mRNA_L-elsbetiae_contig1434.3206.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1434.3206.1
Unique NamemRNA_L-elsbetiae_contig1434.3206.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: D8LKH9_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH9_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.430e-115
Identity = 188/253 (74.31%), Postives = 205/253 (81.03%), Query Frame = 1 
Query:  184 MSAAGDGQSSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTLGKGAAGXXXXXXXXXXXXXXXXXXXXLVASLVGVAA-----VVVGIARRSR 927
            MS+AG  +SSVLS+T+LDTP++RWV LRKILWQDP+GN R WECAFR TRKSECDGVAVIVF+ YPVS KE+EILLISQYRPPVASEV+ESPAGLVDAGEDAK AAERELLEETGFSGKV SVSPIVPCDPGMT+ NMRFVTIEV+GDSEENQNPKARPEDGEFITLRRLPA SMQEGL+ F  +G QVDARLYAMAVGYTLG+ AA                     + +SLVGV       VVVG ARR R
Sbjct:    1 MSSAG--RSSVLSTTNLDTPDFRWVSLRKILWQDPKGNNRVWECAFRNTRKSECDGVAVIVFVSYPVSKKEDEILLISQYRPPVASEVIESPAGLVDAGEDAKEAAERELLEETGFSGKVTSVSPIVPCDPGMTDANMRFVTIEVNGDSEENQNPKARPEDGEFITLRRLPATSMQEGLDEFANAGFQVDARLYAMAVGYTLGRRAAAAGEGVCPRRWLGCA------VASSLVGVVVAATLMVVVGGARRGR 245
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A507BWH5_9FUNG (Nudix hydrolase domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BWH5_9FUNG)

HSP 1 Score: 179 bits (455), Expect = 1.550e-49
Identity = 90/194 (46.39%), Postives = 124/194 (63.92%), Query Frame = 1 
Query:  208 SSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTL 789
            + ++S   +   + +WV+L+KI + DP G  R WE A R +RK + D V ++  +K P  NK  E +L++Q+RPPV ++ VE PAGLVD GE A+ AA REL EETGF GK +  S I+  DPGM+N NM+FVT+EVD    EN +PKA P++GEFI +  +P   +   L+ F   G +VDARLY  A G  L
Sbjct:    4 AKIISKEPMKDEDAKWVKLKKITYSDPAGKIRLWESAERTSRKGDIDAVGILALLKMP--NKPTETVLVTQFRPPVGAQCVEMPAGLVDKGETAEQAAVRELREETGFIGKAIRSSEIMDSDPGMSNANMKFVTVEVDRTLPENHSPKAEPDEGEFIDIHIVPLVGLLGTLKGFISKGFKVDARLYHFAEGLDL 195
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: F0XWS1_AURAN (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS1_AURAN)

HSP 1 Score: 164 bits (415), Expect = 6.450e-44
Identity = 87/182 (47.80%), Postives = 117/182 (64.29%), Query Frame = 1 
Query:  247 YRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRS-GLQVDARLYAMAVGYTL 789
            +RW+RL+K+ + D  G  R WE A R TR+   DGV ++  ++        +++L++Q+RPP+   V+E PAGLVD GE A  AA REL EETGF G V SVSP+V  DPGM+  NM+ V ++VDGD+ EN  P A PE+GEFIT+  +P A +   L A  ++ G  VDARLYA A G  L
Sbjct:   13 FRWLRLKKLAYVDQTGRRRFWEMAERTTRRGAVDGVGIVAVVRRRAC--APQVVLVTQFRPPLDGHVLELPAGLVDGGEGAGGAALRELKEETGFVGTVTSVSPVVASDPGMSAANMQLVVVDVDGDAPENLKPVAEPEEGEFITVLLVPLAGLAARLRAEMKARGYHVDARLYAYAAGLEL 192
