mRNA_L-elsbetiae_contig1435.3217.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A6H5L9L6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9L6_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 6.010e-139 Identity = 243/407 (59.71%), Postives = 281/407 (69.04%), Query Frame = 1 Query: 1 RASSTRMGSNSMSDEQHKRWKHVYRDFILQVHPDFFQDSPEERAVNEKSLKTFSQHLERL-----QLGHVKS-----TGSSSPLVFFVKQVGGSSHEEENDGGEMRLDSDAETVPSPQKFLLPLEAHHEMATHLLKAGITSVPPLPPQPPRRQADRASAHPPKSTSRPADGSN-DNNSGWHSWGEEWFGGTAANRAWDEAXXXXXXXXXXXXXXXGRRSAFGSVQDNTREGRQRTTEWGAAFERVSGDGDDSTSRLGRVLATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCRAHRETLNVPDFGGLEVVFRNDPSALDKGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCSKTR 1188 R S++ + S EQH+ WK VYR F+L VHPDFF +SP++RAVNEKSLK+ SQHL+RL + G V S GS+SPLVFF+KQ G ++DG PS K +LPL +HH+MATHL +G++ V PP A++AS S SRP D SN DN S WH W ++ FGGTAANRAWDEA RSAF S D TREGRQRTTEWGAAFER SG S LG++L+TD GRALVRERR SR+V +LV +LREQYGFGEFTFRCGWSKSNLCVALGSL+ETCRA R V DFGGLEVVFRNDPS L KGEIRLCP+DVP QWV+ L+RVTPAVLS A E SR+MISLQERAS AL+GA LSRGLSCSK+R Sbjct: 39 RLSTSTHSGRTTSPEQHQEWKSVYRAFLLHVHPDFFHESPKKRAVNEKSLKSLSQHLDRLGGEDTRSGGVHSRSNAANGSASPLVFFLKQAGDEGAGSKSDGS-----------PSRGKVMLPLGSHHQMATHLYDSGMSGV-----SPPPAHAEQASTRRHHS-SRPVDSSNNDNPSRWHGWEDDLFGGTAANRAWDEAAAGRNGSRDTHG-----RSAFSSDDDKTREGRQRTTEWGAAFERRSGH----ASWLGQILSTDEGRALVRERRSSSRKVRRLVGELREQYGFGEFTFRCGWSKSNLCVALGSLVETCRARRGEFLVNDFGGLEVVFRNDPSVLHKGEIRLCPSDVPNQWVSALRRVTPAVLSAAEEQSREMISLQERASRALRGARLSRGLSCSKSR 419
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A662YBB6_9STRA (DUF4461 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBB6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.840e-8 Identity = 45/154 (29.22%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 745 LATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWS----KSNLCVALGSLLETCRAHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 + D A ++R++ + + + L+ + G + CGWS +++ V L L + RAH++ + P DF G + ++PS +D + I L PADVP QWV VL+ + ++ + + + +LQ A++AL AH++RG +CS Sbjct: 250 MRADDTMATQKQRQIAWQSIQSVKRTLKRELGVEDVLTSCGWSTMHLNTSIMVLLHILRQYTRAHKQGIFTPKDFLRGATIDISSNPSGIDFANEYRIGLNPADVPLQWVEVLETIDADMVVFMKAARESLEALQSNATAALGEAHITRGFTCS 403
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A662X3P7_9STRA (DUF4461 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3P7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.150e-8 Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 745 LATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWS----KSNLCVALGSLLETCRAHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 + D A ++R++ + + + L+ + G + CGWS +++ V L L + RAH++ + P DF G + ++PS +D + I L PADVP QWV VL+ + ++ + + + LQ A++AL AH++RG +CS Sbjct: 254 MRADDTMATQKQRQIAWQSIQSVKRTLKRELGIEDVLTSCGWSTMHLNTSIMVLLHILRQYTRAHKQGIFTPKDFLRGATIDISSNPSGIDFANEYRIGLNPADVPLQWVEVLETIDADMVVFMKAARESLEVLQSNATAALGEAHITRGFTCS 407
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A2P4X8H3_9STRA (Mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8H3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.110e-8 Identity = 48/162 (29.63%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 721 STSRLGRVLATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCR----AHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 S L + D + + R++ + + + L+ + G + F CGWS +L + LL+T R A+++ + P DF G + +PS +D + I L PADVP QWV VL+ + ++ + + + SLQ A++AL A++SRG +CS Sbjct: 163 SLKELLEFMKEDETMEIQKRRQIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTIMILLQTLRKYTRANKQGIFAPKDFLRGATIDISANPSGIDFSNEYRIGLNPADVPVQWVQVLETIDANMVLFMKAARESLASLQTDATAALGHANISRGHTCS 324
