mRNA_L-elsbetiae_contig14331.3201.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14331.3201.1
Unique NamemRNA_L-elsbetiae_contig14331.3201.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 8.000e-32
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRR------LRRTLSFMLNDWEPAIHARNLILLQLFLDSR 219
            GNTPPTDLLQHVPHDA RAD+LSLGC DLRDLLYS+LLHGRR      + R LSF LNDWEPAIHARNL+LLQ+ LDSR
Sbjct:   30 GNTPPTDLLQHVPHDAERADILSLGCSDLRDLLYSVLLHGRRGVSCGPVPRQLSFTLNDWEPAIHARNLMLLQMILDSR 108          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.790e-31
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRR------LRRTLSFMLNDWEPAIHARNLILLQLFLDSR 219
            GNTPPTDLLQH+PHDA  A++LSLGCGDLRD LYS+LLHGRR      + R  SFM+NDWEPAIHARNL+LLQ+FLD+R
Sbjct:   54 GNTPPTDLLQHIPHDAQHAEILSLGCGDLRDFLYSVLLHGRRGVSCGHVPRRFSFMMNDWEPAIHARNLMLLQMFLDAR 132          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A367LAW6_9HYPO (DUF4470 domain-containing protein n=1 Tax=Ophiocordyceps polyrhachis-furcata BCC 54312 TaxID=1330021 RepID=A0A367LAW6_9HYPO)

HSP 1 Score: 67.0 bits (162), Expect = 2.910e-11
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDS 216
            GNTP  +L ++VP+D   AD+L+LGCGDLR+LLY+I   G+  RR L F L D +  I  RN +LL L L++
Sbjct:   76 GNTPAVNLTRNVPNDQD-ADILALGCGDLRNLLYTIYSQGKLPRRKLDFTLCDHDEDIIGRNFVLLTLMLEN 146          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: B8P4J7_POSPM (Predicted protein n=2 Tax=Postia placenta TaxID=104341 RepID=B8P4J7_POSPM)

HSP 1 Score: 64.3 bits (155), Expect = 2.570e-10
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDSR 219
            GNTP   L + +P + P ADVL LGCGD R +L++I    R+ RR L F   D+EPA+ ARN++LL L  D +
Sbjct:   17 GNTPAVCLTRDIPPEEP-ADVLLLGCGDPRSVLFTIFSEPRKGRRALDFTCCDFEPAVLARNVLLLTLVADKQ 88          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A137QFT6_9AGAR (MYND-type domain-containing protein n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137QFT6_9AGAR)

HSP 1 Score: 62.8 bits (151), Expect = 8.980e-10
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDS 216
            GNTPP  L  H+P +   A +L LGCGD R +LY+I +     RR +     DWEPAI ARN++LL L  D+
Sbjct:   17 GNTPPICLTDHLPPEED-ATILLLGCGDPRSILYTIAVDHGIPRRAMDITSCDWEPAIIARNILLLTLIADN 87          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A8H5GFK1_9AGAR (DUF4470 domain-containing protein n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5GFK1_9AGAR)

HSP 1 Score: 62.4 bits (150), Expect = 1.210e-9
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILL-HGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDS 216
            GNTPP  L  H+P +   A +L LGCGD R +LY++   HG R  R +     DWEPAI ARN++LL L LD+
Sbjct:   17 GNTPPICLTDHLPPEDD-ATILLLGCGDPRSILYTVAADHGTR-DRPMDITCCDWEPAIIARNVLLLSLLLDN 87          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A8H6WD23_MYCCL (MYND-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6WD23_MYCCL)

HSP 1 Score: 62.0 bits (149), Expect = 1.670e-9
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDSR 219
            GNTP + LL+ +  +   A++L LGCGD R +LYSI   G  L+R L F   D +PA+ ARN+ILL +  D+R
Sbjct:   17 GNTPASSLLRDLAPEES-ANILLLGCGDPRHILYSIFCEGPSLKRALDFTCCDIDPAVLARNVILLTMVADNR 88          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A5C3L8B6_9AGAR (MYND-type domain-containing protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3L8B6_9AGAR)

HSP 1 Score: 61.6 bits (148), Expect = 2.290e-9
Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLD 213
            GNTP   L   +P + P AD+L LGCGD+R++L++I +     +R L    ND EPAI  RNL+L  + LD
Sbjct:   17 GNTPAAHLTAALPPETP-ADILLLGCGDVRNVLFTIYMESASSQRKLDITCNDHEPAILTRNLLLYTMLLD 86          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: D8Q6U3_SCHCM (DUF4470 domain-containing protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8Q6U3_SCHCM)

HSP 1 Score: 61.2 bits (147), Expect = 3.130e-9
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQLFLDSR 219
            GNT    L + +  + P A +L LGCGD R++LY++    R  RRTL F  ND +PAI ARN++LL +  D +
Sbjct:   17 GNTSAVSLTRDLAPETP-AIILHLGCGDPRNVLYTVFSEARTARRTLDFTCNDSDPAILARNIVLLTMIADGQ 88          
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Match: A0A8H6ZNK2_PLEOS (MYND-type domain-containing protein n=1 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A8H6ZNK2_PLEOS)

