mRNA_L-elsbetiae_contig14148.3087.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14148.3087.1
Unique NamemRNA_L-elsbetiae_contig14148.3087.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: D7G3R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R1_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 2.120e-157
Identity = 258/395 (65.32%), Postives = 281/395 (71.14%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGG--TGEDAFHVDWEALESLPHPNELGK-GSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVEEVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYHR 1176
            GKVMGLAPYA+K SP                          TGEDAF+VDWEA+ESLP PN LG+ G G               GL  LGSFYAALA RAQEGLEEAAL FV GLR+RTGE+NVCLCGGVALNSVLNGKIAREAGF RVFVPPCPGDEGVAVGCA+FGWHQRRLLLP S DT                      +  + +              V AG  GS      G LR P+WGRGW++DDVEDEIAEWE WVDVR I GVEEVAQAIADG VV WFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEA++WFE LPPDGSP+MS+TAPA+ GV E+VPAVCHVD SSRLQTV ++++PLYHR
Sbjct:  344 GKVMGLAPYASKSSPPXXXXXXXXXXXXXXXXXXXXXXXXXTGEDAFYVDWEAIESLPRPNGLGQEGDGQDEGDDGSGNE---DGLHGLGSFYAALASRAQEGLEEAALEFVKGLRDRTGEENVCLCGGVALNSVLNGKIAREAGFRRVFVPPCPGDEGVAVGCASFGWHQRRLLLPSSGDTTLSPTDKKNGDPTAVCEEENLTDTPVESGGGGDLEGRPK---VVAGPLGS------GELRTPYWGRGWTEDDVEDEIAEWERWVDVRQINGVEEVAQAIADGKVVAWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEAEDWFEGLPPDGSPYMSLTAPAKPGVAERVPAVCHVDWSSRLQTVTEESSPLYHR 726          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A0G4FRZ2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FRZ2_VITBC)

HSP 1 Score: 252 bits (643), Expect = 2.330e-72
Identity = 171/405 (42.22%), Postives = 206/405 (50.86%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAE--------IPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDD-----VEDEIAEWESWVDVRDIAGVEEVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYHR 1176
            GKVMGLAP+A K   T E        +    RL  G+LLL  +  GG     F V+W+ LESLPH                        G       +A LA R Q  LE AA+  +  L+ERTG +N+CL GGVALNSVLNG+I RE GF+RVF+PP PGDEG+A GCA  G H      P  A                       A AE+  +                          AG    P+ G  ++ D      V DE   W       +   V E AQ +ADG VV WFQG  E GPRALG RS+LADPR+  M   +N +VK RE FRPFAPSV+AEEAD WFEDLP  GSP+MSITA  R   +  VPAVCHVDG++RLQTV +   PL++R
Sbjct:  341 GKVMGLAPWA-KAGSTGEATDMWKGLLDDGFRLMEGNLLLSKEEQGG-----FRVNWDLLESLPHD---------------------CLGTDPTFMSFAPLAWRVQRDLENAAMTLIQELKERTGARNLCLVGGVALNSVLNGRICRELGFDRVFIPPFPGDEGIAFGCAMAGLHHFIRKQPAEA-----------------------ARAELETSSV------------------------AGHPVTPYSGYDYTADPEGMDAVLDEYKHWIVTQRYTESEIVAETAQLLADGKVVAWFQGGAEMGPRALGHRSILADPRNKTMVDFLNKEVKHREAFRPFAPSVIAEEADGWFEDLPECGSPYMSITAAVREERRGLVPAVCHVDGTARLQTVRESDEPLFYR 671          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A835ZBM7_9STRA (Carbamoyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM7_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.700e-70