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A329SB38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SB38_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.330e-8 Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 781 RRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLET----CRAHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 RR+ + + + L+ + G + + CGWS +L LL+T RA+++ + P DF G + +PS +D + I L PADVP QWV VL+ + ++ + + +ISLQ A++AL A++SRG +CS Sbjct: 210 RRIAWQSIQSVRGTLKRELGLEDMLYSCGWSTMHLNTTAMILLQTLRKYARANKQGIFSPKDFLRGATIDISANPSGIDFSNEYRIELNPADVPVQWVQVLETIDANMVLFMKAARESLISLQTDATAALGEANISRGHTCS 351
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: W2RD74_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RD74_PHYPN) HSP 1 Score: 65.1 bits (157), Expect = 9.410e-8 Identity = 91/391 (23.27%), Postives = 157/391 (40.15%), Query Frame = 1 Query: 73 RDFILQVHPDFFQDSPEERAVNEKSLKTFSQHLERLQLGHVKSTGSSSPL-----------VFFVKQVGGSSHEEENDGGEMRLDSDAETVPSPQKFLLPLEAHHE--MATHLLKAGITSVPPLPPQPPRRQADRASAHPPKSTSRPADGSNDNNSGWHSWGEEWFGGTAANRAWDEAXXXXXXXXXXXXXXXGRRSAFGSVQDNTREGRQRTTEWGAAFERVSGDGDDSTSRLGRVLATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCR----AHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 + F+L+VHPD F++ P+ N S+K +Q ++ H S G L V+F V ++ E + + ++F L L A+ E M + L + G++ A + + RP D + SGW S FGG + + +A R+A S ++ + + G L + D + + RR+ + + + L+ + G + F CGWS +L LL+T R A+++ + P DF G + +PS +D + I L PADVP QW+ VL+ + ++ + + + SLQ A++AL A++SRG +CS Sbjct: 9 KQFLLRVHPDHFRNIPKVHDENLHSVKLLNQFMDE----HYASHGGGGSLSWRRLAAPKEKVYFSVMV-----------PSLKAQESGEEIKTLKRFPLELAANIEAKMISVLRECGVSVDQNTEEAAVSGTASQHRRVKKRGERRPDDWRRSHESGWKSPSGMDFGGFTMDEMYAKAN----------------RAAAASASRRRKK----------PIQTLKG--------LLEYMKEDETVEIQQRRRIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLHGATIDISANPSGIDFSNEYRIVLNPADVPVQWIQVLETIDANMVLFMKAARESLKSLQTDATAALGEANISRGHTCS 350
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A0W8C9T8_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C9T8_PHYNI) HSP 1 Score: 65.1 bits (157), Expect = 1.190e-7 Identity = 91/391 (23.27%), Postives = 157/391 (40.15%), Query Frame = 1 Query: 73 RDFILQVHPDFFQDSPEERAVNEKSLKTFSQHLERLQLGHVKSTGSSSPL-----------VFFVKQVGGSSHEEENDGGEMRLDSDAETVPSPQKFLLPLEAHHE--MATHLLKAGITSVPPLPPQPPRRQADRASAHPPKSTSRPADGSNDNNSGWHSWGEEWFGGTAANRAWDEAXXXXXXXXXXXXXXXGRRSAFGSVQDNTREGRQRTTEWGAAFERVSGDGDDSTSRLGRVLATDAGRALVRERRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCR----AHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 + F+L+VHPD F++ P+ N S+K +Q ++ H S G L V+F V ++ E + + ++F L L A+ E M + L + G++ A + + RP D + SGW S FGG + + +A R+A S ++ + + G L + D + + RR+ + + + L+ + G + F CGWS +L LL+T R A+++ + P DF G + +PS +D + I L PADVP QW+ VL+ + ++ + + + SLQ A++AL A++SRG +CS Sbjct: 9 KQFLLRVHPDHFRNIPKVHDENLHSVKLLNQFMDE----HYASHGGGGSLSWRRLAAPKEKVYFSVMV-----------PSLKAQESGEEIKTLKRFPLELAANIEAKMISVLRECGVSVDQNTEEAAVSGTASQHRRVKKRGERRPDDWRRSHESGWKSPSGMDFGGFTMDEMYAKAN----------------RAAAASASRRRKK----------PIQTLKG--------LLEYMKEDETVEIQQRRRIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLHGATIDISANPSGIDFSNEYRIVLNPADVPVQWIQVLETIDANMVLFMKAARESLKSLQTDATAALGEANISRGHTCS 350
