mRNA_L-elsbetiae_contig14173.3101.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: D8LL47_ECTSI (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL47_ECTSI) HSP 1 Score: 206 bits (523), Expect = 7.520e-63 Identity = 114/169 (67.46%), Postives = 130/169 (76.92%), Query Frame = 1 Query: 16 GNFARVSCIEKLVLDFVEASPSG-RGCPHHAKGGEGERQSGESNSSGPLSIATEPEHPPARKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVNDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALLQ 519 GNFARVSC+EKLVL+F+ SPS PHH +G E S +++ S ++ EH ARKPQ++SLGAGKDSLFFRLMDRG A +GGY EVDFPAVS WK L+A TP LSAL ND YKLVAADLRD+ LEDAL+ AGVD AAPTIFLAECVLVYMEPA+S ALLQ Sbjct: 69 GNFARVSCMEKLVLEFIGTSPSHPSSVPHHVRGDGDEHPSHKTDCK--ESQSSIEEHL-ARKPQVISLGAGKDSLFFRLMDRGTAASGGYFEVDFPAVSRWKGGLVAKTPILSALANDLYKLVAADLRDITALEDALIIAGVDLAAPTIFLAECVLVYMEPADSGALLQ 234
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A6H5JEL0_9PHAE (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL0_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.400e-52 Identity = 88/110 (80.00%), Postives = 98/110 (89.09%), Query Frame = 1 Query: 190 ARKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVNDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALLQ 519 ARKPQ++SLGAGKDSLFFRLMDRG AP+GGY EVDFPAVS+WK L+A TP LSAL ND YKLVAADLRD+ LEDAL+ AGVD AAPT+FLAECVLVYMEPA+S+ALLQ Sbjct: 28 ARKPQVISLGAGKDSLFFRLMDRGTAPSGGYFEVDFPAVSTWKGGLVAKTPILSALANDLYKLVAADLRDITALEDALIMAGVDLAAPTMFLAECVLVYMEPADSSALLQ 137
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A835YKC0_9STRA (Leucine carboxyl methyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC0_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.150e-24 Identity = 73/174 (41.95%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 16 GNFARVSCIEKLVLDFVEASPSGRGCPHHAKGGEGERQSGESNSSGPLSIATEPEH--PPARK-PQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALV----NDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALL 516 GNFAR++C++K+V F GC + G++Q + P + P PP PQ+VSLGAG D+ FFRL AP GGY E+DFP+ K + +P L L + DLRD + AL+AAG+D APT+ +AECVLVYMEPAESAALL Sbjct: 58 GNFARMACVDKVVRAFC-------GCEALS----GDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALL 220
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: H2Z4V0_CIOSA (Leucine carboxyl methyltransferase 1 n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z4V0_CIOSA) HSP 1 Score: 101 bits (251), Expect = 1.540e-22 Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 193 RKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVND-------------SYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALL 516 +K Q+VSLGAG D+ ++RL + G+ P G Y EVDF V + K R I + P L + ++D +Y+LV+ADLRD+ +LED L++AG+DF PT+FLAECVL+YM P +S+ L+ Sbjct: 73 QKCQIVSLGAGLDTTYWRLHEAGLVPHG-YFEVDFIDVVTRKIRCIGTKPALRSCLSDFETQSDKSCLHCGAYRLVSADLRDILKLEDKLISAGIDFRLPTLFLAECVLIYMAPDKSSNLI 192
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: R7VP74_COLLI (tRNA wybutosine-synthesizing protein 4 (Fragment) n=5 Tax=Columba livia TaxID=8932 RepID=R7VP74_COLLI) HSP 1 Score: 99.4 bits (246), Expect = 5.960e-21 Identity = 59/120 (49.17%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 202 QLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVNDS--------------YKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALLQ 519 Q+VSLGAG DSLFFRL D G+ EVDFP+V+ KA LI +T LSALV ++ YKL+ DL ++ LE AL AG+D APT+F+AE VL YME + S AL+Q Sbjct: 4 QIVSLGAGFDSLFFRLKDMGLLHGAAVYEVDFPSVARQKAALIETTRELSALVGEAGGEELGVVALSGEDYKLLGVDLSELSELERALEGAGLDSGAPTLFIAEVVLTYMENSRSDALIQ 123
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A5N4E2T0_CAMDR (Protein-glutamine gamma-glutamyltransferase Z n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4E2T0_CAMDR) HSP 1 Score: 98.6 bits (244), Expect = 1.250e-20 Identity = 58/126 (46.03%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 184 PPARKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALV---------------NDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALL 516 P AR+ Q+VSLGAG DSL+FR G EVDFP V+ KA I TP L AL + Y+++ DLR + RL+ AL AAG+D AAPT+ LAE VL Y+EPA++AAL+ Sbjct: 78 PGARRAQIVSLGAGSDSLYFRFKTAGHLAVAAVWEVDFPDVARRKAERIRDTPELLALTGPFQSWDPTSTLCFESSDYRILGLDLRQLQRLDQALAAAGLDAAAPTLLLAEAVLTYLEPADAAALI 203