HSP 1 Score: 61.2 bits (147), Expect = 3.130e-9
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFMLNDWEPAIHARNLILLQL 204
            GNTPPT L ++   DA + ++L +GCGD R++L+++L      +R+L F   D EPA+ ARN+ILL L
Sbjct:   18 GNTPPTCLTEYTSCDASQVNILLMGCGDPRNILFTLLHDFAARQRSLDFTCCDVEPAVLARNVILLTL 85          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14331.3201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNQ8_ECTSI8.000e-3278.48MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI3.790e-3173.42MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A367LAW6_9HYPO2.910e-1150.00DUF4470 domain-containing protein n=1 Tax=Ophiocor... [more]
B8P4J7_POSPM2.570e-1047.95Predicted protein n=2 Tax=Postia placenta TaxID=10... [more]
A0A137QFT6_9AGAR8.980e-1047.22MYND-type domain-containing protein n=1 Tax=Leucoa... [more]
A0A8H5GFK1_9AGAR1.210e-949.32DUF4470 domain-containing protein n=1 Tax=Leucoaga... [more]
A0A8H6WD23_MYCCL1.670e-946.58MYND-type domain-containing protein n=1 Tax=Mycena... [more]
A0A5C3L8B6_9AGAR2.290e-945.07MYND-type domain-containing protein n=1 Tax=Coprin... [more]
D8Q6U3_SCHCM3.130e-943.84DUF4470 domain-containing protein n=1 Tax=Schizoph... [more]
A0A8H6ZNK2_PLEOS3.130e-945.59MYND-type domain-containing protein n=1 Tax=Pleuro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14331contigL-elsbetiae_contig14331:897..1115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score64.3
Seed ortholog evalue2.7e-08
Seed eggNOG ortholog5341.XP_007328829.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Domain of unknown function (DUF4470)
EggNOG OGs228UR@155619,2BWBX@1,2SE9H@2759,39W4I@33154,3P092@4751,3V4H9@5204,3W8KA@5338
COG Functional cat.S
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
Exons1
Model size219
Cds size219
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.675266-CDS-L-elsbetiae_contig14331:896..11151622815572.675266-CDS-L-elsbetiae_contig14331:896..1115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14331 897..1115 +
1691682967.2384844-CDS-L-elsbetiae_contig14331:896..11151691682967.2384844-CDS-L-elsbetiae_contig14331:896..1115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14331 897..1115 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14331.3201.1prot_L-elsbetiae_contig14331.3201.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14331 897..1115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14331.3201.1

>prot_L-elsbetiae_contig14331.3201.1 ID=prot_L-elsbetiae_contig14331.3201.1|Name=mRNA_L-elsbetiae_contig14331.3201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp
GNTPPTDLLQHVPHDAPRADVLSLGCGDLRDLLYSILLHGRRLRRTLSFM
LNDWEPAIHARNLILLQLFLDSR
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mRNA from alignment at L-elsbetiae_contig14331:897..1115+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14331.3201.1 ID=mRNA_L-elsbetiae_contig14331.3201.1|Name=mRNA_L-elsbetiae_contig14331.3201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=219bp|location=Sequence derived from alignment at L-elsbetiae_contig14331:897..1115+ (Laminarionema elsbetiae ELsaHSoW15)
GGTAACACTCCCCCGACAGACCTCCTCCAACACGTACCGCACGACGCACC GCGTGCTGACGTGCTCAGCCTCGGCTGCGGCGATCTTCGAGACCTCCTGT ACTCTATACTTCTGCACGGAAGGCGGCTGCGGCGGACGCTATCGTTCATG CTCAACGATTGGGAACCCGCCATTCACGCGAGGAACCTGATTCTCCTGCA GCTGTTCCTCGACTCTCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14331:897..1115+

>mRNA_L-elsbetiae_contig14331.3201.1 ID=mRNA_L-elsbetiae_contig14331.3201.1|Name=mRNA_L-elsbetiae_contig14331.3201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=438bp|location=Sequence derived from alignment at L-elsbetiae_contig14331:897..1115+ (Laminarionema elsbetiae ELsaHSoW15)
GGTAACACTCCCCCGACAGACCTCCTCCAACACGTACCGCACGACGCACC
GCGTGCTGACGTGCTCAGCCTCGGCTGCGGCGATCTTCGAGACCTCCTGT
ACTCTATACTTCTGCACGGAAGGCGGCTGCGGCGGACGCTATCGTTCATG
CTCAACGATTGGGAACCCGCCATTCACGCGAGGAACCTGATTCTCCTGCA
GCTGTTCCTCGACTCTCGCGGTAACACTCCCCCGACAGACCTCCTCCAAC
ACGTACCGCACGACGCACCGCGTGCTGACGTGCTCAGCCTCGGCTGCGGC
GATCTTCGAGACCTCCTGTACTCTATACTTCTGCACGGAAGGCGGCTGCG
GCGGACGCTATCGTTCATGCTCAACGATTGGGAACCCGCCATTCACGCGA
GGAACCTGATTCTCCTGCAGCTGTTCCTCGACTCTCGC
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