Identity = 129/288 (44.79%), Postives = 160/288 (55.56%), Query Frame = 1
Query:  355 KNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIA--------------GVEEVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYHR 1176
            +N+CLCGGV LNSVLNGKI RE GF+RV +P  PGDEG+++GCAA+                                        +   DN  A                        L   F G+ WS +++ED +A++  W+DV D+                 +  A  +A G VV WFQGR EFGPRALG RSLLADPRD +M  RIN  VK REDFRPFAPSVL E A EWF+ L  DGSP+MS+T PA+ G +E++PAVCHVDGSSR+QTV++ A PLYHR
Sbjct:   17 QNLCLCGGVVLNSVLNGKITREGGFDRVHIPNHPGDEGISIGCAAY----------------------------------------VLGCDNACAF-----------------------LLSSFQGKDWSTEEIEDALADFAPWIDVEDLTTQDPDSPGDTPLEVAADRAAAMVASGKVVAWFQGRSEFGPRALGHRSLLADPRDKDMVNRINLKVKMREDFRPFAPSVLEEFAGEWFDGLTGDGSPYMSLTVPAKPGKREQIPAVCHVDGSSRIQTVQQAANPLYHR 241          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A3M2ADF0_9BACT (PqqD family peptide modification chaperone n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2ADF0_9BACT)

HSP 1 Score: 235 bits (600), Expect = 1.870e-67
Identity = 156/383 (40.73%), Postives = 192/383 (50.13%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVEEVAQAIAD-GHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTV 1146
            GKVMGLAP+A +  P      P  L  G L            +   +DW  LES PHPNE    +                        YA LA   Q GLEE  L F+  LRERTGE+N+CL GGVALNS LNG+IARE GF+RVFVPP PGD+G+AVGCA +G H+ R    P A +P                                                            P  G    ++++   +AE   WV+          A A  D G VV W++G  EFGPRALG+RS+LADPR PEM  RINA +KKRE FRPFAP+VLAEEAD WF  + P  SP+MS+T P R    E++PAV HVDG++R+QT+
Sbjct:  237 GKVMGLAPWAERWDPDGR---PRPLLRGPL------------EELAIDWSRLESEPHPNEWEDEARRPA--------------------YARLAADLQLGLEEVVLDFLRRLRERTGERNLCLAGGVALNSTLNGRIARECGFDRVFVPPWPGDDGIAVGCALWGRHRLRPEAAP-ARSPW----------------------------------------------------------FPLLGAKPEEEEIAAALAEAADWVEATHCDQPAAAAAAALDAGEVVAWYRGPAEFGPRALGNRSILADPRRPEMVDRINAAIKKREAFRPFAPTVLAEEADAWFAGVTP--SPYMSLTVPVRPERAERIPAVVHVDGTARIQTL 523          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A353FJN8_9BACT (Carbamoyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A353FJN8_9BACT)

HSP 1 Score: 234 bits (597), Expect = 4.180e-67
Identity = 149/398 (37.44%), Postives = 194/398 (48.74%), Query Frame = 1
Query:    1 GKVMGLAPY------AAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVEEVA-QAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYH 1173
            GKVMGLAP+      A  RS         ++ SG L            +A +VDWE L+SLPH N+    +                       FYA LA   Q  LE+  L F+  LRE+TGE+N+CLCGGVALNS LNG+I REAGF+ VF+PP PGD+G+A+GCA FG  +     PP A                                                               P  GR + +  + + + E E W++   I      A  A+ADG +VGWFQGR EFGPRALG+R +LADPRDP+   R+N+ +KKRE FRPFAP+VL EEA++WF       SP+MSIT       K  +PAV   DG++R+QT+    +P  H
