mRNA_L-elsbetiae_contig145.3303.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.020e-38 Identity = 102/240 (42.50%), Postives = 132/240 (55.00%), Query Frame = 2 Query: 17 QHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASC-MRAYVNSRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLATLFRHSQKKY*SGPDRDRL---RAGVVSLFPSGRSDV 724 QH+ +MA+L AGV D G L + GREASV+FLL+Q +++ + AY NS D G T L C + + +SG +PR+VRLLVDAGAD S VR+T +G V + TPLA+TT L+EK +G+ TE+QLH L+ IRR+L RV+A+HAVSWLW SD SIV A V +ATL R S G R L +AG VSL G + V Sbjct: 3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWC-SSG--NPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKV---VDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSSPISSGRGSRRADLSKEKAGTVSLESLGETAV 236
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 129 bits (324), Expect = 3.670e-29 Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 2 Query: 5 AAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASC--MRAYVNSRDDHGQTALWCVLRFVRTSGLPS--PRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRA 523 AA QH+ +MA+L +AGV+D TG AL A+ G EASVKFLL+ ++ C AY+N+RD +G T L V T G S PR+VR+LVDAGAD SPV++ G V+ + TPLA T ++L++K D G+ T++ L LE I R+L RV+A+HAVSWLW S I RA Sbjct: 319 AASNQHLDIMAILTEAGVVD-TGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPL-----VVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVAD--GKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRA 487
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 5.230e-27 Identity = 82/175 (46.86%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 5 AAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQ-HLEKASCMRAYVNSRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRAA 526 AA+ +++ +M +L +AGV+D TG AL A+ G E +KFLL+Q K AYVN+RD G T L ++ R PRVVRLLV+AGAD SPV + G +S TPL LT +++K + G + +QLH LE IRR+L RVEA+HAVSWLW SD S+I RAA Sbjct: 227 AAQFKNLNIMVILTNAGVVD-TGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYR------PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGP-ASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAA 393
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 119 bits (297), Expect = 3.380e-26 Identity = 80/177 (45.20%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 2 MAAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHL--EKASCMRAYVNSRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRAA 526 +AA + + +A+L AG +D +G+AL A+ EAS K L+Q L EK A +N R G TAL ++ + +PR+VRLL++AGAD S +R T ++G V + TPLALTT L EK +D NGE TE+ L LE IRR+L R EA+HAVSWLW SD S + AA Sbjct: 209 LAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSIQRCLSQ---TPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKI-LD-NGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAA 376
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 118 bits (296), Expect = 7.750e-26 Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 2 MAAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRAYVNSRDDHGQTALWCVLRFVRTSGLPS-PRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDT 505 MA E + +A MA+L AGV+D TG AL ++ GREASVK+LLQ H + AYVN RD +G T L + S PRV RLLV+AGAD + +R T + G VL S TPL LT LQ+K +G +++ +L LEGIRR+L +VEA+HA SWLW S + Sbjct: 209 MAGEGRRVAAMALLTHAGVVD-TGQALTISAGLGREASVKYLLQNHAKHYG-PGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKK---VDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSS 372
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.570e-25 Identity = 83/211 (39.34%), Postives = 110/211 (52.13%), Query Frame = 2 Query: 20 HIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRAYVN-SRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLA-LTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLATLFRHSQK 646 + +M++LMDAGV+DP G AL A G+EA+V FLL+Q E+ +YVN +RDD G TAL R + +PR+ R LVDAGAD S V+L R ++ TPL + L+E NG T++QL LE RRVL RV A+HAVSW+W SD + R A +L TLFR+S+K Sbjct: 202 QVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEER--WQTSYVNIARDDDGLTALLWSFRGNKNKPC-NPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNG----DHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 115 bits (289), Expect = 8.040e-25 Identity = 89/220 (40.45%), Postives = 118/220 (53.64%), Query Frame = 2 Query: 5 AAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRAYVN-SRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGR-VLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQS-DTSSIVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VLLATLFRHSQK 646 AA+ +H+ MAVL+DAG + TG AL A+ GR +VKFLL++ A AYVN +RD +G+T + C + V L SP++VRLLVDAGA+ V +T R S TPLA TT L+E +GE T++QL L+ R +LSR EA+HAVSWLW S + I +AA VLL TLFR+S+K Sbjct: 223 AADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD---AYVNGTRDPYGRTPVMCAVD-VGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGR---VDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.030e-21 Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 2 MAAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRAYVNSR-DDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRA 523 +AA Q++ +M +L GV+D TG AL A+ RE SVKFLLQ +A YVN+ D G+T L C + G SPR+ R L+D GAD S V +T + TPL T L++ G++ TE+QL L+ I R+LS++EA+HAVSWLW+S + I A Sbjct: 220 LAATEQYVDIMGILTVGGVVD-TGRALVVAAEYSREESVKFLLQH---QAGGGTWYVNNTLDPFGRTPLVCT---IEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNK---VGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHA 384
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 106 bits (264), Expect = 2.600e-21 Identity = 78/176 (44.32%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 2 MAAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRAYVNSRDDHGQ-TALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRAA 526 +AA +QH+++M L DAGV+D TG AL + G EA VKFLLQQ AYVN+R + + T L F+ G SPRVVR+L+DAGAD S L +SR+PL+ ++ K C TE+QL+GL+ IRR+L RVEAI+A SWLW S+ I AA Sbjct: 278 LAAWVQHMSIMTALTDAGVVD-TGTALFNVAAKGLEAPVKFLLQQKWNTPG--GAYVNTRSRNAKFTPL-----FIAIEGA-SPRVVRMLLDAGADVTSTCSLPGG-----ISRSPLSQCESNIRSKF---CQALPATEEQLNGLQAIRRLLLRVEAIYASSWLWCSNIPCIAPAA 436
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 104 bits (259), Expect = 9.760e-21 Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 5 AAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKASCMRA-YVNSRDDHGQTALWCVLRFVRTSGLPSPRVVRLLVDAGADALSPVRLTEADGRVLLSRTPLALTTMKLQEKNGMDCNGEDVTEDQLHGLEGIRRVLSRVEAIHAVSWLWQSDTSSIVRA 523 AA + +MA+L DAGV+D TG AL A+ G EA +KFLL+Q + S RA Y+N+ + G T+L ++ R PRVV+LLV+AGAD SPV + G TPL LT L ++ + +T ++ + LE IRR+L R EA+HAVSWLW SDT +I A Sbjct: 227 AALFSRLDIMAILTDAGVVD-TGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCR------PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSA-----KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHA 388 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig145.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig145.3303.1 >prot_L-elsbetiae_contig145.3303.1 ID=prot_L-elsbetiae_contig145.3303.1|Name=mRNA_L-elsbetiae_contig145.3303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp MAAEMQHIAVMAVLMDAGVLDPTGAALRTASRGGREASVKFLLQQHLEKAback to top mRNA from alignment at L-elsbetiae_contig145:41070..43514- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig145.3303.1 ID=mRNA_L-elsbetiae_contig145.3303.1|Name=mRNA_L-elsbetiae_contig145.3303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2445bp|location=Sequence derived from alignment at L-elsbetiae_contig145:41070..43514- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig145:41070..43514- >mRNA_L-elsbetiae_contig145.3303.1 ID=mRNA_L-elsbetiae_contig145.3303.1|Name=mRNA_L-elsbetiae_contig145.3303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig145:41070..43514- (Laminarionema elsbetiae ELsaHSoW15)back to top |