGCCAGAAAATGTGCAAACGGATTGTGAAAAA CCTTGGCCACACAGCCGACACGGCGGACAACGGAGCTATCGCGGTCGAGA TGGCGACGAAACAGGACGTCAACATCTATGACCTTGTGCTCATGGATATC CGGATGCCGGTGATGGACGGGATTGTGGCGGCACTCAAGATACGTGACGT ATTCCCGGAGCTTCCCATTGTAGCTTTCTCGGCCGAAGAGTCGGATCAGA TACAAGCAGAGGCGCTCGACGTTATGGTCGGGTTCATAAAGAAGCCCGCG GATTCGAAAGTTGTGGAACGAACCATCCGAGAGCACGCCCGGCGGCGGCT CTGATGTGGGGAGGTATTTTCTATGTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig14608:1204..3380+

>mRNA_L-elsbetiae_contig14608.3364.1 ID=mRNA_L-elsbetiae_contig14608.3364.1|Name=mRNA_L-elsbetiae_contig14608.3364.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3576bp|location=Sequence derived from alignment at L-elsbetiae_contig14608:1204..3380+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTTTGCCTTGCTGGACTCCGACTTTGTGATAACGGCGGTAAATGA
CGAGTACGTGGCACAAGTGATGAGTAGAAAGGGCTCGGTTGGGTCAAAAT
TCGTGGAGGTTTTCGAAGAGCCGGATCAAGAAACTATCAGCGGCGCTTTA
GCTCGCGCGGCAGATGGCGGCATGGAGGAAATGGCCTTTGCCTTGCTGGA
CTCCGACTTTGTGATAACGGCGGTAAATGACGAGTACGTGGCACAAGTGA
TGAGTAGAAAGGGCTCGGTTGGGTCAAAATTCGTGGAGGTTTTCGAAGAG
CCGGATCAAGAAACTATCAGCGGCGCTTTAGCTCGCGCGGCAGATGGCGG
CATGGAGGAAGCCGAAGAGCTCAAGGATTTCTTCAACAAGGCTCCCATCG
CACTGCACTGGCTCTCTTCAAACGGGAAAGTGCTTTGGGCTAACGACCGC
GAGCTCGAGGTGCTTGGCTACTCCAGGGAAGAGTACATAGGGGCAGACAT
AATGGACTTCTGTCCAGACTCGAAAGAGGGCGTCCTGGAGATTTTCAAGC
AGCTTGGGACGGGCAACACGATTCGCGACGTCCCCGTCAGGTTTCGCACA
AAGGCCGGAAAGGTCCAAGACCTGTTGATAGATTCCAACGTCAACTACAA
ATCGGACGGGTCTTTCAACCACACGCGGTGCTTCATCCGGGACGACACGG
GCCGAATTTTGAGAGAGGCTCGAGCGGAATCGGCGGCGACTGCGGCCATC
AAGCTCGCCCGAGAAAAAGAACGCTTCTCGTCTAAGCTTCTTCACAACAT
CAAGACTCCTCTGCACGCCGAAGAGCTCAAGGATTTCTTCAACAAGGCTC
CCATCGCACTGCACTGGCTCTCTTCAAACGGGAAAGTGCTTTGGGCTAAC
GACCGCGAGCTCGAGGTGCTTGGCTACTCCAGGGAAGAGTACATAGGGGC
AGACATAATGGACTTCTGTCCAGACTCGAAAGAGGGCGTCCTGGAGATTT
TCAAGCAGCTTGGGACGGGCAACACGATTCGCGACGTCCCCGTCAGGTTT
CGCACAAAGGCCGGAAAGGTCCAAGACCTGTTGATAGATTCCAACGTCAA
CTACAAATCGGACGGGTCTTTCAACCACACGCGGTGCTTCATCCGGGACG
ACACGGGCCGAATTTTGAGAGAGGCTCGAGCGGAATCGGCGGCGACTGCG
GCCATCAAGCTCGCCCGAGAAAAAGAACGCTTCTCGTCTAAGCTTCTTCA
CAACATCAAGACTCCTCTGCACCTGAGAAGCCTTTCGGGGCTGTGTGCAA
GCGTCGTCCAGGCCATGAAGTTCGACGACGCGTACTTCATCACGCCCCTG
CCGACCCCGATAGACCTGCCTGCTCTCATCAGAGAGTACCGGAAGGTGGA
AGGCCTGAGGCACAAGGTTGTCGTTGAAAGAATAGGTTTCGCCAAGTCTC