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A2P6V3B5_9CHLO (NUDIX domain-containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3B5_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 2.510e-42
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1 
Query:  208 SSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEA-FTRSGLQVDARLYAMAVGYTLGKGAA 804
            S V+S+  +    +RW++L++I W+DP G  R WE A R TR+ E DGVA++   K     +   I ++ Q+RPPVA+  +E PAGLVDAGE A  AA REL EETG++G V  V+P+   DPGM+  NMR+VT+EVDGD+ ENQ  K   EDGEFI +   P  S+   L A    +G  VDARL + A G    K AA
Sbjct:    3 SRVVSAEPVRPDGFRWLQLKRIEWEDPHGRQRLWESADRTTRRGEVDGVAILA--KILRKGQPPLIPVLKQFRPPVAAYCLELPAGLVDAGETAAAAAVRELKEETGYTGSVCEVTPVCVSDPGMSGANMRYVTLEVDGDAPENQGVKQELEDGEFIQVELAPWGSLLHYLLAEMEATGCTVDARLLSYAWGLEHAKEAA 200
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A316W1L6_9BASI (Nudix hydrolase domain-containing protein n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A316W1L6_9BASI)

HSP 1 Score: 159 bits (403), Expect = 7.170e-42
Identity = 101/210 (48.10%), Postives = 124/210 (59.05%), Query Frame = 1 
Query:  208 SSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGED----AKVAAERELLEETGF-------SGKVVSVSPIVPCDPGMTNGNMRF--VTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTLGKG 798
            + VL S  +D  E +WV LR I W D EG  R+WE A R TRK E D VA+   I  P S  E  +LLISQ+RPPVAS V+E PAGLVDAGE+    A+ AA REL EETG+       S  VV  S I+  DPG++  NM+   V I +  DSEE   P A+PE+GEFI    +P   + + L+ F   G  VDARL  +AVG  LG G
Sbjct:    6 AKVLRSRPMDDSEAKWVGLRAIEWVDQEGRERKWESADRKTRKGEVDAVAICALIHRPSS--ETHVLLISQFRPPVASSVIEMPAGLVDAGEEGDEGAQKAALRELEEETGYGTTKQGGSVDVVETSTIMVNDPGLSGANMKLCVVRIHLSDDSEE---PVAKPEEGEFIEKHLVPVKGLYKTLKDFQDKGFAVDARLAHLAVGLELGLG 210
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A0H5C7U6_CYBJN (Nudix hydrolase domain-containing protein n=2 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A0H5C7U6_CYBJN)

HSP 1 Score: 159 bits (403), Expect = 9.880e-42
Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 1 
Query:  187 SAAGDGQSSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRK--SECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVG 780
            S      + +LS   L T + +W +L KI +QDP G AR WECA R TR   SE D VA++  I  P   +  EI+L  Q+RPP     +E PAGLVD  E  +  A REL EETG+ G V+S S ++  DPG  N N+  VT+++D + E N+NP  + EDGEFI +  +P A++ E LE   R G ++D+R+  +A G
Sbjct:   24 SKGSPSNAKILSIEPLPTQDAKWTKLEKITYQDPAGKARLWECASRTTRPEGSEVDAVAIVAIIDKP---EGPEIVLEKQFRPPTCGVCIEMPAGLVDPNESVETTAIRELKEETGYHGTVLSKSMVIYTDPGFCNTNLNLVTVKIDLEDERNKNPVPQLEDGEFIEIFTVPMATLSEQLEQLHREGYKIDSRVQNVATG 220
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A316VDH4_9BASI (Nudix hydrolase domain-containing protein n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VDH4_9BASI)

