mRNA_L-elsbetiae_contig1407.3034.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1407.3034.1
Unique NamemRNA_L-elsbetiae_contig1407.3034.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: D8LJQ2_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ2_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 1.240e-145
Identity = 208/294 (70.75%), Postives = 227/294 (77.21%), Query Frame = 3
Query:    3 PDGVVKLKDKTIPVIEQ----------------------------------------EHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            P G VKLKDKT PVIEQ                                        EH R+NVKM R AHD+WGISKIVLV+CDDFLKRVYTFPW+ +PEWK+ALQPVLDVLGIPEEKMVRC+LASMPPGCVIPVHHD GHWV+H+HRVHVA+VTDV+E           VDF VGPDP+HM KVMFDEGRVVE NNQAKHAVTN WSR+ VHLILDYVDEY LDFV+L+PG+KLVQTRRSIDVEGL  R+GP+PAF+VLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW
Sbjct:   21 PSGQVKLKDKTTPVIEQVAKEQLDPEARPLVFTRGRADLSLLKLLLSSRGASIWTDEEHDRTNVKMTRPAHDKWGISKIVLVFCDDFLKRVYTFPWYHEPEWKEALQPVLDVLGIPEEKMVRCLLASMPPGCVIPVHHDTGHWVQHTHRVHVAVVTDVSE-----------VDFLVGPDPKHMRKVMFDEGRVVEFNNQAKHAVTNRWSRNRVHLILDYVDEYPLDFVRLAPGSKLVQTRRSIDVEGLVTRQGPDPAFVVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 303          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A6H5KXX9_9PHAE (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX9_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 5.190e-140
Identity = 188/229 (82.10%), Postives = 205/229 (89.52%), Query Frame = 3
Query:   78 MKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            M R AHD+WGISKIVLV+CDDFLKRVYTFPW+ +PEWK+ALQPVLDVLGIPEEKMVRC+LASMPPGCVIPVHHD GHWV+H+HRVHVA+VTDV E           VDFFVGPDP+HM KVMFDEGRVVELNNQAKHAVTN WSRD VHLILDYVDEY L+FV+L+PG+KL QTRRSIDVEGL  R GP+PAF++LGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW
Sbjct:    1 MARPAHDKWGISKIVLVFCDDFLKRVYTFPWYHEPEWKEALQPVLDVLGIPEEKMVRCLLASMPPGCVIPVHHDTGHWVQHTHRVHVAVVTDVRE-----------VDFFVGPDPKHMRKVMFDEGRVVELNNQAKHAVTNRWSRDRVHLILDYVDEYPLEFVRLAPGSKLAQTRRSIDVEGLVTRHGPDPAFVILGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 218          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A6G6CDK9_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDK9_SACJA)

HSP 1 Score: 405 bits (1041), Expect = 6.380e-139
Identity = 197/294 (67.01%), Postives = 222/294 (75.51%), Query Frame = 3
Query:    3 PDGVVKLKDKTIPVIEQ----------------------------------------EHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            PDG+VKLKDK +PV+EQ                                        EHARSNVK+ R AHDRWGI KIV VY DDFLK+VYTFPWF  PEW+QALQPVLDVLGIPE K++RC+LASMPPGCVIPVHHD G WV+H+HR+HVA+ TDVAE           VDFFVG D ++M KVM DEGRVVELNNQAKHAVTNGWSR+ VHLILDYV++Y LD V+LSPG KLVQTRRSIDV+G++KREGP+PAFI++GGQKCGTTLLYECLNQHPLVARG RRETHFFDW
Sbjct:   20 PDGLVKLKDKRVPVVEQVAEDRLDPEARPMVFTRGRVDVSLLQHLLSSKGDAVWTDEEHARSNVKLTRPAHDRWGIGKIVFVYSDDFLKKVYTFPWFHDPEWRQALQPVLDVLGIPEGKVMRCLLASMPPGCVIPVHHDTGLWVQHTHRIHVAVTTDVAE-----------VDFFVGADVDNMRKVMMDEGRVVELNNQAKHAVTNGWSRNRVHLILDYVEDYPLDVVRLSPGTKLVQTRRSIDVKGVSKREGPDPAFIIIGGQKCGTTLLYECLNQHPLVARGGRRETHFFDW 302          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A835YZ41_9STRA (Sulfotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ41_9STRA)