Sbjct:  237 GKVMGLAPWDDVWNGAENRSE--------KVMSGPL------------EALNVDWERLKSLPHGNKWADKNNH--------------------GFYAKLANEVQSDLEDIVLDFLIRLREKTGERNICLCGGVALNSTLNGRIVREAGFDNVFIPPWPGDDGIAMGCAWFGLEKLNSCPPPKASP------------------------------------------------------------GPLLGRSFDEPVIAEALKEVEPWIETEAIKEPANAAGTALADGEMVGWFQGRSEFGPRALGARCILADPRDPKAAERLNSAIKKREAFRPFAPAVLEEEAEKWFPGA--TTSPYMSITVTVAEDCKSSIPAVVAADGTARIQTLGVNESPALH 532          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A2A4PGL3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A4PGL3_9BACT)

HSP 1 Score: 233 bits (593), Expect = 1.530e-66
Identity = 156/395 (39.49%), Postives = 200/395 (50.63%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVR---DIAGVEEVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYHR 1176
            GKVMG+AP+A +    A   AP  +  G L                V+WE L S P   + G+                    ++     AALA   Q  LE+ AL F+ GLRE++GEKN+CL GGVALN  +NG+IAREAGFE VF+PP PGDEG+A+GCA FG H     L P A                                                               PF G  +++ D   +I E+E+WV+     D+      A+A++ G VV WFQGR EFG RALG+RS+LADPRD  M  RIN+ +KKRE FRPFAP+VLAE AD+WFE   P  S +MS TA  R+   +KVPAV HVDGSSR+QT+++   P + R
Sbjct:  239 GKVMGMAPWAPQ---WAAQQAPDWVMRGPLA------------ELEVNWERLRSAPQAXQWGE--------------------EDARPMQAALAADVQRDLEQIALDFLRGLREQSGEKNICLVGGVALNCAMNGRIAREAGFENVFIPPWPGDEGLAIGCALFGHH----YLHPRAQARRTPF-------------------------------------------------------TPFLGTEFTEQDQLADINEFEAWVECYLSDDVVAA--TAEALSKGEVVAWFQGRAEFGQRALGNRSILADPRDGGMIERINSAIKKREGFRPFAPTVLAEHADDWFES--PGSSDYMSRTAQCRS---DKVPAVTHVDGSSRIQTLDENTNPRFRR 532          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A7C7H7B7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7H7B7_9BACT)

HSP 1 Score: 227 bits (578), Expect = 2.610e-64
Identity = 148/394 (37.56%), Postives = 196/394 (49.75%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVEE---VAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYH 1173
            GKVMG+AP+A   +   +           +L G  +D         VDW+ L + PHPN     S                        YA+LA   Q  LE   L  +  LR +TG KN+   GGV+LNS LNG+I REAGFE+VF+P  PGD+G+AVGCAAF + Q      P                        T +  +                                   P+ G  +S DD+E+ + EW+ WV+  D+ G++    VA+AI  G VV WF GR EFGPRALG+RS+LADPR   M  +IN+ +KKRE +RPFAPSVLA++  +WFED  P  SP+MS+T  AR+   E++PAV H DGSSRLQ+V     P Y+
Sbjct:  237 GKVMGMAPWAKDWNKNYQHQP--------ILSGDLND-------LKVDWQRLRNEPHPNAWDDASKRGA--------------------YASLAADMQSDLENVMLEHLQDLRAKTGAKNLIFVGGVSLNSTLNGRIHREAGFEQVFIPHYPGDQGLAVGCAAFAYAQLNAQQLP------------------------TPQQSL----------------------------------TPYSGVEYSNDDIEEALTEWQDWVEEADLDGLDVLDVVAEAIDSGKVVAWFDGRSEFGPRALGNRSILADPRRGAMVEKINSAIKKREAYRPFAPSVLADKVSDWFEDDSP--SPYMSLTVQARSEKAEQIPAVVHADGSSRLQSVTASDNPKYY 535          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A2A5DF29_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A5DF29_9BACT)