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A6A3SEK8_9STRA (DUF4461 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3SEK8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.240e-7 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 781 RRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCR----AHRETLNVP-DF-GGLEVVFRNDPSALDKGE---IRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 RR+ + + + L+ + G + F CGWS +L LL+T R A+++ + P DF G + +PS +D I L PADVP QWV VL+ + ++ + + + +LQ A+SAL A++SRG +CS Sbjct: 155 RRIAWESIQSVRNTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLRGATIDLSANPSGIDFSNAYRIGLNPADVPVQWVQVLETIDADMVVFMKATRESLATLQADATSALGEANISRGHTCS 296
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A8J5M8W6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M8W6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.600e-7 Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 781 RRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLET----CRAHRETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGL 1170 RR+ + + + L+ + G + + CGWS +L LL+T RA+++ + P DF G + +PS +D + I L PADVP QWV VL+ + ++ + + +ISLQ A++AL A++SRGL Sbjct: 210 RRIAWQSIQSVRGTLKRELGLEDMLYSCGWSTMHLNTTAMILLQTLRKYARANKQGIFSPKDFLRGATIDISANPSGIDFSNEYRIELNPADVPVQWVQVLETIDANMVLFMKAARESLISLQTDATAALGEANISRGL 348
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Match: A0A6A3KLI4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KLI4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.870e-7 Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 781 RRLGSRRVCQLVDDLREQYGFGEFTFRCGWSKSNLCVALGSLLETCRAH----RETLNVP-DF-GGLEVVFRNDPSALD---KGEIRLCPADVPYQWVAVLQRVTPAVLSRARESSRDMISLQERASSALQGAHLSRGLSCS 1179 RR+ + + + L+ + G + F CGWS +L LL+T R + ++ + P DF G + +PS +D + I L PADVP QWV VL+ + ++ + + + +LQ A+SAL A++SRG +CS Sbjct: 203 RRIAWESIQSVRNTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRMNKQGIFTPKDFLRGATIDLSANPSGIDFSNEYRIGLNPADVPVQWVQVLETIDADMVVFMKATRESLATLQADATSALGEANISRGHTCS 344 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1435.3217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1435.3217.1 >prot_L-elsbetiae_contig1435.3217.1 ID=prot_L-elsbetiae_contig1435.3217.1|Name=mRNA_L-elsbetiae_contig1435.3217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp MGSNSMSDEQHKRWKHVYRDFILQVHPDFFQDSPEERAVNEKSLKTFSQHback to top mRNA from alignment at L-elsbetiae_contig1435:23576..25898+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1435.3217.1 ID=mRNA_L-elsbetiae_contig1435.3217.1|Name=mRNA_L-elsbetiae_contig1435.3217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2323bp|location=Sequence derived from alignment at L-elsbetiae_contig1435:23576..25898+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1435:23576..25898+ >mRNA_L-elsbetiae_contig1435.3217.1 ID=mRNA_L-elsbetiae_contig1435.3217.1|Name=mRNA_L-elsbetiae_contig1435.3217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2346bp|location=Sequence derived from alignment at L-elsbetiae_contig1435:23576..25898+ (Laminarionema elsbetiae ELsaHSoW15)back to top |