HSP 1 Score: 302 bits (773), Expect = 2.260e-96
Identity = 148/256 (57.81%), Postives = 177/256 (69.14%), Query Frame = 3
Query:   48 EQEHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGP-----------------NPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            E  HAR NV++ R AHDRWG+ K VLVYCDDFLK VY FPW+++  W+ A+ PVL VLG+P E++VRC+LASMPPGC IPVHHD G+WVKH+HR+H+A+ T            P KV F VGP  + M  V F EG V+ELNNQAKHAV N W R  VHLILDYV+++ +  +QL PGA+L QTRRSID+  L+  EG                   PAFIV+G QKCGTT +YE LNQHPLV R RRRETHFFDW
Sbjct:   86 EAAHARDNVRITRPAHDRWGVRKAVLVYCDDFLKGVYGFPWWREERWRAAVAPVLRVLGVPRERVVRCLLASMPPGCDIPVHHDTGYWVKHTHRIHMAVHT-----------CPGKVRFRVGPTADAMRDVAFAEGEVIELNNQAKHAVRNDWDRHRVHLILDYVEDHPVRALQLPPGARLAQTRRSIDL--LSAAEGAXXXXXXXXXXXXXXXATGPAFIVIGAQKCGTTSMYEYLNQHPLVLRSRRRETHFFDW 328          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S3XTL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTL4_HETAK)

HSP 1 Score: 272 bits (696), Expect = 1.280e-85
Identity = 128/235 (54.47%), Postives = 160/235 (68.09%), Query Frame = 3
Query:   60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            AR NV + R AHD WGI K+V V+CDD+LKRVY  PWF +PEW+Q L P+   +G+  EK+VRC+LAS+PPG  IP HHD GHWV+ +HRVHVA+ T               V F  GPD  +M++V FDEGRVVELNNQ+KH V NGW +   HLI DYV+++ L+ VQL PG  L QTRR++D    A    P P+++++G QK GTT LYE L QH LV R RRRE H+FDW
Sbjct:   17 ARHNVGLTRPAHDNWGIRKVVFVFCDDYLKRVYELPWFHRPEWRQHLDPIFQGIGLQPEKLVRCLLASIPPGVTIPPHHDTGHWVRFTHRVHVAVATH------------QDVVFRCGPDESNMARVSFDEGRVVELNNQSKHYVHNGWDQYRTHLIFDYVEDFPLERVQLQPGEALTQTRRTVDRAAEAGAR-PVPSYLIIGAQKAGTTSLYEHLCQHALVLRARRREAHYFDW 238          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S3HEI2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEI2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.040e-80
Identity = 134/248 (54.03%), Postives = 165/248 (66.53%), Query Frame = 3
Query:   48 EQEHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDL--VHLILDYVDEY-LLDFVQLSPGAKLVQTRRSIDVEG------LAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            E E+   NV++ R AHD WGI KIV  +CDDFL +V  FPW Q PEW++ L  V   +GI E K+VR +LAS+PPG  IPVHHD G+WVKH+HR H+AIVT               + F VGP PE M +  FDEGR+VELNNQAKH VTNG S D   VHLI DYVD++ +     L PG K+ QTRRSID+E       + +R+ P   F+++G QKCGTT +YE L QHPLV RG+RRETH+FDW
Sbjct:   77 EDENQMGNVRITRPAHDAWGIKKIVFNFCDDFLLKVLDFPWSQLPEWRELLSSVYAAMGIDESKVVRSLLASIPPGVTIPVHHDTGYWVKHTHRCHLAIVTH------------KDIVFKVGPTPELMKRYSFDEGRIVELNNQAKHFVTNG-SADTHRVHLIFDYVDDHPIKQRFLLQPGEKVYQTRRSIDLEREVQDAEVERRKAPT--FVIIGAQKCGTTSMYEYLCQHPLVVRGKRRETHYFDW 309          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: W7U713_9STRA (Sulfotransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U713_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.840e-79