HSP 1 Score: 223 bits (569), Expect = 6.100e-63
Identity = 147/394 (37.31%), Postives = 195/394 (49.49%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVE---EVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYH 1173
            GKVMGLAP+A+      E          S++ G   D         +DW+ L   PHPN   +                    ++  + YA LA   Q  LE+  L F+   RE +G+  +  CGGVALNS LNG+I REAGF+ VF+PP PGDEG+AVGCA +G HQ                                      A D+ + +A                         P+ GR     D +D   E+ +W++  D+   E    VA A+AD  VV WF G  EFGPRALG+RS+LADPRD E   RIN  +KKRE FRPFAP+VL E A +WF ++ P  SP+MS+T   + G  E++PAV HVDG++R+QT+E+ A P YH
Sbjct:  243 GKVMGLAPWASDWDAGGERT--------SVMHGPLED-------LQIDWKRLREEPHPNGWAE--------------------EKHRAKYARLAEDLQRDLEDVVLDFLQRQREASGKTKMAFCGGVALNSTLNGRIHREAGFDEVFIPPYPGDEGIAVGCAFYGLHQL-------------------------------------AKDDGRELAPQRKP------------------ISPYGGRAPEASDFQDAHNEYGAWLEEADLGNAELISVVADALADNQVVAWFDGPAEFGPRALGNRSILADPRDGENIGRINTAIKKREAFRPFAPTVLNEHAADWFVNVTP--SPYMSLTVAVKEGKGEQIPAVVHVDGTARIQTLEQAAHPQYH 544          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A2E1H304_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1H304_9BACT)

HSP 1 Score: 222 bits (565), Expect = 1.920e-62
Identity = 144/394 (36.55%), Postives = 196/394 (49.75%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDIAGVE---EVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYH 1173
            GKVMG+AP A++ +   +           +L GG  D         +DW+ L +  +PN+                             YA+LA   Q  LE   L  +  LR +TG KN+   GGVALNS LNG+I REAGFE+VF+P  PGD+G+AVGCAAF + Q   L  P+                                   +A++                         P+ G  ++  D    + +W+ W++  ++ G +     AQAI DG ++ WF GR EFGPRALG+RS+LADPR  EM  RIN+ +KKRE +RPFAPSVLAE+  EWF+D  P  SP+MS+T  ARAG  EK+PAV H DGSSR+QT+ +     Y+
Sbjct:  236 GKVMGMAPLASEWNKDYKHQP--------ILSGGLDD-------LVIDWQRLRNASNPNQWDDKKNRGA--------------------YASLAADMQNDLETVMLEKLRDLRAKTGAKNLIFVGGVALNSTLNGRIHREAGFEQVFIPHYPGDQGLAVGCAAFAYAQLNNLQLPTPQ---------------------------------QALS-------------------------PYSGVAYTDGDTAAALNDWQDWIEEAELEGTDIADVTAQAINDGQIIAWFDGRSEFGPRALGNRSILADPRRGEMVERINSAIKKRESYRPFAPSVLAEKVREWFDDASP--SPYMSLTVQARAGKAEKIPAVVHADGSSRIQTLSENDNAKYY 534          
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Match: A0A2E1VNI2_9BACT (Carbamoyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VNI2_9BACT)

HSP 1 Score: 220 bits (561), Expect = 1.090e-61
Identity = 151/411 (36.74%), Postives = 197/411 (47.93%), Query Frame = 1