HSP 1 Score: 159 bits (401), Expect = 1.270e-41
Identity = 94/211 (44.55%), Postives = 123/211 (58.29%), Query Frame = 1 
Query:  208 SSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKV----AAERELLEETGFS-----GK--VVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTLGKGAAG 807
            S VL S  L   + +WV LR I WQDP G  R+WECA R TRK + D VA+   ++ P S  E  +LL+SQ+RPPV S V+E PAGL+DAGE+ +     AA REL EETG+      GK  V  VS ++  DPGMT+ NM+   I +D  +++   P A P++GEFI    +P   +   L  F + G  VDARL   A+G  LG G  G
Sbjct:    2 SKVLRSEPLSDADAKWVGLRAIYWQDPTGKERKWECADRRTRKGDADAVAICAIVQRPSS--EPHMLLVSQFRPPVNSSVIEMPAGLIDAGEEGEEGTRRAALRELKEETGYGTDKEGGKIDVKLVSTVMANDPGMTSSNMKLCVIRIDL-ADDAPEPVAEPDEGEFIERHLVPVHGLMNALLDFQKKGFAVDARLAHAAIGIELGLGRLG 209
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A4Q9QG04_9APHY (NUDIX hydrolase domain-like protein n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9QG04_9APHY)

HSP 1 Score: 158 bits (399), Expect = 1.940e-41
Identity = 88/197 (44.67%), Postives = 121/197 (61.42%), Query Frame = 1 
Query:  205 QSSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRPTRKSE-CDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGF-SGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTL 789
            +S VLS  DL T E +WV+L+K  W+DP+G  R WE A RPTR S   D VA++  ++   +      ++I Q+RPPV   VVE PAGL+D GE A+ AA REL EETGF +  V+  SP++ CDPGMTN NM+ VT++V    E+ + P  + E GE+IT R +  + +    +  +  G  VDARL  MA G+ L
Sbjct:    3 ESKVLSVEDLQTSEAKWVKLKKCTWRDPDGKERPWEFATRPTRGSGGVDAVAILAILRSESNAFPPSTIIIEQFRPPVERYVVELPAGLIDEGESAEGAAIRELEEETGFKASSVIQTSPLLVCDPGMTNANMKLVTVDVPF-PEKLEMPAQKLEPGEYITARIVELSKLAAEFKGLSSIGFVVDARLSHMASGFEL 198
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: A0A813DFW4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DFW4_POLGL)

HSP 1 Score: 159 bits (401), Expect = 3.010e-41
Identity = 86/197 (43.65%), Postives = 119/197 (60.41%), Query Frame = 1 
Query:  205 QSSVLSSTDLDTPEYRWVRLRKILWQDPEGNAREWECAFRP----TRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGF-SGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVG 780
            ++ V+SS     P +RW++LR + + D  G  R+WE A R     T  S  DGV V+  I YPVS    E+LLI Q+RPP+  +V+E  AGLVD GE  +VAA REL EETGF  G +  V+  +P DPGM+N  +  V +++DGD  EN+ P A PEDGE IT+ R+P +S+++ L      G  VD  ++A   G
Sbjct:    4 KAQVVSSETFKPPNFRWMQLRLLTYVDVTGRTRKWEMAERSHANKTEGSAVDGVFVVATIHYPVSRLPPELLLIKQFRPPMNKDVIEFVAGLVDKGETPEVAALRELKEETGFVKGSIRGVTSPMPMDPGMSNSQVAMVLVDIDGDDAENRKPIASPEDGEHITVFRVPFSSLEKNLHELEGLGCAVDIAVWAFVYG 200