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A7L3NGQ0_9AVES (tRNA wybutosine-synthesizing protein 4 (Fragment) n=1 Tax=Oreotrochilus melanogaster TaxID=689266 RepID=A0A7L3NGQ0_9AVES) HSP 1 Score: 94.7 bits (234), Expect = 1.610e-19 Identity = 59/120 (49.17%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 202 QLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVNDS--------------YKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALLQ 519 Q+VSLGAG DSL+FRL D G+ EVDFP V+S KA LI T LSALV D+ YKL+ DL ++ LE AL AG+D PT+FLAE VL Y+E + S AL+Q Sbjct: 36 QIVSLGAGFDSLYFRLKDVGLLQHTVVCEVDFPVVASQKAALIKGTEELSALVGDTGGEALGAIAFSGKDYKLLGVDLSELSELEKALEEAGMDNEIPTLFLAEVVLTYLENSRSDALVQ 155
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A091HPV1_CALAN (tRNA wybutosine-synthesizing protein 4 (Fragment) n=2 Tax=Calypte anna TaxID=9244 RepID=A0A091HPV1_CALAN) HSP 1 Score: 94.7 bits (234), Expect = 2.470e-19 Identity = 59/120 (49.17%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 202 QLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALVNDS--------------YKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALLQ 519 Q+VSLGAG DSL+FRL D G+ EVDFP V+S KA LI T LSALV D+ YKL+ DL ++ LE AL AG+D PT+FLAE VL Y+E + S AL+Q Sbjct: 30 QIVSLGAGFDSLYFRLKDVGLLQHTVVCEVDFPVVASQKAALIKGTEELSALVGDTGGEALGAIAFSGKDYKLLGVDLSELSELEKALEEAGMDNEIPTLFLAEVVLTYLENSRSDALVQ 149
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: A0A6I9I4X3_VICPA (tRNA wybutosine-synthesizing protein 4 n=5 Tax=Camelidae TaxID=9835 RepID=A0A6I9I4X3_VICPA) HSP 1 Score: 94.7 bits (234), Expect = 2.530e-19 Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 184 PPARKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALV---------------NDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALL 516 P A + Q++SLGAG DSL+FRL G EVDFP V+ KA I TP L AL + Y+++ DLR + RL+ AL AAG+D AAPT+ LAE VL Y+EPA +AAL+ Sbjct: 78 PGAPRAQILSLGAGSDSLYFRLKTAGHLAVAAVWEVDFPDVARRKAERIRDTPELLALTGPFQSWDPTSTLCFESSDYRILGLDLRQLQRLDQALSAAGLDAAAPTLLLAEAVLTYLEPANAAALI 203
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Match: L9JBZ5_TUPCH (tRNA wybutosine-synthesizing protein 4 n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L9JBZ5_TUPCH) HSP 1 Score: 94.4 bits (233), Expect = 3.440e-19 Identity = 56/126 (44.44%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 184 PPARKPQLVSLGAGKDSLFFRLMDRGIAPAGGYLEVDFPAVSSWKARLIASTPTLSALV---------------NDSYKLVAADLRDVGRLEDALVAAGVDFAAPTIFLAECVLVYMEPAESAALL 516 P AR+ Q+VSLGAG DSL+FRL G EVDFP V+ KA IA TP L AL + Y+++ DLR + RL++ L AAG+D A+PT+ LAE VL Y+EP +A L+ Sbjct: 78 PDARRSQIVSLGAGSDSLYFRLKTAGRLTRAAIWEVDFPEVAQRKAERIAETPELCALTRPFQRGDPESALHFESSDYRILGLDLRLLQRLDETLAAAGLDAASPTLLLAEAVLTYLEPDSAADLI 203 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14173.3101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14173.3101.1 >prot_L-elsbetiae_contig14173.3101.1 ID=prot_L-elsbetiae_contig14173.3101.1|Name=mRNA_L-elsbetiae_contig14173.3101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp MSRLSGNFARVSCIEKLVLDFVEASPSGRGCPHHAKGGEGERQSGESNSSback to top mRNA from alignment at L-elsbetiae_contig14173:1902..4516+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14173.3101.1 ID=mRNA_L-elsbetiae_contig14173.3101.1|Name=mRNA_L-elsbetiae_contig14173.3101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2615bp|location=Sequence derived from alignment at L-elsbetiae_contig14173:1902..4516+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14173:1902..4516+ >mRNA_L-elsbetiae_contig14173.3101.1 ID=mRNA_L-elsbetiae_contig14173.3101.1|Name=mRNA_L-elsbetiae_contig14173.3101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig14173:1902..4516+ (Laminarionema elsbetiae ELsaHSoW15)back to top |