Query:    1 GKVMGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALESLPHPNELGKGSGXXXXXXXXXXXXXXSGLQELGSFYAALAGRAQEGLEEAALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPGDEGVAVGCAAFGWHQRRLLLPPSADTPXXXXXXXXXXXXXXXXXXGTAEAEIPAADNNKAMAAXXXXGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVEDEIAEWESWVDVRDI--AG-------------------VEEVAQAIADGHVVGWFQGRGEFGPRALGSRSLLADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFMSITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLY 1170
            GKVMGLAP+  +    A  PAP  L  G L            +   V+WE L + P P                       G + L +    LA R Q+ LE   L ++  LRE+TG +N+CL GGVALNS  NG+IAREAGFE+VF+PP PGD+GVA+GCA +G H       P                                                             A   P+ G   ++D +ED    +  W++  ++  AG                   V+  A A+A G  VGWFQGR EFGPRALG+RS+LA P +  M  RINA +KKRE FRPFAP+VLAE A EWF ++ P  SP MS+T  A     E++PAV HVDGS+R+QT++++A PLY
Sbjct:  242 GKVMGLAPWLERWGSQAGAPAP--LLRGPL------------EELQVNWEQLAAAPLPGAWSAAQ---------------EGDEALRAVATDLAARVQQDLEAVLLDWLVRLREQTGSRNLCLVGGVALNSTANGRIAREAGFEQVFIPPWPGDDGVAIGCALYGHHALHRDAAPRR-----------------------------------------------------------ACWAPYLGGAATQDALEDAWDSYGPWLEREELDQAGCAPPPAQQDEAWLAEAQPRVQAAATALAAGETVGWFQGRSEFGPRALGNRSILATPTEAGMIERINAAIKKREGFRPFAPTVLAEHAAEWFPEVTP--SPAMSLTVDAAPDRAEQIPAVVHVDGSARIQTLDQEANPLY 562          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14148.3087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3R1_ECTSI2.120e-15765.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4FRZ2_VITBC2.330e-7242.22Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A835ZBM7_9STRA3.700e-7044.79Carbamoyltransferase-domain-containing protein n=1... [more]
A0A3M2ADF0_9BACT1.870e-6740.73PqqD family peptide modification chaperone n=1 Tax... [more]
A0A353FJN8_9BACT4.180e-6737.44Carbamoyltransferase n=1 Tax=Planctomycetes bacter... [more]
A0A2A4PGL3_9BACT1.530e-6639.49Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C7H7B7_9BACT2.610e-6437.56Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2A5DF29_9BACT6.100e-6337.31Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E1H304_9BACT1.920e-6236.55Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E1VNI2_9BACT1.090e-6136.74Carbamoyltransferase n=1 Tax=Planctomycetes bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14148contigL-elsbetiae_contig14148:1327..4213 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.6
Seed ortholog evalue4.6e-131
Seed eggNOG ortholog2880.D7G3R1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Carbamoyltransferase C-terminus
EggNOG OGs2RKTV@2759,COG2192@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1179
Cds size1170
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14148.3087.1prot_L-elsbetiae_contig14148.3087.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14148 1327..4204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815562.345381-CDS-L-elsbetiae_contig14148:1326..15371622815562.345381-CDS-L-elsbetiae_contig14148:1326..1537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 1327..1537 -