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BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Match: Q6CVU6_KLULA (KLLA0B09306p n=2 Tax=Kluyveromyces lactis TaxID=28985 RepID=Q6CVU6_KLULA)

HSP 1 Score: 158 bits (399), Expect = 3.100e-41
Identity = 86/196 (43.88%), Postives = 121/196 (61.73%), Query Frame = 1 
Query:  208 SSVLSSTDL-DTPEYRWVRLRKILWQDPEGNAREWECAFRPTR-KSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVVESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMRFVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQVDARLYAMAVGYTL 789
            + +LSS  + DT + +W+ LRK+ +QDP G  REW+ A R TR +   DGV ++  ++Y  S+K +EILL  Q+RPPV    +E PAGL+D GE  + AA REL EETG+ GK++  +PI+  DPG TN N+  VT  VD    ENQNP +  E+ EFI    +P ASM + +      G ++DAR+  +A G  L
Sbjct:   24 AKLLSSKPVSDTSDCKWIGLRKLTYQDPNGKVREWDSAVRLTRSEGGVDGVGILAILRY--SDKPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIETAALRELKEETGYVGKILHATPIIFNDPGFTNTNLSLVTAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEMAKLAEQGYKLDARVQNVAQGIKL 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1434.3206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH9_ECTSI1.430e-11574.31Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A507BWH5_9FUNG1.550e-4946.39Nudix hydrolase domain-containing protein n=1 Tax=... [more]
F0XWS1_AURAN6.450e-4447.80Nudix hydrolase domain-containing protein (Fragmen... [more]
A0A2P6V3B5_9CHLO2.510e-4247.00NUDIX domain-containing n=1 Tax=Micractinium condu... [more]
A0A316W1L6_9BASI7.170e-4248.10Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A0H5C7U6_CYBJN9.880e-4242.50Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A316VDH4_9BASI1.270e-4144.55Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A4Q9QG04_9APHY1.940e-4144.67NUDIX hydrolase domain-like protein n=3 Tax=Dichom... [more]
A0A813DFW4_POLGL3.010e-4143.65Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
Q6CVU6_KLULA3.100e-4143.88KLLA0B09306p n=2 Tax=Kluyveromyces lactis TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1434contigL-elsbetiae_contig1434:3907..8320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.8
Seed ortholog evalue1.6e-94
Seed eggNOG ortholog2880.D8LKH9
Preferred namendx-2
KEGG rclassRC00002,RC00004,RC00010,RC00039,RC02725,RC02798
KEGG koko:K00652,ko:K01515,ko:K01915,ko:K13987,ko:K14400
KEGG ReactionR00253,R01054,R03210,R10124,R11553
KEGG Pathwayko00220,ko00230,ko00250,ko00630,ko00780,ko00910,ko01100,ko01120,ko01230,ko02020,ko03015,ko04217,ko04724,ko04727,map00220,map00230,map00250,map00630,map00780,map00910,map01100,map01120,map01230,map02020,map03015,map04217,map04724,map04727
KEGG ModuleM00123,M00573,M00577