TGGTCGTGCTTGCGGACGGGAAGATGATCAGGACGGTGCTCGACGAGCTC
GTCGCCCACGCAGACGGACGGAGCCCCGCGGGGGCATCGATACGGCTGTC
CGTGGAGCGCAAGAGAGGTCGCAACGAGCGGGGAGAAGAAGAGGATCAAT
TCGAGTTCAGGGTGGCGAACAGCGGGGAAAAGCTGGACGAGTCTCGCGTC
GAAAAGATGTTCCACCAATATTGGCTTGGAGGAGAAGATGAACTGCCGAC
GAAGGAGCCGACGAGCGAGCCGACGAAGGAGAAGCACGGCAGCCGCCCAT
CGTCTTCGCTGAGAAGCCTTTCGGGGCTGTGTGCAAGCGTCGTCCAGGCC
ATGAAGTTCGACGACGCGTACTTCATCACGCCCCTGCCGACCCCGATAGA
CCTGCCTGCTCTCATCAGAGAGTACCGGAAGGTGGAAGGCCTGAGGCACA
AGGTTGTCGTTGAAAGAATAGGTTTCGCCAAGTCTCTGGTCGTGCTTGCG
GACGGGAAGATGATCAGGACGGTGCTCGACGAGCTCGTCGCCCACGCAGA
CGGACGGAGCCCCGCGGGGGCATCGATACGGCTGTCCGTGGAGCGCAAGA
GAGGTCGCAACGAGCGGGGAGAAGAAGAGGATCAATTCGAGTTCAGGGTG
GCGAACAGCGGGGAAAAGCTGGACGAGTCTCGCGTCGAAAAGATGTTCCA
CCAATATTGGCTTGGAGGAGAAGATGAACTGCCGACGAAGGAGCCGACGA
GCGAGCCGACGAAGGAGAAGCACGGCAGCCGCCCATCGTCTTCGGCGCTG
GGCCTGCGGCTTAACGTGGCTTTCAACTACGTGCAGTGCCTCGACTCTAT
TCTAGGAGTTATTTCTGACGCATCGACAACGACGTTCAAGTTCAGCCTTT
CCCTCAAGATCTCGGATGTTCAAAAAGAAGCGAGGGCACCCGTTAAGAGA
GCCAAACACAGCTGGAAAAAAATAGGAGAACTGCCCCCCATTGGTACCCC
CGCCGTGTCAAAATTGTCGCCTCTCCCGAGTCTCGATGCTGGAATTTTTC
CCAAGCATCCGCCCGGCGTGGGAATCTATGGGTTCGAGCACAAGCACGTC
CTGATCGTCGAGGACAACACGATCTGCCAGAAAATGTGCAAACGGATTGT
GAAAAACCTTGGCCACACAGCCGACACGGCGGACAACGGAGCTATCGCGG
TCGAGATGGCGACGAAACAGGACGTCAACATCTATGACCTTGTGCTCATG
GATATCCGGATGCCGGTGATGGACGGGATTGTGGCGGCACTCAAGATACG
TGACGTATTCCCGGAGCTTCCCATTGTAGCTTTCTCGGCCGAAGAGTCGG
ATCAGATACAAGCAGAGGCGCTCGACGTTATGGTCGGGTTCATAAAGAAG
CCCGCGGATTCGAAAGTTGTGGAACGAACCATCCGAGAGCACGCCCGGCG
GCGGCTCTGAGCGCTGGGCCTGCGGCTTAACGTGGCTTTCAACTACGTGC
AGTGCCTCGACTCTATTCTAGGAGTTATTTCTGACGCATCGACAACGACG
TTCAAGTTCAGCCTTTCCCTCAAGATCTCGGATGTTCAAAAAGAAGCGAG
GGCACCCGTTAAGAGAGCCAAACACAGCTGGAAAAAAATAGGAGAACTGC
CCCCCATTGGTACCCCCGCCGTGTCAAAATTGTCGCCTCTCCCGAGTCTC
GATGCTGGAATTTTTCCCAAGCATCCGCCCGGCGTGGGAATCTATGGGTT
CGAGCACAAGCACGTCCTGATCGTCGAGGACAACACGATCTGCCAGAAAA
TGTGCAAACGGATTGTGAAAAACCTTGGCCACACAGCCGACACGGCGGAC
AACGGAGCTATCGCGGTCGAGATGGCGACGAAACAGGACGTCAACATCTA
TGACCTTGTGCTCATGGATATCCGGATGCCGGTGATGGACGGGATTGTGG
CGGCACTCAAGATACGTGACGTATTCCCGGAGCTTCCCATTGTAGCTTTC
TCGGCCGAAGAGTCGGATCAGATACAAGCAGAGGCGCTCGACGTTATGGT
CGGGTTCATAAAGAAGCCCGCGGATTCGAAAGTTGTGGAACGAACCATCC
GAGAGCACGCCCGGCGGCGGCTCTGA
back to top