Identity = 127/250 (50.80%), Postives = 163/250 (65.20%), Query Frame = 3
Query:   18 KLKDKTIPVIEQEHA-RSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            KL D    + ++E+A ++NV + R +HD WGI KIV +YCDDFL+R +  PWF  PEW+  L PV   L +    +VRC+LASMPPG  IP HHD G+WV +SHR+H+ I TD           P ++ F VGP  + + +    EG +VELNNQAKH+V N W R  VHLILDY+++  ++   L PGAKL QTRRSID+E       P P+F++LG QK GTT LYE L QHPLV R RRRETH+ DW
Sbjct:  113 KLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQALLLPVFQALNVAPRMVVRCLLASMPPGIAIPPHHDTGYWVHYSHRIHLPIETD-----------PARIVFRVGPSKDRLQRYDLPEGCLVELNNQAKHSVDNLWDRSRVHLILDYLEKDSIERSILPPGAKLHQTRRSIDLES-EHGSRPCPSFLILGAQKSGTTSLYEYLCQHPLVLRARRRETHYLDW 350          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A4D9D757_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D757_9STRA)

HSP 1 Score: 255 bits (651), Expect = 4.290e-74
Identity = 127/252 (50.40%), Postives = 163/252 (64.68%), Query Frame = 3
Query:   18 KLKDKTIPVIEQEHA-RSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPN--PAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            KL D    + ++E+A ++NV + R +HD WGI KIV +YCDDFL+R +  PWF  PEW+  L PV   L +    +VRC+LASMPPG  IP HHD G+WV +SHR+H+ I TD           P ++ F VGP  + + +    EG +VELNNQAKH+V N W R  VHLILDY+++  ++   L PGAKL QTRRSID+E      G    P+F++LG QK GTT LYE L QHPLV R RRRETH+ DW
Sbjct:  444 KLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQALLLPVFQALNVAPRMVVRCLLASMPPGIAIPPHHDTGYWVHYSHRIHLPIETD-----------PARIVFRVGPSKDRLQRYDLPEGCLVELNNQAKHSVDNLWDRSRVHLILDYLEKDSIERSILPPGAKLHQTRRSIDLES---EHGSRSCPSFLILGAQKSGTTSLYEYLCQHPLVLRARRRETHYLDW 681          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S1ZMC1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMC1_TRICV)

HSP 1 Score: 237 bits (604), Expect = 1.390e-73
Identity = 118/238 (49.58%), Postives = 156/238 (65.55%), Query Frame = 3
Query:   60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQ-PEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLL--DFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            A++NV + R +HD WGI K+ L++CDDFL+ VY  PW+   P  + A++P+L+ LG+P  ++VR +LAS+PPG  IPVHHD G WV+H+HRVH  ++ D           P ++ F  GP  + M ++    G V E+NNQAKHAV+N   R  VHLILDYVDE     +  +LSPG KL+QTRRSID E +       P F++LG QK GTT +Y+ LNQHPLV R RRRETH  DW
Sbjct:   81 AQNNVHVVRPSHDAWGIKKVCLIFCDDFLRDVYEMPWWHSNPAMRDAVRPILEALGVPPSRLVRLLLASLPPGVTIPVHHDTGEWVRHTHRVHCPVLVDD----------PERILFRCGPSEDAMDRIDCLPGHVFEMNNQAKHAVSNCSDRHRVHLILDYVDESFAVRNRHRLSPGEKLLQTRRSIDRE-IDAGARLAPTFLILGAQKAGTTSMYDYLNQHPLVVRARRRETHNLDW 307          
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S4J6G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6G4_9STRA)

HSP 1 Score: 232 bits (592), Expect = 8.790e-70
Identity = 124/244 (50.82%), Postives = 159/244 (65.16%), Query Frame = 3
Query:   60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPE---WKQALQPVLDVLG-IPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHV-AIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLD--FVQLSPGAKLVQTRRSIDVEGLAKREG--PNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764