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009132,GO:0009134,GO:0009185,GO:0009191,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047631,GO:0055086,GO:0071704,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.ADP-glucose pyrophosphohydrolase activity
EggNOG OGsCOG0494@1,KOG3041@2759
EC2.3.1.47,2.7.7.96,3.6.1.13,3.6.1.58,6.3.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03019,ko03021,ko04147
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-16_003020.1
Exons5
Model size1727
Cds size933
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1434.3206.1prot_L-elsbetiae_contig1434.3206.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1434 4701..8320 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.9519198-UTR-L-elsbetiae_contig1434:3906..47001622815572.9519198-UTR-L-elsbetiae_contig1434:3906..4700Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1434 3907..4700 -
1691682967.371419-UTR-L-elsbetiae_contig1434:3906..47001691682967.371419-UTR-L-elsbetiae_contig1434:3906..4700Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1434 3907..4700 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.9656384-CDS-L-elsbetiae_contig1434:4700..49651622815572.9656384-CDS-L-elsbetiae_contig1434:4700..4965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 4701..4965 -
1691682967.3837888-CDS-L-elsbetiae_contig1434:4700..49651691682967.3837888-CDS-L-elsbetiae_contig1434:4700..4965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 4701..4965 -
1622815572.976011-CDS-L-elsbetiae_contig1434:5274..53431622815572.976011-CDS-L-elsbetiae_contig1434:5274..5343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 5275..5343 -
1691682967.3923151-CDS-L-elsbetiae_contig1434:5274..53431691682967.3923151-CDS-L-elsbetiae_contig1434:5274..5343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 5275..5343 -
1622815572.991572-CDS-L-elsbetiae_contig1434:6012..61671622815572.991572-CDS-L-elsbetiae_contig1434:6012..6167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 6013..6167 -
1691682967.402965-CDS-L-elsbetiae_contig1434:6012..61671691682967.402965-CDS-L-elsbetiae_contig1434:6012..6167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 6013..6167 -
1622815573.0050569-CDS-L-elsbetiae_contig1434:6865..70271622815573.0050569-CDS-L-elsbetiae_contig1434:6865..7027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 6866..7027 -
1691682967.411684-CDS-L-elsbetiae_contig1434:6865..70271691682967.411684-CDS-L-elsbetiae_contig1434:6865..7027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 6866..7027 -
1622815573.0172105-CDS-L-elsbetiae_contig1434:8038..83201622815573.0172105-CDS-L-elsbetiae_contig1434:8038..8320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 8039..8320 -