1691682961.116832-CDS-L-elsbetiae_contig14148:1326..15371691682961.116832-CDS-L-elsbetiae_contig14148:1326..1537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 1327..1537 -
1622815562.3565025-CDS-L-elsbetiae_contig14148:2396..25481622815562.3565025-CDS-L-elsbetiae_contig14148:2396..2548Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 2397..2548 -
1691682961.129015-CDS-L-elsbetiae_contig14148:2396..25481691682961.129015-CDS-L-elsbetiae_contig14148:2396..2548Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 2397..2548 -
1622815562.3698964-CDS-L-elsbetiae_contig14148:2759..31551622815562.3698964-CDS-L-elsbetiae_contig14148:2759..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 2760..3155 -
1691682961.1375394-CDS-L-elsbetiae_contig14148:2759..31551691682961.1375394-CDS-L-elsbetiae_contig14148:2759..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 2760..3155 -
1622815562.3812563-CDS-L-elsbetiae_contig14148:3793..42041622815562.3812563-CDS-L-elsbetiae_contig14148:3793..4204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 3794..4204 -
1691682961.1459286-CDS-L-elsbetiae_contig14148:3793..42041691682961.1459286-CDS-L-elsbetiae_contig14148:3793..4204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14148 3794..4204 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815562.3924453-UTR-L-elsbetiae_contig14148:4204..42131622815562.3924453-UTR-L-elsbetiae_contig14148:4204..4213Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14148 4205..4213 -
1691682961.1543717-UTR-L-elsbetiae_contig14148:4204..42131691682961.1543717-UTR-L-elsbetiae_contig14148:4204..4213Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14148 4205..4213 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14148.3087.1

>prot_L-elsbetiae_contig14148.3087.1 ID=prot_L-elsbetiae_contig14148.3087.1|Name=mRNA_L-elsbetiae_contig14148.3087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MGLAPYAAKRSPTAEIPAPPRLTSGSLLLGGKSDGGTGEDAFHVDWEALE
SLPHPNELGKGSGGGGDDDDSGGGGGGSGLQELGSFYAALAGRAQEGLEE
AALAFVAGLRERTGEKNVCLCGGVALNSVLNGKIAREAGFERVFVPPCPG
DEGVAVGCAAFGWHQRRLLLPPSADTPTPGGEEERDAAADDDAAAGTAEA
EIPAADNNKAMAAAAAAGVGAGAAGSAGLARAGALRVPFWGRGWSKDDVE
DEIAEWESWVDVRDIAGVEEVAQAIADGHVVGWFQGRGEFGPRALGSRSL
LADPRDPEMPARINADVKKREDFRPFAPSVLAEEADEWFEDLPPDGSPFM
SITAPARAGVKEKVPAVCHVDGSSRLQTVEKQAAPLYHR*
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mRNA from alignment at L-elsbetiae_contig14148:1327..4213-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14148.3087.1 ID=mRNA_L-elsbetiae_contig14148.3087.1|Name=mRNA_L-elsbetiae_contig14148.3087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2887bp|location=Sequence derived from alignment at L-elsbetiae_contig14148:1327..4213- (Laminarionema elsbetiae ELsaHSoW15)