            A++NV + R +HD WGI KI L++CDDFL+ VY  PW+        ++A++P+L+ LG +P E++VR +LAS+PPG  IPVHHD G WV+H+HRVHV  IVTD           P +V F  GP  + M +V  + G V ELNNQ KHAV+N      VHLILDYVDE       V+L  G +L+QTRRSID    A+ EG  P P++++LG QK GTT LYE L QHPLV R +RRETH  DW
Sbjct:   30 AQNNVHVTRPSHDAWGIKKIALIFCDDFLRDVYEMPWYHSKSSSAMREAVEPILEALGNVPRERIVRLILASLPPGITIPVHHDTGEWVRHTHRVHVPVIVTD-----------PSRVLFRCGPREDSMMRVECNPGHVFELNNQGKHAVSNCSDEHRVHLILDYVDESFPSPRRVKLERGERLLQTRRSID---RARDEGSRPCPSYLILGAQKAGTTSLYEYLTQHPLVVRAKRRETHNLDW 259          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJQ2_ECTSI1.240e-14570.75Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KXX9_9PHAE5.190e-14082.10Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
A0A6G6CDK9_SACJA6.380e-13967.01Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
A0A835YZ41_9STRA2.260e-9657.81Sulfotransferase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S3XTL4_HETAK1.280e-8554.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HEI2_9STRA1.040e-8054.03Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
W7U713_9STRA4.840e-7950.80Sulfotransferase n=1 Tax=Nannochloropsis gaditana ... [more]
A0A4D9D757_9STRA4.290e-7450.40Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1ZMC1_TRICV1.390e-7349.58Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4J6G4_9STRA8.790e-7050.82Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1407contigL-elsbetiae_contig1407:10452..13472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.2
Seed ortholog evalue1.2e-52
Seed eggNOG ortholog2880.D8LJQ2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
EggNOG OGs2CN6N@1,2QU6N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size765
Cds size336
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1407.3034.1prot_L-elsbetiae_contig1407.3034.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1407 10452..11236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.60787-CDS-L-elsbetiae_contig1407:10451..106701622815557.60787-CDS-L-elsbetiae_contig1407:10451..10670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1407 10452..10670 -
1691682958.302849-CDS-L-elsbetiae_contig1407:10451..106701691682958.302849-CDS-L-elsbetiae_contig1407:10451..10670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1407 10452..10670 -
1622815557.6364515-CDS-L-elsbetiae_contig1407:11119..112361622815557.6364515-CDS-L-elsbetiae_contig1407:11119..11236Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1407 11120..11236 -
1691682958.3136377-CDS-L-elsbetiae_contig1407:11119..112361691682958.3136377-CDS-L-elsbetiae_contig1407:11119..11236Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1407 11120..11236 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.6542041-UTR-L-elsbetiae_contig1407:11236..113021622815557.6542041-UTR-L-elsbetiae_contig1407:11236..11302Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 11237..11302 -