1691682967.4195685-CDS-L-elsbetiae_contig1434:8038..83201691682967.4195685-CDS-L-elsbetiae_contig1434:8038..8320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1434 8039..8320 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1434.3206.1

>prot_L-elsbetiae_contig1434.3206.1 ID=prot_L-elsbetiae_contig1434.3206.1|Name=mRNA_L-elsbetiae_contig1434.3206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp
SPCSVSASVSLSFPVSICSIHTAHSRPHRVPVFSPASDQHTQLCVCRSAA
GFKKKNRRTRRMSAAGDGQSSVLSSTDLDTPEYRWVRLRKILWQDPEGNA
REWECAFRPTRKSECDGVAVIVFIKYPVSNKEEEILLISQYRPPVASEVV
ESPAGLVDAGEDAKVAAERELLEETGFSGKVVSVSPIVPCDPGMTNGNMR
FVTIEVDGDSEENQNPKARPEDGEFITLRRLPAASMQEGLEAFTRSGLQV
DARLYAMAVGYTLGKGAAGGGGGDHKERSNCRRWWGGGALVASLVGVAAV
VVGIARRSRA*
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mRNA from alignment at L-elsbetiae_contig1434:3907..8320-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1434.3206.1 ID=mRNA_L-elsbetiae_contig1434.3206.1|Name=mRNA_L-elsbetiae_contig1434.3206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4414bp|location=Sequence derived from alignment at L-elsbetiae_contig1434:3907..8320- (Laminarionema elsbetiae ELsaHSoW15)
TCTCCTTGTTCTGTCTCTGCTTCTGTCTCTCTCTCTTTCCCAGTCTCCAT
CTGCAGCATCCACACAGCGCACTCCAGACCGCACCGTGTGCCTGTCTTCT
CGCCCGCCAGTGATCAGCACACGCAGCTTTGCGTTTGCCGTTCAGCAGCA
GGATTCAAAAAGAAGAACCGCAGAACCAGGAGGATGTCTGCAGCTGGCGA
TGGCCAGTCTTCTGTCTTGTCTTCGACCGACCTGGACACCCCGGAGTACC
GATGGGTTAGACTGAGGAAGATACTGTGGCAGGTGCGTCGGCCCTGGGTG
TATATCCACGGCCTAGGACCAGAAGATGTACATGCAAAAAGAGCCGGCGC
GACCCAAACTGCGGCCTAAATACCGGGAAAGTTGTTAGCGTTGGAAGTAC
AGGGGTATAGCTCGGGTTAGGGCCGCGGGAAAGGCAGGGTGGCAGCAGCA
GCGTATAGTGCTACCGCAGCTAGCACACCATTTGCGCAAGATCTTGCCTG
GCTCTCGCGCTGTATGGTGTATCTAGAAACGTCTCGAACAGAAAACGCAC
GCACCATCAAATAAAATGCCTGTCTTCAAAACATATTTGCCGTGAGAGAA
GCGATGTCTGTTCCAGGAAAAGATAGTGGTATCCGCGGGTAGCAGCGCTT
CCGGATGTTGCAAGGGCAAGAGAGTGGGCTTTGCTGTATCCAGATCTATC
TATAACCCAGTCGTTTTATGTACGTATTTACGTTAAACGTGCTGCATAAC
TTGGAGAGCCCTCGCAACCGCACGTCAGCGAAAGGACGAAAGGGGAAGTT
TGGTCGATGTTCCTTCTTTTCTGTTTCAGTGGGCGGGAAAGAGCAAAAGA
GACAGACAAGCGGAGATAGAGCATCTAAGGATGTGCGCCATGGCGTGCAA
AAGTGGAAGGTTGAAGGTTTGATCATGTATACGGATTGCTTGTAGCGACC
ATGGGTCTAACCGGGTCTATGTGTATCTGGATAGTCTATCTAGAATGCTT
ATTGTGGCCACCGACGAACTAGTGAGCACGACGTGTTCCGTCGTGATGCA
CGATCGGACGATTCTTCGTAAGTAGTGCGTATTTGGTTGGGTCTGCCACT
GTGCTGGCTGGTCGCTGTTCGTGCTTTCTGGCTTCGAATTATTTGTTATC
GTGACTAGCTATCTATATTGGACAGCAGTAGTAGTCTACATAGAAGTTAA
TCACTCACCGTAGGTACTGATGGTTGATGCCAGCGCGCGCCCCCCGTCCA
TCCACTCACATCGGAATATTATTTGACTGCAAAACGATTTCAGGACCCGG
AGGGTAATGCGAGAGAGTGGGAATGCGCTTTCCGCCCGACCAGAAAGTCG
GAGTGCGATGGCGTGGCGGTGATCGTCTTTATCAAGTACCCCGTCTCGAA
CAAGGAGGAGGAGATCCTGCTCATCTCGCAGTACAGACCGCCGGTCGCAT