GGCAAGGTGATGGGGCTTGCCCCGTACGCGGCAAAGCGGTCCCCGACCGC CGAGATTCCCGCGCCCCCGCGACTGACCTCCGGGTCACTGCTGCTGGGCG GCAAGAGCGACGGCGGCACCGGCGAGGACGCCTTCCACGTCGACTGGGAG GCCCTCGAGAGCCTGCCCCACCCGAACGAGCTCGGCAAGGGGAGCGGCGG CGGCGGCGATGACGACGACAGCGGCGGCGGCGGCGGCGGAAGTGGCCTGC AGGAGCTGGGGTCGTTCTACGCGGCGCTGGCGGGCAGGGCGCAGGAGGGC CTGGAGGAGGCCGCCCTGGCGTTCGTGGCCGGGCTGCGGGAGAGGACCGG GGAGAAGAACGTGTGCCTCTGCGGGGGCGTCGCGCTGAACAGCGTGCTCA ACGGGAAGATTGCCCGAGAGGTGCGTTCGTGGGCGTGGGCGTGAGCCTGG GCGTGAGCCTGGGCGTGGGCGTGGGCGTGGGCGTCGTGGGCATCGTGGGC GCGCCCTCCGTTTGGGGGTTGAAACGCAGGGGGAAGTGGGGTGTGAATAG GCCGGAAAGGGTGTTTGTTTGCTGCCCATATTTGCATCAGCCGTCTCGTT GTTTCCCTCTCGGGAAGCAGCGCTTTCCACGGACCAGAAGAAGAACATAT TTATGACAAACACTCTATCTTCTATTATTCCCTTTTTACAGAAGTTGTGG GCGCGCCCCCTCAGAAGTTGTTGCGTGCCCCCCCCCCGGGGGGTCCGACT TCTTTTGCGGCGCTTCGACTGCTGCTGCTGCTGCTGCTGCTGCTGCTACT GCTGCTGCTGCTGCTGCCGCAAAGGCACGGCTGCTATTTTACGCCCGTGC CTGTCGCCGCAACCAACCAACAACCGCTTCTTAAAGTCACAAAACACAAA ACAAAATGAACGAAAAACACACACACACAAGCGTGCCTACAACAACAGCA TCAAGTCCCCCGTGGAGCGGCTGCTTCTCAGGTTGTGAACGTATATGCAA CAGTGGTAGTTAGACAGACCGCTAACGTTTTGCAGAACATTTGTTTTTAT AAACACAGGCGGGCTTCGAGCGCGTGTTCGTCCCCCCCTGCCCCGGCGAC GAGGGAGTTGCCGTCGGCTGCGCGGCGTTCGGCTGGCACCAGCGCCGGCT CCTCCTCCCGCCAAGCGCCGACACCCCGACCCCGGGAGGAGAGGAGGAGA GAGACGCCGCCGCCGATGATGATGCCGCAGCCGGAACCGCCGAGGCCGAG ATCCCCGCGGCCGACAACAACAAGGCCATGGCAGCGGCGGCGGCGGCGGG GGTGGGGGCAGGGGCGGCAGGTTCGGCAGGTTTGGCAAGGGCGGGGGCGC TGCGGGTGCCGTTCTGGGGCAGGGGTTGGAGCAAGGACGACGTGGAGGAC GAGATCGCAGAGTGGGAGAGCTGGGTGGACGTCCGGGACATTGCAGGGGT GGAGGTGCGCGCGCGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGACGCGGGTTGG CTCGGTCGCCAAGCCTCTTTTCCGGCGAGTCCACCCCCCCCCCCCCCACG AATGCTCGCTTTGTCGTTCTCTGCTCTCGGCATCGGTTTTCCCCGCACGC ACGATACACGCGCAGGAGGTAGCCCAGGCCATCGCCGACGGGCACGTGGT CGGTTGGTTCCAGGGGCGGGGAGAGTTCGGCCCCCGCGCGCTCGGCTCTC GCTCGCTGCTGGCAGACCCGAGAGATCCGGAGATGCCGGCGAGAATCAAC GCCGACGTCAAGAAGAGGTTAGGGGCGAGCCGGGGCGGGCCGGTGTTGGG TTGGGTTGGGTTGGGTTGGGTTGGGTTGGGGGCGGTAGGATTGTTTGGCA GCACGCCGATTGTTGCTGCTGTCGTTGTGGCGATGGTGGTGGCGATGGTG CTTGCCTATCATCTGAACCGGATGCAGTATACTATTATATTTTTGCCTTG TGTGTGCAGGGCAGCACCACAAACACCGCTCCTGTTGCTTGTTCTTACGT GAAGACTCTTTGTCCGAAGAAGGATGAAGTCGATCACTTCTGCCGTTCGC GCCGTTGTAGAACTGCAGGCGCGCGTACCATCCCTTGTTGAGCTTTTGTC AACCATGAGCCCTGTCAAAATCATCCTTCCCGCAGCCGACCATCCGTTTT CTTTTTTTTCTGTTTTAAGCTTTTCAAGCGGTGTAGTGATGGGAATGGGT GTATAGGTGCTTCCGAGCGTCATCCTGTTGCGTTGCGTTACGCTATACTG TAACGCGTATTATTATTATTGTATGCATACTGTAAATAACGTGAAGCCGT CCAACAACACACAAACAGCAACAACGATAACCTCGACAACAACAACATCA ACAAACAAACAAACAGCAGCAAAAAAAAAAATAACAACAACTACATCACC AACAACAGCATCAACAACAGCAAACACAACATCAAAACGAACAGCACCAC CACCACCACCACCAACAACAACAACAACAACAACAACAACAAGAACAGCA ACACCAACAATTTCAAACAATTTCAACAGCAACACGAACAATTTCAACAA CAAACAACAACAACAACAACAACAACAACAACAACAACAACAACACCAAC AACAACAACAACAACAACGTGCACAGGGAAGACTTCCGACCGTTCGCGCC GAGCGTGCTCGCCGAAGAGGCCGACGAGTGGTTCGAGGACCTGCCGCCGG ACGGGTCTCCCTTCATGTCCATCACGGCGCCCGCGAGGGCCGGGGTTAAG GAGAAGGTGCCAGCTGTTTGCCACGTGGACGGGTCTTCGAGGCTGCAGAC CGTGGAGAAGCAGGCGGCTCCGCTGTATCATAGGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14148:1327..4213-