1691682958.3230395-UTR-L-elsbetiae_contig1407:11236..113021691682958.3230395-UTR-L-elsbetiae_contig1407:11236..11302Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 11237..11302 -
1622815557.6775496-UTR-L-elsbetiae_contig1407:11617..117851622815557.6775496-UTR-L-elsbetiae_contig1407:11617..11785Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 11618..11785 -
1691682958.3326118-UTR-L-elsbetiae_contig1407:11617..117851691682958.3326118-UTR-L-elsbetiae_contig1407:11617..11785Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 11618..11785 -
1622815557.6943247-UTR-L-elsbetiae_contig1407:12199..123401622815557.6943247-UTR-L-elsbetiae_contig1407:12199..12340Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 12200..12340 -
1691682958.3452504-UTR-L-elsbetiae_contig1407:12199..123401691682958.3452504-UTR-L-elsbetiae_contig1407:12199..12340Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 12200..12340 -
1622815557.7048635-UTR-L-elsbetiae_contig1407:13419..134721622815557.7048635-UTR-L-elsbetiae_contig1407:13419..13472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 13420..13472 -
1691682958.3572004-UTR-L-elsbetiae_contig1407:13419..134721691682958.3572004-UTR-L-elsbetiae_contig1407:13419..13472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1407 13420..13472 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1407.3034.1

>prot_L-elsbetiae_contig1407.3034.1 ID=prot_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSP
GAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVA
RGRRRETHFFDW
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mRNA from alignment at L-elsbetiae_contig1407:10452..13472-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1407.3034.1 ID=mRNA_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3021bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:10452..13472- (Laminarionema elsbetiae ELsaHSoW15)
CACCGGATGGGGTGGTGAAGCTCAAGGACAAAACTATCCCAGTGATCGAG CAGGTGGGTTTTCGTTGGTGGTCCTGTTTTTTGTCTCGCCAATGGTGTGT GCTCTTGAAGATAAAACAGCGATCAAAGAAGGAACCTCCCCACAACAGAG ACGGGACCCCGTGCGGTGAATTAGCAATTCCCTACATTGATTGCTCTTAT TTGAAAGAACTTATTTGGGTTGTGCCCTGCTTGATGTGTTCGTCTGGACC GTTGAGGCCAGAGCGTAAATACCATGGATTGTCGAAGGCCTGCTCAAGTA CTAGTGATGGCATGATGGGGTCGTGAGGTATTTTTCTCCTTCTCGCTTTC ACACACCCAGCTTTGTTGAAGAGCTCGCGATTTCAATGTAGGTAACAGCA GTAGTCTATACAACAGCAGTGTGTCGAATCCGCCGCCGATGCCGCCCCAC CGTGCAAATTTGTTGTTGCAGCTTTCGTACACCCGGACTCCAACTTCTAT ACCACAAAGTCGGTTGTGCAAGCCTCTTCTGTAGGAGCTACACCAGCATC GTTAAGAGAAGATGAGAAACGACCAACAAGCAGCTCGCGCGAAACAGTAG TCTAAACCTGACCAACCACCAGGCAACGGCGCGTGGCCCGTGTACCGTGA TCATCGGGGTCATCGCACATCCCCTGGACCGACTTTCAGAGTCCAATAAC TCCGTAGCGAAGGGGGTGCCGACCCCAAACGGTACGGTTTCGGGCGGCTA TCGACGAGACCTTCCCAACGCCACCTTTTTCAGCACCGACAAAGCTATTG TTGTGAATTAATCTAGTGGTGTGTGACGTACGCCAGGCCACCGACTGACC AGCGAGGAGACATGTCTTTCAGGTGTCGCCTCAGCAGGTGACCGTCCGGC CTGTATAGCTTCGTAGCGTGCGCTCGCTCGTGCGGCACCGCGGCCTCGCT TCGCACGGCGTGCAGATCGCTGCGCTGCTGCCCCGGCGCACCGGTCGAGT GGTTGCGCTGCGCTATTGTCTCTGTTGTGCTAGATTGTCGGTGCTGTTGT