CCGAGGTGCGTCCGCCCCCTGCTGCTGGTACATAGCATACTGATGTAGGG
TGGATTAGTTTGCTCTACCGTCGGGCTTAGCTCCCCTTGTATACCAACGC
AGAAGTTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTACT
GCTGCTACTGCTGCTACTGCTGCTCCTGCATTCTATTTTTTTCCGCGGAG
AATTTGTGGTTTTGTATTTGTTGCCCCCCCCCCCCCAACCACCCAACGTA
CGGTGCGCGCGCTCGCTCGCGTGTCTGTTTGCTGAATATTTCTCTCTGAG
GGAAAAGAAACAACTTTCCCGGCCTTTTGTAGATCGGCGGAGTAGTTGGG
TATTGTACGTACGCACTGTCCCTGTGTGGCGTGCATACCTCCCTCGTACC
GAGACCCTCTCAACGATCACCATACCACGCTGTATGATAACCTATCGCAT
CCCTCTCACGACCCGGCCAAGAACGGAGGAGGTCATGCCGCCGCGGTGGC
AGCAGCGCGTGTCGTGGTGGGTGGGGGGGCTGGGGGACGAGGGTTTCGCT
CTAACTTAACACCATTTTAATCGTTGCTGGTGTGGTTCGCGTTCCTGCAA
CGGAAGCCGAGCCCCACCATTTCTTGCCTGAACCAAGACTTTCTCTGCTC
CATGCTGCTGCTCCCTGCTGCTGCTGCCTGCTGTCTGTGCGCGCCGAGCG
TAGGTGGTGGAGTCGCCGGCAGGTCTGGTCGACGCAGGCGAAGACGCGAA
GGTTGCGGCCGAGCGCGAGCTGCTGGAGGAGACGGGGTTCTCGGGCAAGG
TTGTTTCCGTGTCGCCGATCGTGCCGTGCGACCCGGGCATGACGAACGGA
AACATGCGGTGCGTGCGTGTCCAGATGTGTGTGCGTGCGTGTGTTTGTGT
CCCCTTTCTTGCCATTTTTTGTGGGCTTTGCGTGTGGAGGTTGGTGTGGT
GGCGCCTGTGTGTCACCGCACTGGTGTAGTTTTGTGCGTCTGTTTTCTTT
TTAAGCTGTTGCTTCTTTCGCCTACAATAGTGCGCTGCGACGGCTTTCTA
CGGTTGCTGCGGCTGAGTGCAGGCATACGCGCGTGAGAGTATGTCGTCGC
GTCGACGCTGTCGCACAGTTATAGACCCTGGATGATGCTTCATCTTATCA
TCCACCTCACGGATATGAAAAGCAATGAAATCATTTGCCATTGCACCGTC
AACTTTTGTTGTTTTTCTCCCTCTGTCCAGTGACCGCAAGAGGCAGGAAA
CTTTTTTCATTGCTGCTGCCCGCGCTAACCCACTGCTGGTCAACGAAACA
CTTCAACCTTTGCTGCTACAGCAGTAAAACTGCGACGCAGCCACGGCAGT
GGGTGGTCAAGTCCAGCCACACAGAGAGCCCGGTACACATGTCTCGGGCG
CTGAAACTTGTGCTGTCAACCGTGTGTCCTGCACTTTATTTACCACCGCG
TACGTGCTCCGCGAGCCTATTCTCTTAGCTCCCATCGCCCTCCTCTGCTT
GTGCCTGTTCCACCTTTGTGTGATCAGGTTTGTGACTATCGAGGTAGACG
GAGATTCCGAGGAGAATCAGAACCCGAAAGCTCGCCCAGAAGACGGGTGA
GAGAGATGCGGAGACGTGCCAATTCCCGAAGGGGGAGGGAGTGTGGCCAA
CTTTGAGGATAACCAACCGCTATTGGTCTGGTCTTTATGCGGTGACGATA
TGTATGTAGTTCTCTGCTCGAACTCCATTTGTAATCGCGTTACAAGGAAG
ACGAAACCTCTGTTCCCACGGTTGGGTGAATTGGTAAGAGGAGGAGGGCG
GGTGACCCTTCGTTCTTGGTTTCGGTTGGCGTCATCAGTTACGCGCAGTT
TTCTCTCGAGACCAAACGCCCCCGTACTCTTGTTTCATCCGCTCGTTGCA
CCCAGGGAGTTCATCACGCTTCGAAGGCTGCCGGCTGCGTCAATGCAGGA
AGGGCTGGAGGCCTTCACCAGGTCAGGGCTACAGGTCGACGCCCGCCTTT
ACGCGATGGCCGTCGGCTACACGCTGGGAAAAGGCGCGGCCGGTGGCGGC
GGCGGCGACCACAAGGAACGGAGCAATTGTCGGCGGTGGTGGGGGGGGGG
CGCGTTGGTTGCGTCGCTCGTTGGTGTTGCGGCGGTCGTTGTGGGCATCG
CCAGGCGCAGCAGAGCTTGAGCAGCCCCTTGGGGGCTAACTCCCGCGGCT
TTCAATCACATTTCTACTCCGTCCTTTCATCTCAGGAACGTGACTACAAT
AACACGCTTGCTCTAGAAGTACTTTTCTGCCAACAATTAACGCGGTTAGT
TTCGGAACTACAGCAGTTGCTCCGCTTTGCTTTAGGACGATGCGAATCGA
GGGGCGGGGTAGAGCGGGGAATAGTCGAGGCACTGTTGTGAGGGCTTCTA
CCCGCTTCATGTCTTCGTTGTATTGGAAGACAGGAAGCCTACGCGTGCGT
GTCCGCAACAAAAGGCATAAACATAAACCGATAGAATGCATGGAAACTCT
ATAGACTAGATAGTCTTTGCTGATCTGTGCGCGGTGGGAAGGAAACCGGC