>mRNA_L-elsbetiae_contig14148.3087.1 ID=mRNA_L-elsbetiae_contig14148.3087.1|Name=mRNA_L-elsbetiae_contig14148.3087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2340bp|location=Sequence derived from alignment at L-elsbetiae_contig14148:1327..4213- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGCTTGCCCCGTACGCGGCAAAGCGGTCCCCGACCGCCGAGATTCC
CGCGCCCCCGCGACTGACCTCCGGGTCACTGCTGCTGGGCGGCAAGAGCG
ACGGCGGCACCGGCGAGGACGCCTTCCACGTCGACTGGGAGGCCCTCGAG
AGCCTGCCCCACCCGAACGAGCTCGGCAAGGGGAGCGGCGGCGGCGGCGA
TGACGACGACAGCGGCGGCGGCGGCGGCGGAAGTGGCCTGCAGGAGCTGG
GGTCGTTCTACGCGGCGCTGGCGGGCAGGGCGCAGGAGGGCCTGGAGGAG
GCCGCCCTGGCGTTCGTGGCCGGGCTGCGGGAGAGGACCGGGGAGAAGAA
CGTGTGCCTCTGCGGGGGCGTCGCGCTGAACAGCGTGCTCAACGGGAAGA
TTGCCCGAGAGATGGGGCTTGCCCCGTACGCGGCAAAGCGGTCCCCGACC
GCCGAGATTCCCGCGCCCCCGCGACTGACCTCCGGGTCACTGCTGCTGGG
CGGCAAGAGCGACGGCGGCACCGGCGAGGACGCCTTCCACGTCGACTGGG
AGGCCCTCGAGAGCCTGCCCCACCCGAACGAGCTCGGCAAGGGGAGCGGC
GGCGGCGGCGATGACGACGACAGCGGCGGCGGCGGCGGCGGAAGTGGCCT
GCAGGAGCTGGGGTCGTTCTACGCGGCGCTGGCGGGCAGGGCGCAGGAGG
GCCTGGAGGAGGCCGCCCTGGCGTTCGTGGCCGGGCTGCGGGAGAGGACC
GGGGAGAAGAACGTGTGCCTCTGCGGGGGCGTCGCGCTGAACAGCGTGCT
CAACGGGAAGATTGCCCGAGAGGCGGGCTTCGAGCGCGTGTTCGTCCCCC
CCTGCCCCGGCGACGAGGGAGTTGCCGTCGGCTGCGCGGCGTTCGGCTGG
CACCAGCGCCGGCTCCTCCTCCCGCCAAGCGCCGACACCCCGACCCCGGG
AGGAGAGGAGGAGAGAGACGCCGCCGCCGATGATGATGCCGCAGCCGGAA
CCGCCGAGGCCGAGATCCCCGCGGCCGACAACAACAAGGCCATGGCAGCG
GCGGCGGCGGCGGGGGTGGGGGCAGGGGCGGCAGGTTCGGCAGGTTTGGC
AAGGGCGGGGGCGCTGCGGGTGCCGTTCTGGGGCAGGGGTTGGAGCAAGG
ACGACGTGGAGGACGAGATCGCAGAGTGGGAGAGCTGGGTGGACGTCCGG
GACATTGCAGGGGTGGAGGCGGGCTTCGAGCGCGTGTTCGTCCCCCCCTG
CCCCGGCGACGAGGGAGTTGCCGTCGGCTGCGCGGCGTTCGGCTGGCACC
AGCGCCGGCTCCTCCTCCCGCCAAGCGCCGACACCCCGACCCCGGGAGGA
GAGGAGGAGAGAGACGCCGCCGCCGATGATGATGCCGCAGCCGGAACCGC
CGAGGCCGAGATCCCCGCGGCCGACAACAACAAGGCCATGGCAGCGGCGG
CGGCGGCGGGGGTGGGGGCAGGGGCGGCAGGTTCGGCAGGTTTGGCAAGG
GCGGGGGCGCTGCGGGTGCCGTTCTGGGGCAGGGGTTGGAGCAAGGACGA
CGTGGAGGACGAGATCGCAGAGTGGGAGAGCTGGGTGGACGTCCGGGACA
TTGCAGGGGTGGAGGAGGTAGCCCAGGCCATCGCCGACGGGCACGTGGTC
GGTTGGTTCCAGGGGCGGGGAGAGTTCGGCCCCCGCGCGCTCGGCTCTCG
CTCGCTGCTGGCAGACCCGAGAGATCCGGAGATGCCGGCGAGAATCAACG
CCGACGTCAAGAAGAGGAGGTAGCCCAGGCCATCGCCGACGGGCACGTGG
TCGGTTGGTTCCAGGGGCGGGGAGAGTTCGGCCCCCGCGCGCTCGGCTCT
CGCTCGCTGCTGGCAGACCCGAGAGATCCGGAGATGCCGGCGAGAATCAA
CGCCGACGTCAAGAAGAGGGAAGACTTCCGACCGTTCGCGCCGAGCGTGC
TCGCCGAAGAGGCCGACGAGTGGTTCGAGGACCTGCCGCCGGACGGGTCT
CCCTTCATGTCCATCACGGCGCCCGCGAGGGCCGGGGTTAAGGAGAAGGT
GCCAGCTGTTTGCCACGTGGACGGGTCTTCGAGGCTGCAGACCGTGGAGA
AGCAGGCGGCTCCGCTGTATCATAGGTAAGGAAGACTTCCGACCGTTCGC
GCCGAGCGTGCTCGCCGAAGAGGCCGACGAGTGGTTCGAGGACCTGCCGC
CGGACGGGTCTCCCTTCATGTCCATCACGGCGCCCGCGAGGGCCGGGGTT
AAGGAGAAGGTGCCAGCTGTTTGCCACGTGGACGGGTCTTCGAGGCTGCA
GACCGTGGAGAAGCAGGCGGCTCCGCTGTATCATAGGTAA
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