CATGCGGCCACGCGGTCGACCTGCCCCCTCGTTTTGTGCCTGTTTTCGTT TTTGCCTTCGTGTCCTATGTGTGCACGTAAAGGAGCACGCGCGGAGCAAC GTGAAGATGAAACGGCAGGCGCACGACCGGTGGGGCATCTCGAAGATCGT GCTGGTGTACTGCGACGACTTCCTCAAGAGGGTCTACACCTTCCCGTGGT TCCAACAGCCCGAGTGGAAGCAGGTACACACGCACACGAACCCGTGCTTT GCCACAACACCACCTCTTGATGGTGTAAAATCTTAACCGTTGGATTTGCG GAGTCAAATCTTCCTCCCGCGTCGTCACTCTCTCAAAGCGTGTGTGCAGG TTGGGCCATCCGCGTGAGTCTTTTTACACCGATCCCGTCCTAGTCCTCTC GAACGCGGACAGCAGTAGTTTGCTCTCGTCTTGAACAGGGAAGGGGCAAG AGCTTGTCGCCATCTCAGCCGAGTTTTACGTCTGCTCAGCTGGTGGTCCG CCACCTGAAGCTCCGCAGTTATTTGTGGAGCAGTACCCCCCGTCTCCAAT TTGACACTTCCCGTCTCCAATTTGACACTTTTCACTCTGTCTCTCTCCGC TACTTTTCCCCGCTTTCGCCCCTCGTCCCCGATGTAGGCCTTGCAGCCCG TTTTGGACGTGCTGGGCATCCCGGAGGAGAAGATGGTGCGCTGCATGCTG GCTTCCATGCCCCCCGGCTGCGTCATCCCTGTCCACCACGACATGGGTCA CTGGGTGAAGCATTCCCACCGCGTGCACGTCGCGATTGTCACCGACGTTG CGGAGGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTTTGTG TGTGAAGGGGCGAGATTGCCTGCAGCAGATGGGGATGCGGGTACATTGGA AGCCTCGTGTGGTTTCTGCGAAAAGCTGGCGCGCTTTTCCCTTGCAATCG TACGCCGCAGGTAGTTTAGATGGACAGACGACGGGCGAAGATCTTGGCTG GCTTTTCCAGGAGCTTACGGGCCTGACCATGATATGTCCTGAAACAAACT CGCCCCCTTTCTCTGCCCATAGCGGTCGCCGCGCCACCGTACGATTTCCT CCCCTGTTCTTTACACCAAGGCCCAAGGGAGCTGTTGTTGACTCCCCCCC AAGGTGGATTTTTTCGTGGGGCCGGATCCGGAGCACATGAGCAAGGTCAT GTTCGATGAGGGACGGGTGGTGGAGCTCAACAACCAGGCGAAGCACGCCG TCACCAACGGGTGGTCGCGGGATCTCGTCCACCTCATCCTCGATTACGTA GATGTGAGTGGCGTCGTATTGTTGTCATTTAATTCGTATGTTTTTTTTTC TGCGTGTTTTTGGCGAAAGGCATGGCTGGCTGGCGGGGGGGCGGCGCTCG CCGAATGTCAGCTTTTTCGAGGGTCTTCTCCTCCTCCTTGATTGCGTTGT GTTGCGACACGGGTCGAGGGCTGTTGTCTTCGAGTTTGGGTGTCGACACC TGAATTCGTCAAGGCAGCCGAGAGATCAACGGCAAAAACCCAGCCTCTTG TCATTCTCTCCAGTACAGAAACGGCGGGAGGTCGGTCGATGCGGGTTGCG TCCCGGACACCACAACGGCGTCGAATTTATAGACAAGACCTGAAACAACA CGTATCGAGACCGGCCTGACATAACTCGCGCAATGTTCATGTTTTACACT TTGCTGTTGATGCCCCCCCCCCCCAATCCGACCACGCAACATCCAAACGC AGGAGTATCTCCTGGACTTCGTGCAGCTGTCCCCGGGGGCGAAGCTCGTG CAGACGCGGCGGAGCATAGACGTGGAGGGCCTGGCGAAACGGGAGGGCCC CAACCCGGCCTTCATCGTCCTCGGGGGGCAGAAGTGCGGGACGACCCTGC TGTACGAGTGCCTCAACCAGCACCCGCTCGTCGCGCGGGGCCGGCGGCGA GAGACGCACTTCTTCGACTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1407:10452..13472-

>mRNA_L-elsbetiae_contig1407.3034.1 ID=mRNA_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:10452..13472- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCAAGGTCATGTTCGATGAGGGACGGGTGGTGGAGCTCAACAACCA
GGCGAAGCACGCCGTCACCAACGGGTGGTCGCGGGATCTCGTCCACCTCA
TCCTCGATTACGTAGATATGAGCAAGGTCATGTTCGATGAGGGACGGGTG
GTGGAGCTCAACAACCAGGCGAAGCACGCCGTCACCAACGGGTGGTCGCG
GGATCTCGTCCACCTCATCCTCGATTACGTAGATGAGTATCTCCTGGACT
TCGTGCAGCTGTCCCCGGGGGCGAAGCTCGTGCAGACGCGGCGGAGCATA
GACGTGGAGGGCCTGGCGAAACGGGAGGGCCCCAACCCGGCCTTCATCGT
CCTCGGGGGGCAGAAGTGCGGGACGACCCTGCTGTACGAGTGCCTCAACC
AGCACCCGCTCGTCGCGCGGGGCCGGCGGCGAGAGACGCACTTCTTCGAC
TGGGAGTATCTCCTGGACTTCGTGCAGCTGTCCCCGGGGGCGAAGCTCGT
GCAGACGCGGCGGAGCATAGACGTGGAGGGCCTGGCGAAACGGGAGGGCC
CCAACCCGGCCTTCATCGTCCTCGGGGGGCAGAAGTGCGGGACGACCCTG
CTGTACGAGTGCCTCAACCAGCACCCGCTCGTCGCGCGGGGCCGGCGGCG
AGAGACGCACTTCTTCGACTGG
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