TTCCTGAAGTAGTTTCTTGAGATATTTTTCCGATACGAATTTTTTGCACC
TTTGTGCTGACTGATTGGCGAGGTGGCGATGTGCTTGCGACCGGGGTACG
TTTCGATGTCGGCGCGGGAGGGGCGCCGTAGAAAGGCAGCGGGCACGCGT
GTAACAGCAGGGCCGACGAAGAAGGAAGGGAATGCACGACCAGGATTCAC
CGAGCAACGCCAATACATTCCATCACCGGGTGGAGCCGCAGCTTGCTTGC
TCTTGGGCTGTGTGGTAGTAAAGTGCTGCTTGGTGATGGTGTGCCTCCCC
TCTCTCAGTTTCCAGATTGAGTCAGTCGACTGTACAGCAAGCTGGCTATA
CATATAGTTGACATTTCCTAGACAGACAGAACCGCAGACCTTTTAATTGA
CAAGTATCTTCAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1434:3907..8320-

>mRNA_L-elsbetiae_contig1434.3206.1 ID=mRNA_L-elsbetiae_contig1434.3206.1|Name=mRNA_L-elsbetiae_contig1434.3206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig1434:3907..8320- (Laminarionema elsbetiae ELsaHSoW15)
TCTCCTTGTTCTGTCTCTGCTTCTGTCTCTCTCTCTTTCCCAGTCTCCAT
CTGCAGCATCCACACAGCGCACTCCAGACCGCACCGTGTGCCTGTCTTCT
CGCCCGCCAGTGATCAGCACACGCAGCTTTGCGTTTGCCGTTCAGCAGCA
GGATTCAAAAAGAAGAACCGCAGAACCAGGAGGATGTCTGCAGCTGGCGA
TGGCCAGTCTTCTGTCTTGTCTTCGACCGACCTGGACACCCCGGAGTACC
GATGGGTTAGACTGAGGAAGATACTGTGGCAGTCTCCTTGTTCTGTCTCT
GCTTCTGTCTCTCTCTCTTTCCCAGTCTCCATCTGCAGCATCCACACAGC
GCACTCCAGACCGCACCGTGTGCCTGTCTTCTCGCCCGCCAGTGATCAGC
ACACGCAGCTTTGCGTTTGCCGTTCAGCAGCAGGATTCAAAAAGAAGAAC
CGCAGAACCAGGAGGATGTCTGCAGCTGGCGATGGCCAGTCTTCTGTCTT
GTCTTCGACCGACCTGGACACCCCGGAGTACCGATGGGTTAGACTGAGGA
AGATACTGTGGCAGGACCCGGAGGGTAATGCGAGAGAGTGGGAATGCGCT
TTCCGCCCGACCAGAAAGTCGGAGTGCGATGGCGTGGCGGTGATCGTCTT
TATCAAGTACCCCGTCTCGAACAAGGAGGAGGAGATCCTGCTCATCTCGC
AGTACAGACCGCCGGTCGCATCCGAGGACCCGGAGGGTAATGCGAGAGAG
TGGGAATGCGCTTTCCGCCCGACCAGAAAGTCGGAGTGCGATGGCGTGGC
GGTGATCGTCTTTATCAAGTACCCCGTCTCGAACAAGGAGGAGGAGATCC
TGCTCATCTCGCAGTACAGACCGCCGGTCGCATCCGAGGTGGTGGAGTCG
CCGGCAGGTCTGGTCGACGCAGGCGAAGACGCGAAGGTTGCGGCCGAGCG
CGAGCTGCTGGAGGAGACGGGGTTCTCGGGCAAGGTTGTTTCCGTGTCGC
CGATCGTGCCGTGCGACCCGGGCATGACGAACGGAAACATGCGGTGGTGG
AGTCGCCGGCAGGTCTGGTCGACGCAGGCGAAGACGCGAAGGTTGCGGCC
GAGCGCGAGCTGCTGGAGGAGACGGGGTTCTCGGGCAAGGTTGTTTCCGT
GTCGCCGATCGTGCCGTGCGACCCGGGCATGACGAACGGAAACATGCGGT
TTGTGACTATCGAGGTAGACGGAGATTCCGAGGAGAATCAGAACCCGAAA
GCTCGCCCAGAAGACGGGTTTGTGACTATCGAGGTAGACGGAGATTCCGA
GGAGAATCAGAACCCGAAAGCTCGCCCAGAAGACGGGGAGTTCATCACGC
TTCGAAGGCTGCCGGCTGCGTCAATGCAGGAAGGGCTGGAGGCCTTCACC
AGGTCAGGGCTACAGGTCGACGCCCGCCTTTACGCGATGGCCGTCGGCTA
CACGCTGGGAAAAGGCGCGGCCGGTGGCGGCGGCGGCGACCACAAGGAAC
GGAGCAATTGTCGGCGGTGGTGGGGGGGGGGCGCGTTGGTTGCGTCGCTC
GTTGGTGTTGCGGCGGTCGTTGTGGGCATCGCCAGGCGCAGCAGAGCTTG
AGGAGTTCATCACGCTTCGAAGGCTGCCGGCTGCGTCAATGCAGGAAGGG
CTGGAGGCCTTCACCAGGTCAGGGCTACAGGTCGACGCCCGCCTTTACGC
GATGGCCGTCGGCTACACGCTGGGAAAAGGCGCGGCCGGTGGCGGCGGCG
GCGACCACAAGGAACGGAGCAATTGTCGGCGGTGGTGGGGGGGGGGCGCG
TTGGTTGCGTCGCTCGTTGGTGTTGCGGCGGTCGTTGTGGGCATCGCCAG
GCGCAGCAGAGCTTGA
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